MGE detailed information
MGE type: IScluster/Tn MGE length: 22125 bp
Accession: NZ_CP020343 Location: 86499..108623 Organism: Shigella flexneri 1a strain 0439 Replicon: plasmid unnamed1
Accession: NZ_CP020343 Location: 86499..108623 Organism: Shigella flexneri 1a strain 0439 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS647_RS25975 (BS647_26090) | 82720..83622 | + | 903 | WP_015683198.1 | DUF1281 domain-containing protein | - |
| BS647_RS25980 (BS647_26095) | 83619..83930 | + | 312 | WP_011114770.1 | hypothetical protein | - |
| BS647_RS25985 (BS647_26100) | 83994..84677 | + | 684 | WP_000086135.1 | DNA methylase | - |
| BS647_RS25990 (BS647_26105) | 84678..84899 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| BS647_RS27640 | 84859..85345 | + | 487 | Protein_105 | DUF1380 domain-containing protein | - |
| BS647_RS26005 (BS647_26120) | 85390..86160 | + | 771 | WP_001006196.1 | hypothetical protein | - |
| BS647_RS26015 (BS647_26130) | 86499..87218 | - | 720 | Protein_107 | IS110 family transposase ISSfl8 | Transposase |
| BS647_RS26020 (BS647_26135) | 87227..88288 | - | 1062 | Protein_108 | IS66 family transposase ISSfl3 | Transposase |
| BS647_RS26030 (BS647_26145) | 89544..90095 | - | 552 | Protein_110 | IS66 family transposase ISSfl3 | Transposase |
| BS647_RS26035 (BS647_26150) | 90092..90442 | - | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| BS647_RS26040 (BS647_26155) | 90439..91113 | - | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| BS647_RS26045 (BS647_26160) | 91312..91782 | + | 471 | Protein_113 | IS1 family transposase IS1N | Transposase |
| BS647_RS28035 (BS647_26165) | 91941..92579 | + | 639 | WP_000607008.1 | hypothetical protein | VF |
| BS647_RS26055 | 92694..92963 | + | 270 | Protein_115 | IS3 family transposase ISEc48 | Transposase |
| BS647_RS26060 (BS647_26175) | 93006..94093 | + | 1088 | Protein_116 | IS3 family transposase IS2 | Transposase |
| BS647_RS26065 (BS647_26180) | 94173..94847 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| BS647_RS26070 (BS647_26185) | 94844..95191 | + | 348 | WP_000631708.1 | IS66 family transposase ISSfl3 | Transposase |
| BS647_RS26075 (BS647_26190) | 95211..96812 | + | 1602 | WP_011110603.1 | IS66 family transposase ISSfl3 | Transposase |
| BS647_RS26080 (BS647_26195) | 97001..97186 | + | 186 | Protein_120 | IS21 family transposase IS100 | Transposase |
| BS647_RS28040 (BS647_26200) | 97286..97495 | - | 210 | Protein_121 | peptidoglycan-binding protein | - |
| BS647_RS26090 (BS647_26205) | 97545..97796 | - | 252 | WP_015683204.1 | transporter | - |
| BS647_RS26100 (BS647_26215) | 98248..98532 | + | 285 | WP_011114774.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| BS647_RS26105 (BS647_26220) | 98532..98807 | + | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BS647_RS26120 (BS647_26235) | 99786..100739 | + | 954 | Protein_126 | IS66 family transposase ISEc49 | Transposase |
| BS647_RS26125 (BS647_26240) | 101275..101493 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| BS647_RS26130 (BS647_26245) | 101495..101800 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| BS647_RS26140 (BS647_26250) | 102193..103830 | + | 1638 | WP_000936806.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| BS647_RS26145 (BS647_26255) | 104038..104307 | + | 270 | Protein_130 | type II toxin-antitoxin system antitoxin YacA | - |
| BS647_RS28675 | 104307..104476 | + | 170 | Protein_131 | type II toxin-antitoxin system toxin YacB | - |
| BS647_RS26150 (BS647_26260) | 104559..105149 | + | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| BS647_RS26160 (BS647_26270) | 105506..105772 | + | 267 | Protein_133 | IS66 family transposase ISCro1 | Transposase |
| BS647_RS26165 (BS647_26275) | 105835..107103 | + | 1269 | Protein_134 | IS4 family transposase IS4 | Transposase |
| BS647_RS26170 (BS647_26280) | 107160..108369 | + | 1210 | Protein_135 | IS3 family transposase | - |
| BS647_RS28680 | 108410..108490 | + | 81 | Protein_136 | hypothetical protein | - |
| BS647_RS28125 (BS647_26285) | 108504..108695 | - | 192 | Protein_137 | IS66 family transposase ISCro1 | Transposase |
| BS647_RS26180 (BS647_26290) | 108693..109017 | + | 325 | Protein_138 | IS3 family transposase | - |
| BS647_RS26185 (BS647_26295) | 109047..111959 | - | 2913 | WP_011114777.1 | ankyrin repeat domain-containing protein | - |
| BS647_RS26200 (BS647_26305) | 112442..113284 | + | 843 | WP_000931197.1 | polysaccharide deacetylase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|