MGE detailed information
MGE type: Genomic_island MGE length: 31299 bp
Accession: NZ_CP020835 Location: 3827200..3858498 Organism: Escherichia coli strain CFSAN051542 Replicon: chromosome
Accession: NZ_CP020835 Location: 3827200..3858498 Organism: Escherichia coli strain CFSAN051542 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCD20_RS20065 () | 3822703..3823104 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| BCD20_RS20070 () | 3823162..3824406 | - | 1245 | WP_044864403.1 | esterase FrsA | - |
| - () | 3823822..3823902 | - | 81 | NuclAT_11 | - | - |
| - () | 3823822..3823902 | - | 81 | NuclAT_11 | - | - |
| - () | 3823822..3823902 | - | 81 | NuclAT_11 | - | - |
| - () | 3823822..3823902 | - | 81 | NuclAT_11 | - | - |
| BCD20_RS20075 () | 3824498..3824956 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| BCD20_RS20080 () | 3825217..3826674 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| BCD20_RS20085 () | 3826731..3827252 | - | 522 | Protein_3683 | peptide chain release factor H | - |
| BCD20_RS20090 () | 3827251..3827454 | - | 204 | Protein_3684 | RNA ligase RtcB family protein | - |
| BCD20_RS20095 () | 3827700..3828152 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| BCD20_RS20100 () | 3828162..3828560 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| BCD20_RS20105 () | 3828563..3828856 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| BCD20_RS20110 () | 3828908..3829963 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| BCD20_RS20115 () | 3830034..3830819 | - | 786 | WP_000207587.1 | Chemotaxis protein LafU | VF |
| BCD20_RS20120 () | 3830791..3832503 | + | 1713 | Protein_3690 | Flagellar biosynthesis protein FlhA | VF |
| BCD20_RS20125 () | 3832727..3833224 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| BCD20_RS20130 () | 3833400..3834149 | - | 750 | WP_024192679.1 | Murein DD-endopeptidase MepH | VF |
| BCD20_RS20135 () | 3834359..3834619 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| BCD20_RS20140 () | 3834622..3834900 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| BCD20_RS20145 () | 3835056..3835796 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| BCD20_RS20150 () | 3835767..3836534 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| BCD20_RS20155 () | 3836740..3837318 | - | 579 | WP_085381474.1 | Phosphoheptose isomerase | VF |
| BCD20_RS20160 () | 3837558..3840002 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| BCD20_RS20165 () | 3840045..3840491 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| BCD20_RS20170 () | 3840672..3841442 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| BCD20_RS20175 () | 3841483..3842619 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| BCD20_RS20180 () | 3843050..3843442 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| BCD20_RS20185 () | 3843420..3844829 | - | 1410 | Protein_3703 | Protein RhsD | VF |
| BCD20_RS20190 () | 3844828..3845520 | + | 693 | Protein_3704 | hypothetical protein | VF |
| BCD20_RS20195 () | 3845545..3846825 | + | 1281 | WP_001113713.1 | hypothetical protein | VF |
| BCD20_RS20200 () | 3846822..3847346 | + | 525 | WP_001080149.1 | hypothetical protein | VF |
| BCD20_RS20205 () | 3847349..3848680 | + | 1332 | WP_000246443.1 | hypothetical protein | VF |
| BCD20_RS20210 () | 3848685..3849446 | + | 762 | WP_000343289.1 | hypothetical protein | VF |
| BCD20_RS20215 () | 3849455..3849874 | + | 420 | Protein_3709 | Protein ClpV1 | VF |
| BCD20_RS26070 () | 3849875..3850066 | + | 192 | Protein_3710 | Protein ClpV1 | VF |
| BCD20_RS20220 () | 3850065..3850952 | + | 888 | Protein_3711 | hypothetical protein | VF |
| BCD20_RS20225 () | 3850963..3852315 | + | 1353 | WP_001087741.1 | hypothetical protein | VF |
| BCD20_RS20230 () | 3852339..3852821 | + | 483 | WP_001284199.1 | Major exported protein | VF |
| BCD20_RS20235 () | 3852865..3853779 | + | 915 | WP_000908066.1 | hypothetical protein | - |
| BCD20_RS20240 () | 3853789..3854268 | + | 480 | WP_001236645.1 | hypothetical protein | - |
| BCD20_RS20245 () | 3854405..3855190 | - | 786 | WP_001086141.1 | lipoprotein | - |
| BCD20_RS20255 () | 3855727..3856458 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| BCD20_RS20260 () | 3856523..3856990 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| BCD20_RS20265 () | 3856987..3857709 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| BCD20_RS20270 () | 3857743..3858498 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| BCD20_RS20275 () | 3858570..3859928 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| BCD20_RS20280 () | 3859976..3860572 | - | 597 | Protein_3722 | methyltransferase domain-containing protein | - |
| BCD20_RS20285 () | 3860603..3861403 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| BCD20_RS20290 () | 3861644..3862558 | + | 915 | WP_000648572.1 | LysR family transcriptional regulator | - |
| BCD20_RS20295 () | 3862555..3863358 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|