MGE detailed information
MGE type: Conjugative plasmid MGE length: 142304 bp
Accession: NZ_CP019905 Location: 1..142304 Organism: Escherichia coli strain MDR_56 Replicon: plasmid unnamed6
Accession: NZ_CP019905 Location: 1..142304 Organism: Escherichia coli strain MDR_56 Replicon: plasmid unnamed6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B1200_RS26720 () | 533..799 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| B1200_RS26725 () | 893..1327 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| B1200_RS26735 () | 2056..2556 | - | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| B1200_RS26745 () | 3004..4179 | - | 1176 | WP_000942657.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| B1200_RS26750 () | 4309..5028 | - | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| B1200_RS26755 () | 5025..5459 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| B1200_RS26760 () | 5514..7472 | - | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| B1200_RS26765 () | 7531..7764 | - | 234 | WP_000006012.1 | DUF905 family protein | - |
| B1200_RS26770 () | 7822..8349 | - | 528 | WP_001276127.1 | single-stranded DNA-binding protein | - |
| B1200_RS30340 () | 8718..8786 | + | 69 | Protein_10 | pilus protein | - |
| B1200_RS26785 () | 9119..9310 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| B1200_RS26790 () | 9307..9729 | - | 423 | WP_015058200.1 | DUF1380 family protein | - |
| B1200_RS26795 () | 9776..10078 | - | 303 | WP_014653258.1 | antirestriction protein | - |
| B1200_RS30210 () | 10619..11395 | - | 777 | WP_015058197.1 | hypothetical protein | - |
| B1200_RS26810 () | 11441..11875 | - | 435 | WP_000274500.1 | DUF1380 family protein | - |
| B1200_RS26815 () | 11889..12110 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| B1200_RS26820 () | 12111..12794 | - | 684 | WP_000086149.1 | DNA methylase | - |
| B1200_RS26825 () | 12870..13181 | - | 312 | WP_014640311.1 | hypothetical protein | - |
| B1200_RS26830 () | 13178..14080 | - | 903 | WP_077790361.1 | DUF1281 domain-containing protein | - |
| B1200_RS26840 () | 14498..14746 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| B1200_RS26845 () | 14743..15180 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| B1200_RS26850 () | 15180..16454 | + | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| B1200_RS26855 () | 16456..16872 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| B1200_RS26860 () | 16865..17845 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| B1200_RS26865 () | 18259..18567 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| B1200_RS26870 () | 18654..19298 | - | 645 | WP_001144036.1 | ParA family protein | - |
| B1200_RS26875 () | 19477..20283 | - | 807 | WP_078081109.1 | site-specific integrase | - |
| B1200_RS26880 () | 20284..20589 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| B1200_RS26885 () | 20591..20809 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| B1200_RS26900 () | 21387..22475 | + | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| B1200_RS26905 () | 22477..24702 | + | 2226 | WP_000698737.1 | phage T7 exclusion protein | - |
| B1200_RS26910 () | 24752..25651 | - | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| B1200_RS26915 () | 25641..25931 | - | 291 | WP_000111771.1 | hypothetical protein | - |
| B1200_RS26925 () | 26227..26457 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| B1200_RS26930 () | 26454..26870 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| B1200_RS26935 () | 27032..29170 | - | 2139 | WP_000350638.1 | AAA family ATPase | - |
| B1200_RS26940 () | 29524..29781 | + | 258 | WP_078081110.1 | hypothetical protein | - |
| B1200_RS26945 () | 29781..30371 | + | 591 | WP_000194575.1 | hypothetical protein | - |
| B1200_RS26950 () | 30634..32190 | + | 1557 | WP_000818556.1 | AAA family ATPase | - |
| B1200_RS26955 () | 32381..32998 | + | 618 | WP_000521603.1 | hypothetical protein | - |
| B1200_RS26960 () | 33291..34328 | - | 1038 | WP_044502555.1 | permease | - |
| B1200_RS26965 () | 34433..34756 | + | 324 | WP_001175594.1 | helix-turn-helix domain-containing protein | - |
| B1200_RS30345 () | 34857..35066 | + | 210 | Protein_43 | hypothetical protein | - |
| B1200_RS26975 () | 35116..35820 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| B1200_RS26985 () | 35957..36817 | + | 861 | WP_002904004.1 | Beta-lactamase SHV-2 | ARG |
| B1200_RS26990 () | 36838..37599 | - | 762 | WP_002210513.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| B1200_RS27000 () | 37883..38587 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| B1200_RS27005 () | 38641..39003 | - | 363 | Protein_48 | IS91 family transposase ISAzo26 | Transposase |
| B1200_RS27010 () | 39148..39645 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| B1200_RS29800 () | 39757..40047 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| B1200_RS27015 () | 40053..40844 | + | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| B1200_RS27020 () | 41008..41355 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| B1200_RS27025 () | 41349..42188 | + | 840 | WP_078081112.1 | Dihydropteroate synthase | ARG |
| B1200_RS27035 () | 42316..42519 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| B1200_RS27040 () | 42675..43880 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| B1200_RS27045 () | 43891..44196 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| B1200_RS30215 () | 44240..44305 | + | 66 | Protein_57 | EAL domain-containing protein | - |
| B1200_RS27060 () | 44423..45187 | + | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| B1200_RS27070 () | 45680..46263 | - | 584 | Protein_59 | TetR/AcrR family transcriptional regulator | - |
| B1200_RS27075 () | 46263..47501 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| B1200_RS27080 () | 47498..48403 | - | 906 | WP_040078663.1 | hypothetical protein | ARG |
| B1200_RS27085 () | 48525..49229 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| B1200_RS27090 () | 49365..50180 | - | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| B1200_RS27095 () | 50336..51040 | - | 705 | WP_001067855.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| B1200_RS27100 () | 51104..52177 | + | 1074 | Protein_65 | Methyl-accepting chemotaxis protein McpQ | VF |
| B1200_RS27110 () | 52345..53049 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| B1200_RS27120 () | 53114..54523 | + | 1410 | Protein_67 | Tn3-like element TnAs1 family transposase | - |
| B1200_RS27125 () | 54500..54892 | - | 393 | WP_095516966.1 | H-NS histone family protein | - |
| B1200_RS27135 () | 55015..56183 | + | 1169 | WP_096998908.1 | IS3 family transposase ISLad1 | Transposase |
| B1200_RS27140 () | 56133..56357 | - | 225 | WP_077250371.1 | helix-turn-helix domain-containing protein | - |
| B1200_RS27145 () | 56462..57898 | + | 1437 | WP_065203202.1 | glutathione synthase | - |
| B1200_RS27150 () | 58270..58971 | - | 702 | Protein_72 | DNA topoisomerase III | - |
| B1200_RS27155 () | 58991..59236 | - | 246 | WP_001243650.1 | hypothetical protein | - |
| B1200_RS27160 () | 59651..60121 | - | 471 | WP_000689410.1 | thermonuclease family protein | - |
| B1200_RS27170 () | 60249..61085 | - | 837 | WP_049195390.1 | hypothetical protein | ARG |
| B1200_RS27175 () | 61085..61888 | - | 804 | WP_001082320.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| B1200_RS27185 () | 63189..63803 | - | 615 | WP_000904906.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| B1200_RS27190 () | 63929..64294 | + | 366 | Protein_79 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| B1200_RS27195 () | 64670..65089 | - | 420 | WP_061586529.1 | hypothetical protein | - |
| B1200_RS27200 () | 65252..65524 | - | 273 | WP_061586528.1 | hypothetical protein | - |
| B1200_RS27205 () | 65855..67471 | - | 1617 | WP_157918524.1 | ABC-F type ribosomal protection protein | - |
| B1200_RS27210 () | 67563..68438 | - | 876 | WP_078081115.1 | SDR family oxidoreductase | - |
| B1200_RS27215 () | 68753..69343 | - | 591 | Protein_84 | APH(6) family putative aminoglycoside O-phosphotransferase | - |
| B1200_RS27220 () | 69340..69720 | - | 381 | Protein_85 | BLMT family bleomycin binding protein | - |
| B1200_RS27225 () | 69741..70535 | - | 795 | WP_000572405.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| B1200_RS27230 () | 70564..71994 | - | 1431 | Protein_87 | IS4 family transposase IS50R | Transposase |
| B1200_RS27235 () | 72089..73888 | + | 1800 | Protein_88 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| B1200_RS27240 () | 73968..74321 | - | 354 | WP_011117595.1 | transcriptional regulator | - |
| B1200_RS30350 () | 74503..74690 | - | 188 | Protein_90 | hypothetical protein | - |
| B1200_RS27255 () | 75597..76628 | - | 1032 | WP_000907863.1 | replication initiation protein | - |
| B1200_RS27270 () | 77601..77864 | + | 264 | WP_001324596.1 | ash family protein | - |
| B1200_RS27275 () | 77782..78069 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| B1200_RS27285 () | 78511..79044 | + | 534 | WP_001306770.1 | transcription termination factor NusG | - |
| B1200_RS27290 () | 79297..79980 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| B1200_RS27300 () | 80153..80704 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| B1200_RS27305 () | 80866..81120 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| B1200_RS27310 () | 81287..81583 | + | 297 | WP_000494780.1 | hypothetical protein | - |
| B1200_RS27325 () | 82502..83569 | + | 1068 | WP_075631433.1 | hypothetical protein | VF |
| B1200_RS27330 () | 83569..84006 | + | 438 | WP_000539806.1 | hypothetical protein | VF |
| B1200_RS27335 () | 84020..85702 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| B1200_RS27340 () | 85860..87073 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| B1200_RS27345 () | 87057..88304 | + | 1248 | WP_078081116.1 | hypothetical protein | VF |
| B1200_RS27350 () | 88291..88743 | + | 453 | WP_001247336.1 | hypothetical protein | VF |
| B1200_RS27355 () | 88754..90307 | + | 1554 | WP_075631434.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| B1200_RS27360 () | 90320..91417 | + | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| B1200_RS27365 () | 91435..92049 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| B1200_RS27370 () | 92059..92619 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| B1200_RS27375 () | 92604..93260 | + | 657 | WP_001193554.1 | hypothetical protein | VF |
| B1200_RS27380 () | 93260..94549 | + | 1290 | Protein_110 | hypothetical protein | VF |
| B1200_RS27405 () | 95700..95855 | - | 156 | WP_001302705.1 | hypothetical protein | - |
| B1200_RS27410 () | 95983..97137 | + | 1155 | WP_001139958.1 | integrase | - |
| B1200_RS27415 () | 97288..98112 | + | 825 | WP_001238927.1 | hypothetical protein | - |
| B1200_RS27420 () | 98198..99400 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| B1200_RS27425 () | 99460..100044 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| B1200_RS27430 () | 100439..100897 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| B1200_RS27435 () | 100894..101712 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| B1200_RS27440 () | 101709..102857 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| B1200_RS27445 () | 102854..103144 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| B1200_RS27450 () | 103159..103710 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| B1200_RS27455 () | 103800..107567 | + | 3768 | WP_032072594.1 | sogL | - |
| B1200_RS27460 () | 107585..107932 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| B1200_RS27465 () | 107929..108621 | + | 693 | WP_032072593.1 | DotI/IcmL family type IV secretion protein | - |
| B1200_RS29835 () | 108632..108931 | + | 300 | Protein_124 | IncI1-type conjugal transfer protein TraN | - |
| B1200_RS27475 () | 110242..110928 | + | 687 | Protein_126 | hypothetical protein | VF |
| B1200_RS27480 () | 110931..112220 | + | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| B1200_RS27485 () | 112220..112924 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| B1200_RS27490 () | 112924..113451 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| B1200_RS27495 () | 113502..113720 | + | 219 | Protein_130 | conjugal transfer protein TraR | - |
| B1200_RS27500 () | 113814..115244 | + | 1431 | WP_000633033.1 | IS4 family transposase IS50R | Transposase |
| B1200_RS27505 () | 115231..115449 | + | 219 | Protein_132 | conjugal transfer protein TraR | - |
| B1200_RS27510 () | 115513..115701 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| B1200_RS27515 () | 115685..116485 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| B1200_RS29840 () | 116575..116994 | + | 420 | Protein_135 | ATP-binding protein | - |
| B1200_RS27525 () | 117050..118263 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| B1200_RS27530 () | 118305..120932 | + | 2628 | Protein_137 | IncI1-type conjugal transfer protein TraU | - |
| B1200_RS27535 () | 120932..121546 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| B1200_RS27540 () | 121513..122715 | + | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| B1200_RS27545 () | 122744..123328 | + | 585 | WP_032072591.1 | IncI1-type conjugal transfer protein TraX | - |
| B1200_RS27550 () | 123425..125593 | + | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| B1200_RS27555 () | 125664..126326 | + | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| B1200_RS27560 () | 126424..126633 | + | 210 | WP_032178830.1 | hemolysin expression modulator Hha | - |
| B1200_RS27565 () | 126965..127369 | - | 405 | WP_001175009.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| B1200_RS27570 () | 127428..128654 | + | 1227 | WP_024186316.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| B1200_RS30355 () | 128699..128836 | + | 138 | WP_047088497.1 | hypothetical protein | - |
| B1200_RS27580 () | 129497..129748 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| B1200_RS27585 () | 129820..129972 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - () | 130022..130084 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 130022..130084 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 130022..130084 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 130022..130084 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| B1200_RS27590 () | 130264..131472 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| B1200_RS29850 () | 131491..131712 | + | 222 | Protein_150 | DsbC family protein | - |
| B1200_RS27605 () | 133129..133872 | + | 744 | WP_080087028.1 | DsbC family protein | - |
| B1200_RS27610 () | 133865..136156 | + | 2292 | WP_001289276.1 | hypothetical protein | - |
| B1200_RS27615 () | 136193..138892 | - | 2700 | WP_001306778.1 | Protein TraI | Relaxase |
| B1200_RS27620 () | 138903..139235 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| B1200_RS27625 () | 139469..139804 | + | 336 | WP_000157098.1 | hypothetical protein | - |
| B1200_RS27630 () | 139889..140737 | - | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| B1200_RS30360 () | 141086..141283 | + | 198 | WP_001412266.1 | hypothetical protein | - |
| B1200_RS27645 () | 141317..141568 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| B1200_RS30365 () | 141599..141769 | - | 171 | WP_000150325.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|