MGE detailed information
MGE type: Mobilizable plasmid MGE length: 63392 bp
Accession: NZ_CP021205 Location: 1..63392 Organism: Escherichia coli strain Z1002 Replicon: plasmid p1002-MCR1
Accession: NZ_CP021205 Location: 1..63392 Organism: Escherichia coli strain Z1002 Replicon: plasmid p1002-MCR1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA268_RS28545 () | 722..1254 | + | 533 | Protein_1 | sigma 54-interacting transcriptional regulator | - |
| CA268_RS28550 () | 1247..2881 | + | 1635 | Protein_2 | Outer membrane lipoprotein BfpB | VF |
| CA268_RS28555 () | 2919..4239 | + | 1321 | Protein_3 | type 4b pilus protein PilO2 | - |
| CA268_RS28560 () | 4223..4717 | + | 495 | WP_000912553.1 | hypothetical protein | VF |
| CA268_RS28565 () | 4742..6280 | + | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| CA268_RS28570 () | 6271..7379 | + | 1109 | Protein_6 | type II secretion system F family protein | - |
| CA268_RS28575 () | 7424..7981 | + | 558 | WP_000095048.1 | hypothetical protein | - |
| CA268_RS28580 () | 8047..8529 | + | 483 | WP_001258095.1 | hypothetical protein | VF |
| CA268_RS28585 () | 8533..9168 | + | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| CA268_RS28590 () | 9181..10338 | + | 1158 | WP_086352866.1 | hypothetical protein | VF |
| CA268_RS28600 () | 10799..10996 | + | 198 | WP_001356717.1 | hypothetical protein | - |
| CA268_RS28610 () | 11597..12721 | + | 1125 | WP_000486716.1 | site-specific integrase | - |
| CA268_RS28615 () | 12733..13386 | + | 654 | WP_170852113.1 | hypothetical protein | - |
| CA268_RS28620 () | 13433..13948 | + | 516 | WP_000698398.1 | thermonuclease family protein | - |
| CA268_RS28625 () | 14043..15719 | + | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| CA268_RS28630 () | 15889..16464 | + | 576 | WP_001303470.1 | hypothetical protein | - |
| CA268_RS28635 () | 16469..18358 | + | 1890 | Protein_17 | DNA topoisomerase 3 | - |
| CA268_RS28640 () | 18413..19626 | + | 1214 | WP_164523141.1 | IS3 family transposase IS629 | Transposase |
| CA268_RS28645 () | 19666..19947 | + | 282 | Protein_19 | topoisomerase C-terminal repeat-containing protein | - |
| CA268_RS28650 () | 20016..20222 | + | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| CA268_RS30735 () | 20568..21008 | + | 441 | WP_000666084.1 | hypothetical protein | - |
| CA268_RS28660 () | 20967..21740 | - | 774 | WP_052234578.1 | PAP2 family protein | - |
| CA268_RS28665 () | 21812..23437 | - | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| CA268_RS28670 () | 23658..27971 | - | 4314 | WP_034169409.1 | hypothetical protein | - |
| CA268_RS28675 () | 27968..28309 | - | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| CA268_RS28680 () | 28677..29078 | + | 402 | WP_021575837.1 | hypothetical protein | - |
| CA268_RS28685 () | 29096..29848 | + | 753 | WP_063078685.1 | conjugal transfer protein TraL | - |
| CA268_RS28690 () | 29850..30557 | + | 708 | WP_021503228.1 | hypothetical protein | - |
| CA268_RS28695 () | 30577..30903 | + | 327 | WP_063078684.1 | hypothetical protein | - |
| CA268_RS28700 () | 31034..31471 | - | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| CA268_RS28705 () | 31496..31678 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| CA268_RS28710 () | 32236..32418 | + | 183 | WP_001481829.1 | hypothetical protein | - |
| CA268_RS28715 () | 32525..32791 | - | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| CA268_RS28720 () | 33211..33489 | - | 279 | WP_000545938.1 | hypothetical protein | - |
| CA268_RS28735 () | 34039..34290 | - | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| CA268_RS28740 () | 34280..34540 | - | 261 | WP_000702247.1 | hypothetical protein | Toxin Detail |
| CA268_RS28745 () | 34592..34816 | - | 225 | WP_000814381.1 | hypothetical protein | - |
| CA268_RS28750 () | 34913..35122 | - | 210 | WP_000866036.1 | hypothetical protein | - |
| CA268_RS28755 () | 35164..35487 | - | 324 | WP_000427403.1 | hypothetical protein | - |
| CA268_RS28765 () | 36069..36398 | - | 330 | WP_000855120.1 | hypothetical protein | - |
| CA268_RS28775 () | 36996..37661 | + | 666 | WP_000532148.1 | P-loop NTPase | - |
| CA268_RS30825 () | 37735..38019 | + | 285 | WP_001162371.1 | hypothetical protein | - |
| CA268_RS28785 () | 38037..38633 | - | 597 | WP_000125165.1 | hypothetical protein | - |
| CA268_RS28790 () | 38854..39042 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| CA268_RS28795 () | 39052..40251 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| CA268_RS28800 () | 40471..40632 | - | 162 | WP_000775236.1 | type I toxin-antitoxin system Hok family toxin | - |
| CA268_RS28825 () | 42231..43259 | - | 1029 | WP_001175213.1 | replication initiation protein | - |
| CA268_RS28830 () | 44345..44851 | + | 507 | WP_001326595.1 | CaiF/GrlA family transcriptional regulator | - |
| CA268_RS28835 () | 44844..45059 | + | 216 | WP_001127357.1 | DUF1187 family protein | - |
| CA268_RS30740 () | 45052..45228 | + | 177 | WP_000753050.1 | hypothetical protein | - |
| CA268_RS28840 () | 45255..46208 | + | 954 | WP_072089442.1 | SPFH/Band 7/PHB domain protein | - |
| CA268_RS28850 () | 46582..47025 | + | 444 | WP_000964330.1 | NfeD family protein | - |
| CA268_RS30745 () | 47029..47199 | + | 171 | WP_000550720.1 | hypothetical protein | - |
| CA268_RS28855 () | 47210..47656 | + | 447 | WP_001243165.1 | hypothetical protein | - |
| CA268_RS28860 () | 47689..47946 | + | 258 | WP_001542015.1 | hypothetical protein | - |
| CA268_RS28865 () | 47927..48229 | + | 303 | WP_001360345.1 | hypothetical protein | - |
| CA268_RS28870 () | 48226..48483 | + | 258 | WP_000739144.1 | hypothetical protein | - |
| CA268_RS28875 () | 48487..49482 | + | 996 | WP_001028543.1 | type IV secretion system protein | - |
| CA268_RS28880 () | 49488..50129 | + | 642 | WP_001425343.1 | hypothetical protein | VF |
| CA268_RS28885 () | 50131..50385 | + | 255 | WP_001043555.1 | EexN family lipoprotein | - |
| CA268_RS28890 () | 50398..50685 | + | 288 | WP_001032611.1 | EexN family lipoprotein | - |
| CA268_RS28895 () | 50758..51393 | + | 636 | WP_015059536.1 | hypothetical protein | - |
| CA268_RS28900 () | 51493..51744 | + | 252 | WP_000121741.1 | hypothetical protein | Antitoxin Detail |
| CA268_RS28905 () | 51734..52015 | + | 282 | WP_000638823.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CA268_RS28910 () | 52083..52382 | + | 300 | WP_000835764.1 | IncN plasmid KikA protein | - |
| CA268_RS28915 () | 52385..53620 | + | 1236 | WP_015059538.1 | hypothetical protein | VF |
| CA268_RS28920 () | 53626..54063 | + | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| CA268_RS28925 () | 54182..54580 | + | 399 | WP_001153665.1 | hypothetical protein | - |
| CA268_RS28930 () | 54601..55185 | + | 585 | WP_001177113.1 | Type IV secretion system protein virB1 | VF |
| CA268_RS28935 () | 55287..55475 | + | 189 | WP_050567133.1 | hypothetical protein | - |
| CA268_RS28940 () | 55546..55866 | + | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| CA268_RS28945 () | 55872..58229 | + | 2358 | WP_063078682.1 | VirB4 family type IV secretion system protein | - |
| CA268_RS28955 () | 58395..59129 | + | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| CA268_RS28960 () | 59195..59896 | + | 702 | WP_000274524.1 | Type IV secretion system protein PtlF | VF |
| CA268_RS28965 () | 59886..61025 | + | 1140 | WP_000790640.1 | Type IV secretion system protein virB10 | VF |
| CA268_RS28970 () | 61044..62099 | + | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|