NZ_CP0212031..183508

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 183508 bp
Accession: NZ_CP021203        Location: 1..183508         Organism: Escherichia coli strain Z1002       Replicon: plasmid p1002-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CA268_RS26680 () 37..382 + 346 Protein_0 QacE family quaternary ammonium compound efflux SMR transporter -
CA268_RS26685 () 376..1214 + 839 Protein_1 sulfonamide-resistant dihydropteroate synthase Sul1 -
CA268_RS26695 () 1342..1545 + 204 WP_000376616.1 hypothetical protein -
CA268_RS26700 () 1701..2900 + 1200 Protein_3 chromate efflux transporter -
CA268_RS26705 () 2911..3216 + 306 WP_000130000.1 PadR family transcriptional regulator -
CA268_RS30650 () 3260..3325 + 66 Protein_5 EAL domain-containing protein -
CA268_RS26715 () 3443..4207 + 765 WP_001389365.1 IS6-like element IS6100 family transposase -
CA268_RS26725 () 4701..5285 - 585 WP_001137892.1 TetR family transcriptional regulator -
CA268_RS26730 () 5285..6521 - 1237 Protein_8 MFS transporter -
CA268_RS26735 () 6518..7423 - 906 WP_000219391.1 Mph(A) family macrolide 2'-phosphotransferase -
CA268_RS26745 () 7545..8249 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
CA268_RS26755 () 8384..8479 + 96 WP_013362819.1 23S rRNA methyltransferase attenuation leader peptide -
CA268_RS26760 () 8605..9342 + 738 WP_013362818.1 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) -
CA268_RS30655 () 9287..9457 + 171 WP_170852050.1 rRNA adenine methyltransferase -
CA268_RS26765 () 9972..10421 + 450 WP_013362817.1 hypothetical protein -
CA268_RS30660 () 10382..10723 + 342 WP_023909256.1 chaperonin -
CA268_RS26775 () 10950..12482 + 1533 WP_013362816.1 IS91 family transposase -
CA268_RS26785 () 12637..13341 - 705 WP_001067834.1 IS6-like element IS26 family transposase -
CA268_RS26790 () 13612..14109 + 498 WP_072196854.1 phage tail protein -
CA268_RS26795 () 14115..14726 - 612 WP_000367942.1 tail fiber assembly protein -
CA268_RS26800 () 14726..15152 - 427 Protein_20 tail fiber protein -
CA268_RS26805 () 15192..15620 - 429 WP_023156927.1 phage tail protein -
CA268_RS26810 () 15631..16116 - 486 WP_032245979.1 phage tail protein -
CA268_RS26815 () 16145..16621 - 477 WP_064764636.1 phage tail protein -
CA268_RS26820 () 16631..17059 - 429 WP_085701450.1 phage tail protein -
CA268_RS26825 () 17131..17703 + 573 WP_001165547.1 recombinase family protein -
CA268_RS26835 () 18139..18402 + 264 WP_000145199.1 hypothetical protein -
CA268_RS26840 () 18477..18806 + 330 WP_000887652.1 holin -
CA268_RS26845 () 18803..19246 + 444 WP_000580776.1 hypothetical protein -
CA268_RS26850 () 19233..19835 + 603 WP_001345482.1 hypothetical protein -
CA268_RS26855 () 19837..21756 + 1920 WP_086352858.1 hypothetical protein -
CA268_RS26860 () 21753..22118 + 366 WP_000175491.1 hypothetical protein -
CA268_RS26865 () 22131..25118 + 2988 WP_086352859.1 hypothetical protein -
CA268_RS26870 () 25108..25416 + 309 WP_001165937.1 hypothetical protein -
CA268_RS26875 () 25620..25991 + 372 WP_099368671.1 hypothetical protein -
CA268_RS26880 () 26199..27554 - 1356 WP_000148486.1 deoxyguanosinetriphosphate triphosphohydrolase family protein -
CA268_RS26885 () 27803..28291 - 489 WP_000068872.1 single-stranded DNA-binding protein -
CA268_RS26890 () 28461..29018 + 558 WP_001345478.1 lysozyme -
CA268_RS30665 () 29011..29259 + 249 WP_024187336.1 hypothetical protein -
CA268_RS26900 () 29304..30323 - 1020 WP_000132937.1 head processing protein -
CA268_RS26905 () 30436..31566 + 1131 WP_001312284.1 helix-turn-helix domain-containing protein -
CA268_RS26910 () 31599..33320 - 1722 WP_025210446.1 hypothetical protein -
CA268_RS26915 () 33396..40163 + 6768 WP_060578233.1 N-6 DNA methylase -
CA268_RS26920 () 40197..40637 + 441 WP_000224043.1 hypothetical protein -
CA268_RS26925 () 40634..40882 + 249 WP_000747846.1 hypothetical protein -
CA268_RS26930 () 40919..42046 - 1128 WP_000526244.1 RelA/SpoT domain-containing protein -
CA268_RS26935 () 42149..42790 - 642 WP_023351534.1 hypothetical protein -
CA268_RS26940 () 42980..43540 - 561 WP_023356281.1 Ref family protein -
CA268_RS26945 () 43787..44098 - 312 WP_001224234.1 hypothetical protein -
CA268_RS26950 () 44149..45180 - 1032 WP_000067530.1 site-specific integrase -
CA268_RS26955 () 45188..45409 - 222 WP_000542336.1 hypothetical protein -
CA268_RS26970 () 46006..46215 + 210 WP_000874156.1 hypothetical protein -
CA268_RS26975 () 46326..47177 + 852 WP_000611664.1 hypothetical protein -
CA268_RS26980 () 47210..48328 - 1119 WP_032246984.1 phage antirepressor KilAC domain-containing protein -
CA268_RS30800 () 48325..48889 - 565 Protein_54 host cell division inhibitor Icd-like protein -
CA268_RS26995 () 48886..50370 - 1485 WP_000124159.1 hypothetical protein -
CA268_RS27000 () 50370..51563 - 1194 WP_060578234.1 hypothetical protein -
CA268_RS27005 () 51649..52101 - 453 WP_001326849.1 late promoter-activating protein -
CA268_RS27010 () 52190..53233 - 1044 WP_029393260.1 DUF968 domain-containing protein -
CA268_RS27015 () 53261..53440 - 180 WP_000113018.1 hypothetical protein -
CA268_RS27020 () 53445..53825 - 381 WP_001216045.1 type II toxin-antitoxin system death-on-curing family toxin Toxin Detail
CA268_RS27025 () 53825..54046 - 222 WP_001190712.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
CA268_RS27030 () 54229..55785 + 1557 WP_060578235.1 type I restriction-modification system subunit M -
CA268_RS27035 () 55782..57026 + 1245 WP_086352860.1 restriction endonuclease subunit S -
CA268_RS27040 () 57148..60264 + 3117 WP_072650946.1 HsdR family type I site-specific deoxyribonuclease -
CA268_RS27045 () 60530..61036 - 507 WP_060578216.1 hypothetical protein -
CA268_RS27050 () 61109..62371 - 1263 WP_001774489.1 hypothetical protein -
CA268_RS27060 () 62673..63374 - 702 WP_032162337.1 hypothetical protein -
CA268_RS27065 () 63371..64048 - 678 WP_001354545.1 metallophosphoesterase -
CA268_RS27070 () 64045..64671 - 627 WP_000484107.1 hypothetical protein -
CA268_RS27075 () 64569..65231 - 663 WP_012817939.1 hypothetical protein -
CA268_RS27080 () 65173..65328 - 156 WP_000095380.1 hypothetical protein -
CA268_RS27085 () 65395..65973 - 579 WP_060578240.1 VRR-NUC domain-containing protein -
CA268_RS27090 () 65976..66221 - 246 WP_000840930.1 hypothetical protein -
CA268_RS27095 () 66368..66745 + 378 WP_000235786.1 hypothetical protein -
CA268_RS27100 () 66755..67972 + 1218 WP_001141901.1 hypothetical protein -
CA268_RS27105 () 67976..68704 + 729 WP_000896801.1 hypothetical protein -
CA268_RS27110 () 68691..69476 + 786 WP_060578241.1 hypothetical protein -
CA268_RS27115 () 69478..70494 + 1017 WP_000212025.1 hypothetical protein -
CA268_RS27120 () 70487..71119 + 633 WP_000535203.1 hypothetical protein -
CA268_RS27125 () 71166..72164 - 999 WP_060578242.1 hypothetical protein -
CA268_RS27130 () 72164..73528 - 1365 WP_001276599.1 replicative DNA helicase -
CA268_RS30355 () 74001..74165 - 165 WP_000234831.1 DUF3927 family protein -
CA268_RS27145 () 74165..74590 - 426 WP_000900640.1 tellurite/colicin resistance protein -
CA268_RS27165 () 76148..78412 - 2265 WP_000660972.1 Dam family site-specific DNA-(adenine-N6)-methyltransferase -
CA268_RS27170 () 78409..79314 - 906 WP_000472529.1 recombination-associated protein RdgC -
CA268_RS27175 () 79307..79591 - 285 WP_001177860.1 hypothetical protein -
CA268_RS27185 () 80054..80842 + 789 WP_001569402.1 hypothetical protein -
CA268_RS27190 () 80882..81304 + 423 WP_000007765.1 hypothetical protein -
CA268_RS30670 () 81330..81470 + 141 WP_000336812.1 hypothetical protein -
CA268_RS27195 () 81480..81872 + 393 WP_001281115.1 hypothetical protein -
CA268_RS27200 () 82208..83092 + 885 WP_001113742.1 RepB family plasmid replication initiator protein -
CA268_RS27205 () 83385..84194 + 810 WP_001154687.1 GIY-YIG nuclease family protein -
CA268_RS27210 () 84363..85559 + 1197 WP_001285362.1 AAA family ATPase -
CA268_RS27215 () 85576..86577 + 1002 WP_000038866.1 ParB/RepB/Spo0J family partition protein -
CA268_RS27220 () 86804..88510 + 1707 WP_023153705.1 hypothetical protein -
CA268_RS27225 () 88571..90160 + 1590 WP_000085137.1 hypothetical protein -
CA268_RS27230 () 90170..90985 + 816 WP_000041757.1 hypothetical protein -
CA268_RS27235 () 91021..91602 + 582 WP_000035302.1 hypothetical protein -
CA268_RS27240 () 91614..92123 + 510 WP_000509939.1 hypothetical protein -
CA268_RS27245 () 92295..92891 + 597 WP_000268409.1 hypothetical protein -
CA268_RS27250 () 93074..93319 - 246 WP_001426344.1 hypothetical protein -
CA268_RS27255 () 93370..94215 - 846 WP_024188253.1 hypothetical protein -
CA268_RS27260 () 94245..95045 - 801 WP_001187875.1 phage antirepressor KilAC domain-containing protein -
CA268_RS27265 () 95210..96253 - 1044 WP_023154138.1 phage antirepressor KilAC domain-containing protein -
CA268_RS27270 () 96250..96471 - 222 WP_000245712.1 host cell division inhibitor Icd-like protein -
CA268_RS27280 () 97052..97369 + 318 WP_000908460.1 hypothetical protein -
CA268_RS27285 () 97377..98156 + 780 WP_024166536.1 hypothetical protein -
CA268_RS27290 () 98404..98970 + 567 WP_023153778.1 hypothetical protein -
CA268_RS27295 () 98981..99592 + 612 WP_000523980.1 hypothetical protein -
CA268_RS27300 () 99607..100488 + 882 WP_000926342.1 hypothetical protein -
CA268_RS27305 () 100570..104265 + 3696 WP_089477381.1 transglycosylase SLT domain-containing protein -
CA268_RS27310 () 104265..104621 + 357 WP_000002800.1 hypothetical protein -
CA268_RS27315 () 104618..106051 + 1434 WP_000047924.1 bleomycin hydrolase -
CA268_RS27320 () 106051..106887 + 837 WP_001189832.1 hypothetical protein -
CA268_RS27325 () 106966..107400 + 435 WP_001286325.1 hypothetical protein -
CA268_RS30675 () 107412..108161 + 750 Protein_116 tail fiber protein -
CA268_RS30680 () 108204..108476 + 273 Protein_117 tail fiber protein -
CA268_RS30685 () 108504..108776 + 273 Protein_118 tail fiber protein -
CA268_RS30690 () 108780..109634 + 855 Protein_119 tail fiber protein -
CA268_RS27340 () 109686..110390 - 705 WP_001067834.1 IS6-like element IS26 family transposase -
CA268_RS27350 () 110497..111357 + 861 WP_000557452.1 aminoglycoside N-acetyltransferase AAC(3)-IIe -
CA268_RS27355 () 111370..111912 + 543 WP_002063889.1 AAA family ATPase -
CA268_RS27360 () 112004..113052 + 1049 Protein_123 IS3 family transposase -
CA268_RS27365 () 113106..113810 - 705 WP_001067834.1 IS6-like element IS26 family transposase -
CA268_RS27370 () 113875..116118 - 2244 Protein_125 Tn3-like element Tn3 family transposase -
CA268_RS27375 () 116132..116464 + 333 WP_001393253.1 WbuC family cupin fold metalloprotein -
CA268_RS27380 () 116511..117386 - 876 WP_000239590.1 class A extended-spectrum beta-lactamase CTX-M-15 -
CA268_RS27390 () 117808..118512 - 705 WP_001067858.1 IS6-like element IS26 family transposase -
CA268_RS30695 () 118578..118643 + 66 Protein_129 IS1 family transposase -
CA268_RS27410 () 120092..120326 + 235 Protein_130 type II toxin-antitoxin system RelE/ParE family toxin -
CA268_RS27415 () 120454..120735 + 282 WP_001333089.1 hypothetical protein -
CA268_RS27420 () 120858..121208 - 351 WP_000361389.1 plasmid partitioning/stability family protein -
CA268_RS27425 () 121211..122173 - 963 WP_000959884.1 plasmid segregation protein ParM -
CA268_RS27430 () 122320..122613 + 294 WP_032146011.1 hypothetical protein -
CA268_RS27440 () 122690..123373 + 684 WP_000085883.1 DNA methylase -
CA268_RS27445 () 123374..123595 + 222 WP_001104881.1 hypothetical protein -
CA268_RS27450 () 123609..124043 + 435 WP_000274503.1 DUF1380 family protein -
CA268_RS30700 () 124094..124870 + 777 WP_001383963.1 hypothetical protein -
CA268_RS27465 () 125411..125713 + 303 WP_001671341.1 antirestriction protein -
CA268_RS27470 () 125760..126182 + 423 WP_000271762.1 DUF1380 family protein -
CA268_RS27475 () 126179..126370 + 192 WP_001027493.1 hypothetical protein -
CA268_RS27495 () 127408..127638 + 231 WP_000218642.1 hypothetical protein -
CA268_RS27500 () 127690..129051 + 1362 WP_000170695.1 DUF3560 domain-containing protein -
CA268_RS27505 () 129098..129661 + 564 WP_001298559.1 class I SAM-dependent methyltransferase -
CA268_RS30805 () 129747..130196 - 450 WP_045892832.1 hypothetical protein -
CA268_RS27530 () 130498..131025 + 528 WP_000290834.1 single-stranded DNA-binding protein -
CA268_RS27535 () 131083..131316 + 234 WP_000006003.1 DUF905 family protein -
CA268_RS27540 () 131377..133400 + 2024 Protein_148 ParB/RepB/Spo0J family partition protein -
CA268_RS27545 () 133469..133903 + 435 WP_000845953.1 conjugation system SOS inhibitor PsiB -
CA268_RS27550 () 133900..134619 + 720 WP_001276217.1 plasmid SOS inhibition protein A -
- () 134631..134855 + 225 NuclAT_0 - -
- () 134631..134855 + 225 NuclAT_0 - -
- () 134631..134855 + 225 NuclAT_0 - -
- () 134631..134855 + 225 NuclAT_0 - -
CA268_RS30705 () 134640..134819 - 180 WP_001309233.1 hypothetical protein -
- () 134788..134853 + 66 - - Antitoxin Detail
CA268_RS27560 () 134899..135057 + 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
CA268_RS30810 () 135295..135672 - 378 Protein_153 hypothetical protein -
CA268_RS27580 () 135972..136268 + 297 WP_001272251.1 hypothetical protein -
CA268_RS27585 () 136379..137200 + 822 WP_001234445.1 DUF945 domain-containing protein -
CA268_RS27590 () 137497..138099 - 603 WP_000243713.1 transglycosylase SLT domain-containing protein -
CA268_RS27595 () 138422..138805 + 384 WP_001354030.1 relaxosome protein TraM -
CA268_RS27600 () 138999..139670 + 672 WP_000283561.1 conjugal transfer transcriptional regulator TraJ -
CA268_RS27605 () 139807..140034 + 228 WP_000089263.1 conjugal transfer relaxosome protein TraY -
CA268_RS27610 () 140067..140425 + 359 Protein_160 type IV conjugative transfer system pilin TraA -
CA268_RS27615 () 140440..140751 + 312 WP_000012113.1 type IV conjugative transfer system protein TraL -
CA268_RS27620 () 140773..141339 + 567 WP_000399780.1 type IV conjugative transfer system protein TraE -
CA268_RS27625 () 141326..142054 + 729 WP_001230772.1 type-F conjugative transfer system secretin TraK -
CA268_RS27630 () 142054..143505 + 1452 WP_000146675.1 conjugal transfer protein TraB -
CA268_RS27635 () 143474..144061 + 588 WP_001444176.1 conjugal transfer protein TraP -
CA268_RS27640 () 144000..144368 + 369 WP_001315561.1 conjugal transfer protein TrbD -
CA268_RS27645 () 144365..144880 + 516 WP_000809881.1 type IV conjugative transfer system lipoprotein TraV -
CA268_RS27650 () 145015..145236 + 222 WP_001278683.1 conjugal transfer protein TraR -
CA268_RS27655 () 145229..145705 + 477 WP_000549587.1 hypothetical protein -
CA268_RS27660 () 145785..146003 + 219 WP_000556745.1 hypothetical protein -
CA268_RS30370 () 146031..146378 + 348 WP_000836682.1 hypothetical protein -
CA268_RS27670 () 146504..149134 + 2631 WP_000069777.1 type IV secretion system protein TraC -
CA268_RS27675 () 149131..149517 + 387 WP_000214084.1 type-F conjugative transfer system protein TrbI -
CA268_RS27680 () 149514..150146 + 633 WP_001203728.1 type-F conjugative transfer system protein TraW -
CA268_RS27685 () 150143..151135 + 993 WP_000830838.1 conjugal transfer pilus assembly protein TraU -
CA268_RS27690 () 151165..151470 + 306 WP_000224416.1 hypothetical protein -
CA268_RS27695 () 151479..152117 + 639 WP_001080256.1 type-F conjugative transfer system pilin assembly protein TrbC -
CA268_RS27700 () 152114..153964 + 1851 WP_000821856.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
CA268_RS27705 () 153991..154248 + 258 WP_000864353.1 conjugal transfer protein TrbE -
CA268_RS27710 () 154241..154984 + 744 WP_001030371.1 type-F conjugative transfer system pilin assembly protein TraF -
CA268_RS27715 () 154998..155342 + 345 WP_000556796.1 conjugal transfer protein TrbA -
CA268_RS27720 () 155461..155745 + 285 WP_000624194.1 type-F conjugative transfer system pilin chaperone TraQ -
CA268_RS27725 () 155732..156277 + 546 WP_000059831.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
CA268_RS27730 () 156207..156554 + 348 WP_001309242.1 P-type conjugative transfer protein TrbJ -
CA268_RS27735 () 156502..156927 + 426 WP_001444237.1 F-type conjugal transfer protein TrbF -
CA268_RS27740 () 156914..158287 + 1374 WP_000944331.1 conjugal transfer protein TraH -
CA268_RS27745 () 158284..161106 + 2823 WP_086352862.1 conjugal transfer mating pair stabilization protein TraG -
CA268_RS27750 () 161122..161607 + 486 WP_000605870.1 hypothetical protein -
CA268_RS27755 () 161656..162387 + 732 WP_000782451.1 complement resistance protein TraT -
CA268_RS27760 () 162590..163327 + 738 WP_000199905.1 hypothetical protein -
CA268_RS27765 () 163378..165549 + 2172 WP_023910159.1 type IV conjugative transfer system coupling protein TraD -
CA268_RS27770 () 165549..170819 + 5271 WP_015059148.1 conjugative transfer relaxase/helicase TraI -
CA268_RS27775 () 170839..171585 + 747 WP_000205725.1 conjugal transfer pilus acetylase TraX -
CA268_RS27780 () 171644..172504 + 861 WP_000704523.1 alpha/beta hydrolase -
CA268_RS27785 () 172607..173167 + 561 WP_000139323.1 fertility inhibition protein FinO -
CA268_RS27790 () 173296..173508 + 213 WP_001309245.1 ANR family transcriptional regulator -
CA268_RS27795 () 173753..174214 + 462 WP_001233838.1 thermonuclease family protein -
CA268_RS27800 () 174260..174469 + 210 WP_001298565.1 hemolysin expression modulator Hha -
CA268_RS27805 () 174507..175097 + 591 WP_000766807.1 DUF2726 domain-containing protein -
CA268_RS27810 () 175337..175591 + 255 WP_000083830.1 replication regulatory protein RepA -
CA268_RS27820 () 175829..175903 + 75 WP_001365705.1 RepA leader peptide Tap -
CA268_RS27825 () 175896..176753 + 858 WP_000130646.1 incFII family plasmid replication initiator RepA -
CA268_RS30710 () 177454..177594 + 141 WP_001333237.1 hypothetical protein -
CA268_RS27835 () 177692..178345 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
CA268_RS30375 () 178438..178695 + 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
CA268_RS27840 () 178628..179029 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
CA268_RS27850 () 179278..179693 + 416 Protein_207 IS1 family transposase -
CA268_RS27855 () 179729..180274 - 546 Protein_208 Tn3 family transposase -
CA268_RS27865 () 180340..181044 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
CA268_RS27875 () 181109..181789 - 681 Protein_210 class 1 integron integrase IntI1 -
CA268_RS27880 () 181947..182420 + 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
CA268_RS27885 () 182551..183339 + 789 WP_000503573.1 ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance