MGE detailed information
MGE type: Genomic_island MGE length: 31465 bp
Accession: NZ_CP020882 Location: 2403293..2434757 Organism: Xanthomonas citri pv. citri strain TX160042 Replicon: chromosome
Accession: NZ_CP020882 Location: 2403293..2434757 Organism: Xanthomonas citri pv. citri strain TX160042 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7L65_RS10810 () | 2399086..2400744 | + | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| B7L65_RS10815 () | 2400756..2401265 | + | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| B7L65_RS10820 () | 2401308..2402414 | - | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| B7L65_RS26055 () | 2402697..2402873 | - | 177 | WP_003485979.1 | hypothetical protein | - |
| B7L65_RS10825 () | 2403293..2405410 | - | 2118 | WP_015463321.1 | ATP-binding protein | - |
| B7L65_RS10830 () | 2405407..2406801 | - | 1395 | WP_011051590.1 | SIR2 family protein | - |
| B7L65_RS10835 () | 2407183..2407965 | - | 783 | WP_015471496.1 | IS21 family transposase ISXci1 | Transposase |
| B7L65_RS10840 () | 2407965..2408975 | - | 1011 | WP_015471495.1 | IS21 family transposase ISXci1 | Transposase |
| B7L65_RS10845 () | 2409407..2409640 | - | 234 | WP_040107635.1 | hypothetical protein | - |
| B7L65_RS10850 () | 2409873..2410874 | + | 1002 | WP_011051588.1 | replication protein | - |
| B7L65_RS10855 () | 2411273..2411533 | - | 261 | WP_015463320.1 | hypothetical protein | - |
| B7L65_RS10860 () | 2412094..2412294 | + | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| B7L65_RS10865 () | 2412269..2412663 | + | 395 | Protein_2022 | relaxase | - |
| B7L65_RS10870 () | 2412686..2413096 | - | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| B7L65_RS10875 () | 2413200..2413529 | - | 330 | WP_015463316.1 | hypothetical protein | - |
| B7L65_RS10880 () | 2413538..2414455 | - | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| B7L65_RS10885 () | 2414452..2416038 | - | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| B7L65_RS10890 () | 2416035..2416223 | - | 189 | WP_011051582.1 | hypothetical protein | - |
| B7L65_RS10895 () | 2416274..2418382 | - | 2109 | WP_015472116.1 | AAA family ATPase | - |
| B7L65_RS10900 () | 2418572..2419510 | - | 939 | WP_043930788.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| B7L65_RS10905 () | 2420147..2421372 | - | 1226 | Protein_2030 | IS3 family transposase ISJsp1 | Transposase |
| B7L65_RS10910 () | 2421421..2422203 | + | 783 | Protein_2031 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| B7L65_RS10915 () | 2422319..2423695 | + | 1377 | WP_011347842.1 | IS5 family transposase ISXca5 | Transposase |
| B7L65_RS10920 () | 2423718..2424209 | + | 492 | Protein_2033 | Tn3 family transposase ISPsy42 | Transposase |
| B7L65_RS10925 () | 2424379..2424657 | + | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| B7L65_RS10930 () | 2424645..2424935 | + | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B7L65_RS10935 () | 2424932..2425252 | + | 321 | WP_099522003.1 | hypothetical protein | - |
| B7L65_RS10940 () | 2425523..2425702 | + | 180 | WP_015463309.1 | hypothetical protein | - |
| B7L65_RS10945 () | 2425915..2427002 | + | 1088 | Protein_2038 | IS3 family transposase ISXcd1 | Transposase |
| B7L65_RS10950 () | 2427042..2428175 | + | 1134 | Protein_2039 | IS5 family transposase ISXo4 | Transposase |
| B7L65_RS10955 () | 2428467..2428660 | + | 194 | Protein_2040 | hypothetical protein | - |
| B7L65_RS10960 () | 2428767..2429135 | - | 369 | WP_015472110.1 | hypothetical protein | - |
| B7L65_RS10965 () | 2430063..2430584 | - | 522 | WP_011051570.1 | hypothetical protein | - |
| B7L65_RS10970 () | 2430594..2432765 | - | 2172 | WP_015472108.1 | DotA/TraY family protein | - |
| B7L65_RS10980 () | 2433666..2434757 | - | 1092 | WP_015463304.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| B7L65_RS10990 () | 2435046..2435447 | - | 402 | WP_003485983.1 | H-NS histone family protein | - |
| B7L65_RS10995 () | 2435667..2435843 | + | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| B7L65_RS11000 () | 2435859..2438477 | + | 2619 | WP_015472106.1 | DNA ligase D | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0.006 |