MGE detailed information
MGE type: Prophage MGE length: 61810 bp
Accession: NZ_CP021175 Location: 397633..459442 Organism: Escherichia coli strain 5CRE51 Replicon: chromosome
Accession: NZ_CP021175 Location: 397633..459442 Organism: Escherichia coli strain 5CRE51 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA593_RS02055 () | 393436..394506 | - | 1071 | WP_000920172.1 | hypothetical protein | - |
| CA593_RS02060 () | 394484..396190 | - | 1707 | WP_000132880.1 | zinc ribbon domain-containing protein | - |
| CA593_RS02065 () | 396183..397391 | - | 1209 | WP_001087767.1 | type I restriction-modification system subunit M | - |
| CA593_RS02070 () | 397633..398841 | - | 1209 | WP_000772656.1 | Regulatory protein Spx ; Integrase | Integrase |
| CA593_RS02075 () | 399444..400583 | + | 1140 | WP_057077950.1 | hypothetical protein | - |
| CA593_RS02080 () | 401209..401478 | + | 270 | WP_000429347.1 | hypothetical protein | - |
| CA593_RS02085 () | 401616..401978 | - | 363 | WP_000461705.1 | type II toxin-antitoxin system RnlB family antitoxin | Antitoxin Detail |
| CA593_RS02090 () | 401971..403041 | - | 1071 | WP_001730411.1 | type II toxin-antitoxin system RnlA family toxin | Toxin Detail |
| CA593_RS02095 () | 403176..403463 | - | 288 | Protein_372 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| CA593_RS02100 () | 403493..403999 | + | 507 | WP_108084473.1 | hypothetical protein | - |
| CA593_RS02105 () | 404002..404412 | + | 411 | WP_001032316.1 | tail fiber assembly protein | - |
| CA593_RS02110 () | 404393..404626 | - | 234 | WP_001619155.1 | hypothetical protein | - |
| CA593_RS02115 () | 405487..407622 | - | 2136 | Protein_376 | prophage tail fiber N-terminal domain-containing protein | - |
| CA593_RS02120 () | 407687..408286 | - | 600 | WP_001233083.1 | hypothetical protein | VF |
| CA593_RS02125 () | 408357..411854 | - | 3498 | WP_048237154.1 | host specificity protein J | - |
| CA593_RS02130 () | 411915..412562 | - | 648 | WP_047626228.1 | tail assembly protein | - |
| CA593_RS02135 () | 412460..413203 | - | 744 | WP_047626227.1 | C40 family peptidase | - |
| CA593_RS02140 () | 413209..413907 | - | 699 | WP_001152638.1 | phage minor tail protein L | - |
| CA593_RS02145 () | 413907..414236 | - | 330 | WP_000847379.1 | phage tail protein | - |
| CA593_RS02150 () | 414233..416812 | - | 2580 | WP_021548553.1 | phage tail tape measure protein | - |
| CA593_RS02155 () | 416805..417239 | - | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| CA593_RS02160 () | 417221..417643 | - | 423 | WP_021548554.1 | phage minor tail protein G | - |
| CA593_RS02165 () | 417659..418399 | - | 741 | WP_021548555.1 | phage tail protein | - |
| CA593_RS02170 () | 418407..418802 | - | 396 | WP_021548556.1 | phage minor tail U family protein | - |
| CA593_RS02175 () | 418799..419377 | - | 579 | WP_001518407.1 | phage tail protein | - |
| CA593_RS02180 () | 419389..419742 | - | 354 | WP_029395143.1 | head-tail joining protein | - |
| CA593_RS02185 () | 419754..420149 | - | 396 | WP_001468354.1 | DNA-packaging protein FI | - |
| CA593_RS02190 () | 420191..421216 | - | 1026 | WP_029395141.1 | major capsid protein | - |
| CA593_RS02195 () | 421272..421604 | - | 333 | WP_012304872.1 | head decoration protein | - |
| CA593_RS02200 () | 421614..422933 | - | 1320 | WP_029395138.1 | S49 family peptidase | - |
| CA593_RS02205 () | 422914..424515 | - | 1602 | WP_057077926.1 | phage portal protein | - |
| CA593_RS02210 () | 424512..424718 | - | 207 | WP_000198149.1 | gpW family protein | - |
| CA593_RS02215 () | 424715..426640 | - | 1926 | WP_001027321.1 | phage terminase large subunit family protein | - |
| CA593_RS02220 () | 426615..427160 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| CA593_RS02230 () | 427549..427782 | + | 234 | WP_001663509.1 | YlcI/YnfO family protein | - |
| CA593_RS02235 () | 427839..428249 | + | 411 | WP_000079508.1 | DUF1398 family protein | - |
| CA593_RS02245 () | 428601..428753 | - | 153 | WP_001139675.1 | hypothetical protein | - |
| CA593_RS02250 () | 428741..429208 | - | 468 | WP_001341210.1 | lysis protein | - |
| CA593_RS02255 () | 429205..429702 | - | 498 | WP_001135250.1 | lysozyme RrrD | - |
| CA593_RS02260 () | 429702..429917 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| CA593_RS02265 () | 429985..431037 | - | 1053 | WP_000799656.1 | site-specific DNA-methyltransferase | - |
| CA593_RS02270 () | 431188..431391 | - | 204 | WP_000917724.1 | hypothetical protein | - |
| CA593_RS02275 () | 431615..432040 | - | 426 | WP_000217632.1 | hypothetical protein | - |
| CA593_RS02280 () | 432321..433073 | - | 753 | WP_039268527.1 | antitermination protein | - |
| CA593_RS02285 () | 433087..434076 | - | 990 | WP_001360050.1 | DUF968 domain-containing protein | - |
| CA593_RS02290 () | 434084..434893 | - | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| CA593_RS02295 () | 434913..435301 | - | 389 | Protein_410 | RusA family crossover junction endodeoxyribonuclease | - |
| CA593_RS02300 () | 435298..435624 | - | 327 | WP_021518589.1 | LexA repressor | - |
| CA593_RS02305 () | 435624..436118 | - | 495 | WP_001373594.1 | PerC family transcriptional regulator | - |
| CA593_RS02310 () | 436115..437056 | - | 942 | WP_000104977.1 | helix-turn-helix domain-containing protein | - |
| CA593_RS02315 () | 437046..437225 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| CA593_RS02320 () | 437401..437952 | - | 552 | WP_001434539.1 | hypothetical protein | - |
| CA593_RS02325 () | 437990..438190 | - | 201 | WP_000205494.1 | cell division protein | - |
| CA593_RS02330 () | 438288..438914 | + | 627 | WP_000450735.1 | LexA family transcriptional regulator | - |
| CA593_RS02335 () | 439142..439657 | - | 516 | WP_000559916.1 | hypothetical protein | - |
| CA593_RS27595 () | 439802..440113 | + | 312 | Protein_419 | hypothetical protein | - |
| CA593_RS02340 () | 440128..440490 | + | 363 | WP_000135682.1 | hypothetical protein | - |
| CA593_RS02345 () | 440556..441380 | + | 825 | WP_057077927.1 | DUF2303 family protein | - |
| CA593_RS02350 () | 441508..442044 | + | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| CA593_RS02355 () | 442035..442397 | + | 363 | WP_001242749.1 | phage protein | - |
| CA593_RS02360 () | 442397..442702 | + | 306 | WP_000206734.1 | hypothetical protein | - |
| CA593_RS02370 () | 442929..444092 | + | 1164 | WP_057077906.1 | hypothetical protein ; Integrase | Integrase |
| CA593_RS02380 () | 444297..445550 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| CA593_RS02385 () | 445562..446665 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| CA593_RS02390 () | 446953..448008 | + | 1056 | WP_000749867.1 | phosphoporin PhoE | - |
| CA593_RS02395 () | 448047..448448 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| CA593_RS02400 () | 448506..449750 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 449166..449246 | - | 81 | NuclAT_12 | - | - |
| - () | 449166..449246 | - | 81 | NuclAT_12 | - | - |
| - () | 449166..449246 | - | 81 | NuclAT_12 | - | - |
| - () | 449166..449246 | - | 81 | NuclAT_12 | - | - |
| CA593_RS02405 () | 449842..450300 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| CA593_RS02410 () | 450561..452018 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| CA593_RS02415 () | 452075..452596 | - | 522 | Protein_433 | peptide chain release factor H | - |
| CA593_RS02420 () | 452592..452798 | - | 207 | Protein_434 | RtcB family protein | - |
| CA593_RS02430 () | 453116..453568 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| CA593_RS02435 () | 453578..453976 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| CA593_RS02440 () | 453979..454272 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| CA593_RS02445 () | 454324..455379 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| CA593_RS02450 () | 455450..456235 | - | 786 | WP_000207552.1 | Threonylcarbamoyl-AMP synthase | VF |
| CA593_RS02455 () | 456207..457919 | + | 1713 | Protein_440 | hypothetical protein | VF |
| CA593_RS02460 () | 458143..458640 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| CA593_RS02465 () | 458816..459565 | - | 750 | WP_000056849.1 | Chaperone protein DnaJ | VF |
| CA593_RS02470 () | 459775..460035 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| CA593_RS02475 () | 460038..460316 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| CA593_RS02480 () | 460472..461212 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| CA593_RS02485 () | 461183..461950 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| CA593_RS02490 () | 462156..462734 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|