MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 108340 bp
Accession: NZ_CP019904 Location: 1..108340 Organism: Escherichia coli strain MDR_56 Replicon: plasmid unnamed1
Accession: NZ_CP019904 Location: 1..108340 Organism: Escherichia coli strain MDR_56 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B1200_RS26045 () | 406..1032 | + | 627 | WP_001568086.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| B1200_RS26050 () | 1029..2921 | + | 1893 | WP_078081107.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| B1200_RS26055 () | 2934..3194 | + | 261 | WP_001568084.1 | conjugal transfer protein TrbE | - |
| B1200_RS26060 () | 3191..3523 | + | 333 | WP_001568083.1 | hypothetical protein | - |
| B1200_RS26065 () | 3539..4288 | + | 750 | WP_001568082.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| B1200_RS26070 () | 4299..4532 | + | 234 | WP_001568081.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| B1200_RS26075 () | 4552..5088 | + | 537 | WP_032160235.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| B1200_RS26080 () | 5075..6445 | + | 1371 | WP_001568079.1 | conjugal transfer protein TraH | - |
| B1200_RS26085 () | 6445..9294 | + | 2850 | WP_001568078.1 | conjugal transfer mating pair stabilization protein TraG | - |
| B1200_RS26090 () | 9297..9827 | + | 531 | WP_001568077.1 | hypothetical protein | - |
| B1200_RS26095 () | 10005..10736 | + | 732 | WP_045889127.1 | complement resistance protein TraT | - |
| B1200_RS26100 () | 10921..13128 | + | 2208 | WP_001568075.1 | type IV conjugative transfer system coupling protein TraD | - |
| B1200_RS26105 () | 13128..18383 | + | 5256 | WP_001568074.1 | Multifunctional conjugation protein TraI | Relaxase |
| B1200_RS26110 () | 18464..19186 | + | 723 | WP_001568073.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| B1200_RS26115 () | 19285..19869 | + | 585 | WP_001568072.1 | fertility inhibition protein FinO | - |
| B1200_RS26120 () | 19988..20776 | + | 789 | WP_001568071.1 | DsbA family protein | - |
| B1200_RS26125 () | 20780..21316 | + | 537 | WP_001568070.1 | Phospholipase D | VF |
| B1200_RS26130 () | 21453..21722 | + | 270 | WP_001568069.1 | replication regulatory protein RepA | - |
| B1200_RS26135 () | 21939..22013 | + | 75 | WP_071594637.1 | RepA leader peptide Tap | - |
| B1200_RS26140 () | 21994..22887 | + | 894 | WP_101706504.1 | incFII family plasmid replication initiator RepA | - |
| B1200_RS26150 () | 24299..24775 | + | 477 | WP_045341329.1 | hypothetical protein | - |
| B1200_RS26155 () | 24877..25797 | - | 921 | WP_045341327.1 | hypothetical protein | - |
| B1200_RS26160 () | 26305..28089 | - | 1785 | WP_032635024.1 | ATP-dependent helicase | - |
| B1200_RS26165 () | 28086..30224 | - | 2139 | WP_032635023.1 | AAA family ATPase | - |
| B1200_RS26170 () | 30358..31353 | - | 996 | WP_032635071.1 | IS110 family transposase IS1663 | Transposase |
| B1200_RS26175 () | 31850..32737 | - | 888 | WP_023304027.1 | hypothetical protein | - |
| B1200_RS26180 () | 32752..33159 | - | 408 | WP_023304028.1 | hypothetical protein | - |
| B1200_RS26185 () | 33303..34838 | + | 1536 | Protein_28 | IS3 family transposase ISKpn38 | Transposase |
| B1200_RS26190 () | 34903..35508 | - | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| B1200_RS26195 () | 35603..38500 | + | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| B1200_RS26200 () | 38534..39364 | + | 831 | Protein_31 | MFS transporter | - |
| B1200_RS26205 () | 39395..39796 | - | 402 | WP_004099044.1 | hypothetical protein | - |
| B1200_RS26210 () | 39903..40352 | - | 450 | WP_004099042.1 | hypothetical protein | - |
| B1200_RS26215 () | 40440..41012 | - | 573 | WP_004099040.1 | hypothetical protein | - |
| B1200_RS26220 () | 41104..42072 | - | 969 | WP_023338002.1 | magnesium and cobalt transport protein CorA | - |
| B1200_RS26225 () | 42069..42773 | - | 705 | WP_005006007.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| B1200_RS26230 () | 42914..43453 | - | 540 | WP_023294902.1 | Peptide methionine sulfoxide reductase MsrA | VF |
| B1200_RS26235 () | 43455..43898 | - | 444 | WP_023338003.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| B1200_RS26240 () | 44045..44920 | - | 876 | WP_011191349.1 | LysR family transcriptional regulator | - |
| B1200_RS26245 () | 45149..46381 | + | 1233 | WP_004357650.1 | bifunctional alpha/beta hydrolase/OsmC family protein | - |
| B1200_RS26250 () | 46384..46977 | + | 594 | WP_025760400.1 | Peptide methionine sulfoxide reductase MsrA | VF |
| B1200_RS26255 () | 46980..48002 | + | 1023 | WP_004099029.1 | Zinc-type alcohol dehydrogenase-like protein | VF |
| B1200_RS26260 () | 48399..48893 | - | 495 | WP_004099028.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| B1200_RS26265 () | 49210..49392 | - | 183 | WP_004357657.1 | hypothetical protein | - |
| B1200_RS26270 () | 49451..49939 | - | 489 | WP_004099027.1 | DUF417 family protein | - |
| B1200_RS26275 () | 50619..51323 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| B1200_RS26280 () | 51527..52003 | - | 477 | WP_001567386.1 | DM13 domain-containing protein | - |
| B1200_RS26285 () | 52096..52362 | - | 267 | WP_001567387.1 | DUF1471 domain-containing protein | - |
| B1200_RS26290 () | 52503..53123 | + | 621 | WP_001567388.1 | TetR/AcrR family transcriptional regulator | - |
| B1200_RS26295 () | 53322..53450 | - | 129 | Protein_50 | aminotransferase | - |
| B1200_RS26300 () | 53584..54453 | - | 870 | WP_001567390.1 | DMT family transporter | - |
| B1200_RS26305 () | 54694..55446 | + | 753 | WP_004729622.1 | alpha/beta hydrolase | - |
| B1200_RS29780 () | 55497..55786 | + | 290 | Protein_53 | Tn3 family transposase | - |
| B1200_RS26310 () | 55886..56890 | + | 1005 | WP_001567384.1 | IS110 family transposase IS4321R | Transposase |
| B1200_RS26315 () | 57166..58938 | + | 1773 | Protein_55 | Tn3 family transposase TnpA_TnShfr1 | Transposase |
| B1200_RS26320 () | 59017..60021 | + | 1005 | WP_000427614.1 | IS110 family transposase IS5075 | Transposase |
| B1200_RS26330 () | 60743..61237 | - | 495 | WP_045344927.1 | Peptide methionine sulfoxide reductase MsrA 3 | VF |
| B1200_RS26335 () | 61227..61688 | - | 462 | WP_001567378.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| B1200_RS30160 () | 61712..61849 | - | 138 | WP_021243014.1 | hypothetical protein | - |
| B1200_RS26340 () | 61923..62429 | - | 507 | WP_001567380.1 | DUF417 family protein | - |
| B1200_RS26345 () | 62460..62720 | - | 261 | WP_001567381.1 | DUF1471 domain-containing protein | - |
| B1200_RS26350 () | 62933..63490 | - | 558 | WP_001567382.1 | hypothetical protein | VF |
| B1200_RS26355 () | 63587..63853 | - | 267 | WP_001567383.1 | DUF1471 domain-containing protein | - |
| B1200_RS26360 () | 64227..64544 | - | 318 | Protein_64 | IS110 family transposase IS4321R | Transposase |
| B1200_RS26365 () | 64598..65302 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| B1200_RS26370 () | 65327..65560 | + | 234 | WP_162781985.1 | hypothetical protein | - |
| B1200_RS26375 () | 66176..66511 | - | 336 | WP_000046891.1 | thermonuclease family protein | - |
| B1200_RS26385 () | 66754..67317 | + | 564 | WP_001515734.1 | IS66 family transposase ISPpu13 | Transposase |
| B1200_RS26390 () | 67382..67756 | + | 375 | WP_001348195.1 | cupin domain-containing protein | - |
| B1200_RS26395 () | 67780..68343 | + | 564 | WP_001097412.1 | chlorite dismutase family protein | - |
| B1200_RS26400 () | 68594..69691 | - | 1098 | Protein_71 | IS66 family transposase ISPsy43 | Transposase |
| B1200_RS26410 () | 69745..70449 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| B1200_RS26415 () | 70496..70732 | - | 237 | WP_001348075.1 | AAA family ATPase | - |
| B1200_RS26420 () | 70806..71222 | - | 417 | WP_016236302.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| B1200_RS26425 () | 71219..71449 | - | 231 | WP_001261282.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| B1200_RS26430 () | 71406..71828 | + | 423 | WP_162781986.1 | hypothetical protein | - |
| B1200_RS26440 () | 72037..72255 | + | 219 | WP_004197642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| B1200_RS26445 () | 72257..72562 | + | 306 | WP_004197633.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| B1200_RS26450 () | 72731..73132 | + | 402 | WP_072199347.1 | hypothetical protein | - |
| B1200_RS26455 () | 73159..73482 | + | 324 | WP_004197641.1 | hypothetical protein | - |
| B1200_RS26460 () | 73479..74495 | + | 1017 | WP_004197639.1 | hypothetical protein | - |
| B1200_RS26465 () | 74693..75487 | + | 795 | WP_004197635.1 | site-specific integrase | - |
| B1200_RS30170 () | 75574..75771 | - | 198 | WP_021312488.1 | hypothetical protein | - |
| B1200_RS26470 () | 75927..76106 | - | 180 | WP_006788217.1 | hypothetical protein | - |
| B1200_RS26475 () | 76226..76852 | - | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| B1200_RS26480 () | 77500..78375 | - | 876 | WP_004197644.1 | RepB family plasmid replication initiator protein | - |
| B1200_RS26485 () | 78787..80058 | - | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
| B1200_RS26490 () | 80058..80489 | - | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| B1200_RS26500 () | 80896..82383 | + | 1488 | WP_162781987.1 | Group II intron-encoded protein LtrA | VF |
| B1200_RS26505 () | 82632..83603 | + | 972 | WP_001568038.1 | hypothetical protein | - |
| B1200_RS26510 () | 83606..84277 | + | 672 | WP_015345000.1 | plasmid partitioning/stability family protein | - |
| B1200_RS26515 () | 84340..84570 | + | 231 | WP_001568040.1 | hypothetical protein | - |
| B1200_RS30330 () | 84733..84935 | + | 203 | Protein_93 | hypothetical protein | - |
| B1200_RS26525 () | 85007..85708 | + | 702 | WP_011977792.1 | DNA methylase | - |
| B1200_RS26530 () | 85708..85929 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| B1200_RS26535 () | 85939..86358 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| B1200_RS26540 () | 86412..87179 | + | 768 | WP_001568044.1 | hypothetical protein | - |
| B1200_RS30335 () | 88104..88532 | + | 429 | WP_001568045.1 | antirestriction protein | - |
| B1200_RS26550 () | 88575..89081 | + | 507 | WP_001568046.1 | antirestriction protein ArdA | - |
| B1200_RS26555 () | 89124..89315 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| B1200_RS26560 () | 89503..89757 | + | 255 | WP_024191981.1 | DNA polymerase III subunit theta | - |
| B1200_RS26565 () | 89792..90112 | + | 321 | WP_001568049.1 | hypothetical protein | - |
| B1200_RS26580 () | 90792..91019 | + | 228 | WP_001568050.1 | hypothetical protein | - |
| B1200_RS26585 () | 91111..91341 | + | 231 | WP_001568051.1 | hypothetical protein | - |
| B1200_RS26590 () | 91393..92748 | + | 1356 | WP_001568052.1 | DUF3560 domain-containing protein | - |
| B1200_RS26595 () | 92796..93362 | + | 567 | WP_001568053.1 | methyltransferase | - |
| B1200_RS26615 () | 94183..95004 | + | 822 | WP_001568111.1 | DUF945 domain-containing protein | - |
| B1200_RS26620 () | 95037..95366 | + | 330 | WP_011977736.1 | hypothetical protein | - |
| B1200_RS26625 () | 95399..95884 | - | 486 | WP_001568108.1 | hypothetical protein | VF |
| B1200_RS26630 () | 96306..96692 | + | 387 | WP_001568107.1 | relaxosome protein TraM | - |
| B1200_RS26635 () | 96912..97601 | + | 690 | WP_001568106.1 | hypothetical protein | - |
| B1200_RS26640 () | 97776..97940 | + | 165 | WP_071594636.1 | TraY domain-containing protein | - |
| B1200_RS26645 () | 98019..98387 | + | 369 | WP_001568105.1 | type IV conjugative transfer system pilin TraA | - |
| B1200_RS26650 () | 98467..98835 | + | 369 | WP_001568104.1 | type IV conjugative transfer system pilin TraA | - |
| B1200_RS26655 () | 98849..99154 | + | 306 | WP_024191986.1 | type IV conjugative transfer system protein TraL | - |
| B1200_RS26660 () | 99173..99739 | + | 567 | WP_001568102.1 | type IV conjugative transfer system protein TraE | - |
| B1200_RS26665 () | 99726..100466 | + | 741 | WP_001568101.1 | type-F conjugative transfer system secretin TraK | - |
| B1200_RS26670 () | 100466..101878 | + | 1413 | WP_001568100.1 | conjugal transfer protein TraB | - |
| B1200_RS26675 () | 101871..102107 | + | 237 | WP_001568098.1 | hypothetical protein | - |
| B1200_RS26680 () | 102126..102695 | + | 570 | WP_001568094.1 | type IV conjugative transfer system lipoprotein TraV | - |
| B1200_RS26685 () | 103034..103222 | + | 189 | WP_024191985.1 | hypothetical protein | - |
| B1200_RS26690 () | 103227..103625 | + | 399 | WP_001568092.1 | hypothetical protein | - |
| B1200_RS26695 () | 103627..104013 | + | 387 | WP_001568091.1 | hypothetical protein | - |
| B1200_RS26700 () | 104088..106727 | + | 2640 | WP_001568090.1 | type IV secretion system protein TraC | - |
| B1200_RS26705 () | 106727..107104 | + | 378 | WP_001568089.1 | type-F conjugative transfer system protein TrbI | - |
| B1200_RS26710 () | 107101..107730 | + | 630 | WP_001568088.1 | type-F conjugative transfer system protein TraW | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|