MGE detailed information
MGE type: Prophage MGE length: 16658 bp
Accession: NZ_CP020424 Location: 3774825..3791482 Organism: Clostridioides difficile strain FDAARGOS_267 Replicon: chromosome
Accession: NZ_CP020424 Location: 3774825..3791482 Organism: Clostridioides difficile strain FDAARGOS_267 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J95_RS17575 () | 3770180..3771769 | - | 1590 | WP_009903140.1 | sensor histidine kinase | - |
| A6J95_RS17580 () | 3771738..3772454 | - | 717 | WP_004454617.1 | response regulator transcription factor | - |
| A6J95_RS17585 () | 3772993..3773793 | - | 801 | WP_004454616.1 | PIG-L family deacetylase | - |
| A6J95_RS17590 () | 3774107..3774838 | - | 732 | WP_009897498.1 | membrane protein | - |
| A6J95_RS17595 () | 3774825..3775520 | - | 696 | WP_009893573.1 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
| A6J95_RS17600 () | 3775522..3776313 | - | 792 | WP_009897495.1 | ABC transporter permease | - |
| A6J95_RS17605 () | 3776323..3777135 | - | 813 | WP_004454609.1 | molybdate ABC transporter substrate-binding protein | - |
| A6J95_RS17610 () | 3777770..3777970 | - | 201 | WP_003423148.1 | cold-shock protein | - |
| A6J95_RS17615 () | 3778195..3778371 | - | 177 | WP_009890506.1 | hypothetical protein | - |
| A6J95_RS17620 () | 3778694..3778894 | - | 201 | WP_004454608.1 | hypothetical protein | VF |
| A6J95_RS17625 () | 3778896..3779246 | - | 351 | WP_004454606.1 | DUF3796 domain-containing protein | - |
| A6J95_RS17630 () | 3779408..3779597 | + | 190 | Protein_3326 | IS3 family transposase ISEfa10 | Transposase |
| A6J95_RS20275 () | 3780074..3780244 | - | 171 | WP_021394397.1 | hypothetical protein | - |
| A6J95_RS17640 () | 3780633..3781121 | - | 489 | WP_009897487.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| A6J95_RS17645 () | 3781925..3782299 | + | 375 | WP_004454597.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| A6J95_RS17650 () | 3782404..3782777 | + | 374 | Protein_3330 | BlaI/MecI/CopY family transcriptional regulator | - |
| A6J95_RS17655 () | 3783067..3783585 | + | 519 | Protein_3331 | IS200-IS605 family transposase ISEfa4 | Transposase |
| A6J95_RS17665 () | 3784017..3784271 | + | 255 | WP_004454592.1 | hypothetical protein | - |
| A6J95_RS17670 () | 3784307..3784630 | + | 324 | WP_009897482.1 | hypothetical protein | - |
| A6J95_RS17675 () | 3784904..3785056 | + | 153 | WP_004454589.1 | hypothetical protein | Toxin Detail |
| - () | 3784977..3785106 | - | 130 | NuclAT_3 | - | Antitoxin Detail |
| A6J95_RS17680 () | 3785250..3786134 | + | 885 | WP_009897481.1 | hypothetical protein | - |
| A6J95_RS20415 () | 3787117..3787269 | + | 153 | WP_009897477.1 | hypothetical protein | - |
| A6J95_RS20420 () | 3787389..3788203 | + | 815 | Protein_3337 | toxin Bro | - |
| A6J95_RS17695 () | 3788255..3788416 | + | 162 | WP_004454578.1 | hypothetical protein | - |
| A6J95_RS17705 () | 3788744..3789208 | - | 465 | WP_009897467.1 | hypothetical protein | - |
| A6J95_RS17710 () | 3789344..3789661 | - | 318 | WP_009897465.1 | hypothetical protein | - |
| A6J95_RS17715 () | 3789944..3790240 | - | 297 | WP_009897463.1 | hypothetical protein | - |
| A6J95_RS17720 () | 3790259..3790672 | - | 414 | WP_009897459.1 | hypothetical protein | - |
| A6J95_RS17725 () | 3790656..3790889 | - | 234 | WP_003423177.1 | hypothetical protein | VF |
| A6J95_RS17730 () | 3791108..3791482 | + | 375 | WP_009897458.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| A6J95_RS17735 () | 3792094..3792786 | + | 693 | WP_004454566.1 | response regulator transcription factor | - |
| A6J95_RS17745 () | 3792982..3795042 | + | 2061 | WP_009897457.1 | sensor histidine kinase | - |
| A6J95_RS17750 () | 3795248..3795571 | - | 324 | WP_004454564.1 | AzlD domain-containing protein | - |
| A6J95_RS17755 () | 3795564..3796265 | - | 702 | WP_004454563.1 | AzlC family ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Clostridium difficile 630 | Prophage | TA10176 | NC_009089 | 2658361..2675497 | 0.01 |