MGE detailed information
MGE type: Prophage MGE length: 10667 bp
Accession: NZ_CP020368 Location: 1379351..1390017 Organism: Escherichia coli strain BLR(DE3) Replicon: chromosome
Accession: NZ_CP020368 Location: 1379351..1390017 Organism: Escherichia coli strain BLR(DE3) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B5762_RS23930 () | 1375340..1375387 | + | 48 | WP_211180494.1 | protein YnaN | - |
| B5762_RS07235 () | 1375401..1376384 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| B5762_RS07245 () | 1376862..1378235 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| B5762_RS07250 () | 1378364..1379299 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| B5762_RS07255 () | 1379351..1380586 | - | 1236 | WP_000040858.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| B5762_RS07260 () | 1380588..1380803 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| B5762_RS07265 () | 1380882..1381091 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 1380907..1381085 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1380907..1381085 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1380907..1381085 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1380907..1381085 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| B5762_RS07270 () | 1381084..1381278 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| B5762_RS07275 () | 1381335..1382144 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| B5762_RS07280 () | 1382137..1383236 | - | 1100 | Protein_1337 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| B5762_RS07285 () | 1383338..1383613 | - | 276 | WP_000632297.1 | protein RacC | - |
| B5762_RS07290 () | 1383688..1383858 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| B5762_RS07295 () | 1383858..1384079 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| B5762_RS07305 () | 1384521..1385009 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| B5762_RS07310 () | 1385006..1385161 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| B5762_RS07320 () | 1385305..1385517 | + | 213 | WP_012775985.1 | phage lysis protein EssD | - |
| B5762_RS07325 () | 1385522..1385866 | + | 345 | WP_000193293.1 | YdfR family protein | - |
| B5762_RS07330 () | 1385832..1386104 | - | 273 | WP_000370546.1 | hypothetical protein | - |
| B5762_RS07335 () | 1386210..1386743 | + | 534 | WP_000992105.1 | lysozyme | - |
| B5762_RS07345 () | 1386960..1387145 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| B5762_RS07350 () | 1387342..1388799 | + | 1458 | WP_001097897.1 | Trk system potassium transporter TrkG | - |
| B5762_RS07360 () | 1388937..1389332 | + | 396 | WP_012775984.1 | ParB/Srx family N-terminal domain-containing protein | - |
| B5762_RS07365 () | 1389304..1390017 | + | 714 | Protein_1350 | hypothetical protein | - |
| B5762_RS07370 () | 1390014..1390292 | + | 279 | WP_000654171.1 | hypothetical protein | - |
| B5762_RS07375 () | 1390305..1390598 | + | 294 | WP_000355360.1 | hypothetical protein | - |
| B5762_RS07380 () | 1390618..1390728 | + | 111 | Protein_1353 | tail fiber assembly protein | - |
| B5762_RS07385 () | 1390826..1391416 | - | 591 | WP_000078178.1 | recombinase family protein | - |
| B5762_RS07390 () | 1391733..1391966 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| B5762_RS23570 () | 1392035..1392148 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| B5762_RS23575 () | 1392488..1392661 | + | 174 | WP_001157925.1 | hypothetical protein | - |
| B5762_RS07395 () | 1392927..1393361 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| B5762_RS07400 () | 1393502..1394635 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli strain BL21 (TaKaRa) | Prophage | TA52902 | NZ_CP010816 | 1366333..1378398 | 0.003 |