MGE detailed information
MGE type: Genomic_island MGE length: 31465 bp
Accession: NZ_CP020889 Location: 4016493..4047957 Organism: Xanthomonas citri pv. citri strain TX160197 Replicon: chromosome
Accession: NZ_CP020889 Location: 4016493..4047957 Organism: Xanthomonas citri pv. citri strain TX160197 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7L67_RS18290 () | 4012286..4013944 | + | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| B7L67_RS18295 () | 4013956..4014465 | + | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| B7L67_RS18300 () | 4014508..4015614 | - | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| B7L67_RS26220 () | 4015897..4016073 | - | 177 | WP_199924232.1 | hypothetical protein | - |
| B7L67_RS18305 () | 4016493..4018610 | - | 2118 | WP_015463321.1 | ATP-binding protein | - |
| B7L67_RS18310 () | 4018607..4020001 | - | 1395 | WP_011051590.1 | SIR2 family protein | - |
| B7L67_RS18315 () | 4020383..4021165 | - | 783 | WP_015471496.1 | IS21 family transposase ISXci1 | Transposase |
| B7L67_RS18320 () | 4021165..4022175 | - | 1011 | WP_015471495.1 | IS21 family transposase ISXci1 | Transposase |
| B7L67_RS18325 () | 4022607..4022840 | - | 234 | WP_040107635.1 | hypothetical protein | - |
| B7L67_RS18330 () | 4023073..4024074 | + | 1002 | WP_011051588.1 | replication protein | - |
| B7L67_RS18335 () | 4024473..4024733 | - | 261 | WP_015463320.1 | hypothetical protein | - |
| B7L67_RS18340 () | 4025294..4025494 | + | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| B7L67_RS26225 () | 4025687..4025863 | + | 177 | WP_015463318.1 | hypothetical protein | - |
| B7L67_RS18350 () | 4025886..4026296 | - | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| B7L67_RS18355 () | 4026400..4026729 | - | 330 | WP_015463316.1 | hypothetical protein | - |
| B7L67_RS18360 () | 4026738..4027655 | - | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| B7L67_RS18365 () | 4027652..4029238 | - | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| B7L67_RS18370 () | 4029235..4029423 | - | 189 | WP_011051582.1 | hypothetical protein | - |
| B7L67_RS18375 () | 4029474..4031582 | - | 2109 | WP_015472116.1 | AAA family ATPase | - |
| B7L67_RS18380 () | 4031772..4032728 | - | 957 | WP_015472114.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| B7L67_RS18385 () | 4033347..4034572 | - | 1226 | Protein_3410 | IS3 family transposase ISJsp1 | Transposase |
| B7L67_RS18390 () | 4034621..4035403 | + | 783 | Protein_3411 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| B7L67_RS18395 () | 4035519..4036895 | + | 1377 | WP_011347842.1 | IS5 family transposase ISXca5 | Transposase |
| B7L67_RS18400 () | 4036918..4037409 | + | 492 | Protein_3413 | Tn3 family transposase ISPsy42 | Transposase |
| B7L67_RS18405 () | 4037579..4037857 | + | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| B7L67_RS18410 () | 4037845..4038135 | + | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B7L67_RS18415 () | 4038138..4038452 | + | 315 | WP_015463310.1 | hypothetical protein | - |
| B7L67_RS18420 () | 4038723..4038902 | + | 180 | WP_015463309.1 | hypothetical protein | - |
| B7L67_RS18425 () | 4039115..4040202 | + | 1088 | Protein_3418 | IS3 family transposase ISXcd1 | Transposase |
| B7L67_RS18430 () | 4040242..4041375 | + | 1134 | Protein_3419 | IS5 family transposase ISXo4 | Transposase |
| B7L67_RS26230 () | 4041442..4042398 | + | 957 | WP_011051571.1 | hypothetical protein | - |
| B7L67_RS18445 () | 4043263..4043784 | - | 522 | WP_011051570.1 | hypothetical protein | - |
| B7L67_RS18450 () | 4043794..4045965 | - | 2172 | WP_015472108.1 | DotA/TraY family protein | - |
| B7L67_RS18460 () | 4046866..4047957 | - | 1092 | WP_015463304.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| B7L67_RS18470 () | 4048246..4048647 | - | 402 | WP_003485983.1 | H-NS histone family protein | - |
| B7L67_RS18475 () | 4048867..4049043 | + | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| B7L67_RS18480 () | 4049059..4051677 | + | 2619 | WP_015472106.1 | DNA ligase D | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0.006 |