MGE detailed information
MGE type: Prophage MGE length: 26616 bp
Accession: NZ_CP020543 Location: 3579364..3605979 Organism: Escherichia coli C Replicon: chromosome
Accession: NZ_CP020543 Location: 3579364..3605979 Organism: Escherichia coli C Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B6N50_RS18260 (B6N50_18265) | 3575636..3576592 | + | 957 | WP_000121328.1 | molybdenum cofactor insertion chaperone PaoD | - |
| B6N50_RS18265 (B6N50_18270) | 3576772..3577899 | - | 1128 | WP_047403032.1 | MFS transporter | - |
| B6N50_RS18270 (B6N50_18275) | 3578041..3579099 | - | 1059 | WP_122990176.1 | alpha/beta hydrolase | - |
| B6N50_RS18275 (B6N50_18280) | 3579364..3580248 | + | 885 | WP_001119037.1 | HTH-type transcriptional regulator PgrR | VF |
| B6N50_RS23780 | 3580454..3580546 | + | 93 | Protein_3334 | hypothetical protein | - |
| B6N50_RS23785 (B6N50_18290) | 3581110..3581849 | + | 740 | Protein_3335 | IS3 family transposase IS629 | Transposase |
| B6N50_RS18305 (B6N50_18305) | 3582522..3584030 | + | 1509 | WP_032206693.1 | group II intron reverse transcriptase/maturase | - |
| B6N50_RS18310 (B6N50_18310) | 3584120..3584593 | + | 474 | Protein_3337 | IS3 family transposase IS629 | Transposase |
| B6N50_RS18315 (B6N50_18315) | 3584632..3584811 | - | 180 | Protein_3338 | hypothetical protein | - |
| B6N50_RS18320 (B6N50_18320) | 3584977..3585699 | - | 723 | WP_081508859.1 | putative oxidoreductase | VF |
| B6N50_RS18325 (B6N50_18325) | 3585798..3586697 | + | 900 | WP_000687182.1 | HTH-type transcriptional regulator PgrR | VF |
| B6N50_RS18335 (B6N50_18335) | 3587094..3588023 | - | 930 | WP_047085429.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| B6N50_RS18340 (B6N50_18340) | 3588010..3588792 | - | 783 | WP_172808160.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| B6N50_RS18345 (B6N50_18345) | 3589076..3590740 | + | 1665 | Protein_3343 | type I restriction endonuclease subunit R | - |
| B6N50_RS18350 (B6N50_18350) | 3590806..3591968 | + | 1163 | WP_085947598.1 | IS3 family transposase ISEc17 | Transposase |
| B6N50_RS18355 (B6N50_18355) | 3591998..3592333 | - | 336 | Protein_3345 | type III restriction endonuclease subunit R | - |
| B6N50_RS18360 (B6N50_18360) | 3592389..3593086 | + | 698 | Protein_3346 | IS1 family transposase IS1R | Transposase |
| B6N50_RS18365 (B6N50_18365) | 3593103..3593306 | - | 204 | Protein_3347 | DUF3987 domain-containing protein | - |
| B6N50_RS24065 | 3593365..3593460 | + | 96 | WP_211180486.1 | putative translational regulatory protein ArgL | - |
| B6N50_RS18370 (B6N50_18370) | 3593430..3594434 | + | 1005 | WP_001281825.1 | Ornithine carbamoyltransferase subunit F | VF |
| B6N50_RS18375 (B6N50_18375) | 3594573..3595331 | + | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
| B6N50_RS18380 (B6N50_18380) | 3595336..3596946 | - | 1611 | WP_000406872.1 | glycoside hydrolase family 43 protein | - |
| B6N50_RS18385 (B6N50_18385) | 3596958..3598340 | - | 1383 | WP_000192863.1 | MFS transporter | - |
| B6N50_RS18390 (B6N50_18390) | 3598567..3600534 | - | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| B6N50_RS18395 (B6N50_18395) | 3600549..3601457 | - | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| B6N50_RS18400 (B6N50_18400) | 3601752..3602906 | + | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| B6N50_RS18405 (B6N50_18405) | 3603000..3603350 | + | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| B6N50_RS18410 (B6N50_18410) | 3603373..3603621 | + | 249 | Protein_3357 | IS3 family transposase ISEhe3 | Transposase |
| B6N50_RS18415 (B6N50_18415) | 3603631..3603804 | - | 174 | Protein_3358 | IS30 family transposase | - |
| B6N50_RS18425 (B6N50_18425) | 3603860..3604557 | + | 698 | Protein_3359 | IS1 family transposase IS1R | Transposase |
| B6N50_RS18430 (B6N50_18430) | 3604574..3604921 | + | 348 | Protein_3360 | ABC transporter permease subunit | - |
| B6N50_RS18435 (B6N50_18435) | 3604933..3605979 | + | 1047 | WP_000192349.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| B6N50_RS18440 (B6N50_18440) | 3606088..3607020 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| B6N50_RS18445 (B6N50_18445) | 3607007..3608410 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| B6N50_RS18450 (B6N50_18450) | 3608685..3609896 | - | 1212 | WP_000213416.1 | 3-(3-hydroxy-phenyl)propionate transporter MhpT | - |
| B6N50_RS18455 (B6N50_18455) | 3609966..3610979 | - | 1014 | WP_081508861.1 | 4-hydroxy-2-oxovalerate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli strain WG5 | Prophage | TA86707 | NZ_CP024090 | 3559029..3585644 | 0 | |
| Escherichia coli strain NCTC122 | Prophage | TA293757 | NZ_LT906474 | 3578439..3605054 | 0 |