MGE detailed information
MGE type: Prophage MGE length: 73745 bp
Accession: NZ_CP019689 Location: 4354680..4428424 Organism: Shigella sonnei strain 75/02 Replicon: chromosome
Accession: NZ_CP019689 Location: 4354680..4428424 Organism: Shigella sonnei strain 75/02 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BZ172_RS23700 (4350476) | 4350476..4351171 | + | 696 | WP_000893462.1 | dethiobiotin synthase | - |
| BZ172_RS23705 (4351124) | 4351124..4352416 | - | 1293 | WP_071787903.1 | voltage-gated ClC-type chloride channel ClcB | - |
| BZ172_RS23710 (4352575) | 4352575..4353189 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| BZ172_RS23715 (4353232) | 4353232..4354086 | - | 855 | WP_000526502.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| BZ172_RS23720 (4354088) | 4354088..4354630 | - | 543 | Protein_4238 | dimethylsulfoxide reductase subunit B | - |
| BZ172_RS23725 (4354680) | 4354680..4355843 | - | 1164 | WP_000051896.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| BZ172_RS30010 (4355994) | 4355994..4356070 | - | 77 | Protein_4240 | DNA-binding protein | - |
| BZ172_RS23735 (4356105) | 4356105..4356356 | - | 252 | WP_000497813.1 | DUF4222 domain-containing protein | - |
| BZ172_RS23740 (4356404) | 4356404..4357084 | - | 681 | WP_000187058.1 | YqaJ viral recombinase family protein | - |
| BZ172_RS23745 (4357081) | 4357081..4357866 | - | 786 | WP_000100822.1 | phage recombination protein Bet | - |
| BZ172_RS23750 (4357872) | 4357872..4358168 | - | 297 | WP_000995034.1 | host-nuclease inhibitor Gam family protein | - |
| BZ172_RS23755 (4358165) | 4358165..4360213 | - | 2049 | WP_050866382.1 | exodeoxyribonuclease VIII | - |
| BZ172_RS23760 (4360322) | 4360322..4360708 | - | 387 | WP_050866383.1 | hypothetical protein | - |
| BZ172_RS23765 (4360794) | 4360794..4361015 | - | 222 | WP_000560216.1 | cell division protein FtsZ | - |
| BZ172_RS23770 (4361347) | 4361347..4361703 | - | 357 | WP_001005965.1 | hypothetical protein | - |
| BZ172_RS23775 (4361735) | 4361735..4362448 | - | 714 | WP_094112553.1 | hypothetical protein | - |
| BZ172_RS23780 (4362452) | 4362452..4362724 | - | 273 | WP_000088198.1 | hypothetical protein | - |
| BZ172_RS23785 (4362702) | 4362702..4362876 | - | 175 | Protein_4251 | hypothetical protein | - |
| BZ172_RS23790 (4363119) | 4363119..4363889 | - | 771 | WP_000239215.1 | helix-turn-helix transcriptional regulator | - |
| BZ172_RS23795 (4363974) | 4363974..4364201 | + | 228 | WP_001068241.1 | hypothetical protein | - |
| BZ172_RS23800 (4364345) | 4364345..4364641 | + | 297 | WP_000084292.1 | CII family transcriptional regulator | - |
| BZ172_RS23805 (4364656) | 4364656..4364874 | + | 219 | WP_000438870.1 | hypothetical protein | - |
| BZ172_RS23810 (4364895) | 4364895..4365983 | + | 1089 | WP_094112554.1 | DNA-binding protein | - |
| BZ172_RS23815 (4365990) | 4365990..4366730 | + | 741 | WP_000790395.1 | ATP-binding protein | - |
| BZ172_RS23820 (4366756) | 4366756..4367526 | + | 771 | WP_000450880.1 | DUF1627 domain-containing protein | - |
| BZ172_RS23825 (4367541) | 4367541..4367972 | + | 432 | WP_001151119.1 | DUF977 family protein | - |
| BZ172_RS23830 (4368005) | 4368005..4368679 | - | 675 | WP_000060692.1 | DUF4145 domain-containing protein | - |
| BZ172_RS23835 (4368678) | 4368678..4368923 | + | 246 | WP_000354190.1 | hypothetical protein | - |
| BZ172_RS23840 (4368978) | 4368978..4369286 | - | 309 | WP_047199903.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| BZ172_RS23845 (4369276) | 4369276..4369617 | - | 342 | WP_225380621.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BZ172_RS23850 (4369783) | 4369783..4370259 | + | 477 | WP_238584173.1 | hypothetical protein | - |
| BZ172_RS23855 (4370271) | 4370271..4370942 | + | 672 | WP_001624511.1 | hypothetical protein | - |
| BZ172_RS23860 (4370962) | 4370962..4371336 | - | 375 | WP_001624512.1 | DUF805 domain-containing protein | - |
| BZ172_RS23865 (4371681) | 4371681..4372349 | + | 669 | WP_047199905.1 | ORF6N domain-containing protein | - |
| BZ172_RS23870 (4372404) | 4372404..4372814 | + | 411 | WP_047199906.1 | recombination protein NinB | - |
| BZ172_RS23875 (4372811) | 4372811..4373002 | + | 192 | WP_001254268.1 | NinE family protein | - |
| BZ172_RS23880 (4373026) | 4373026..4373316 | + | 291 | WP_050866488.1 | DUF1364 domain-containing protein | - |
| BZ172_RS23885 (4373313) | 4373313..4373675 | + | 363 | WP_050866487.1 | RusA family crossover junction endodeoxyribonuclease | - |
| BZ172_RS23890 (4373675) | 4373675..4373869 | + | 195 | WP_000992060.1 | protein ninH | - |
| BZ172_RS23895 (4373862) | 4373862..4374242 | + | 381 | WP_001204861.1 | antiterminator Q family protein | - |
| BZ172_RS23900 (4374375) | 4374375..4374968 | + | 594 | WP_094112555.1 | hypothetical protein | - |
| BZ172_RS23910 (4375543) | 4375543..4376490 | + | 948 | WP_000691354.1 | hypothetical protein | VF |
| BZ172_RS23915 (4376500) | 4376500..4376769 | + | 270 | WP_000752026.1 | hypothetical protein | VF |
| BZ172_RS30015 (4376867) | 4376867..4376986 | - | 120 | Protein_4277 | hypothetical protein | - |
| BZ172_RS23920 (4377251) | 4377251..4379188 | + | 1938 | WP_094112556.1 | SASA family carbohydrate esterase | - |
| BZ172_RS23925 (4379323) | 4379323..4379502 | + | 180 | WP_000143458.1 | DUF1378 family protein | - |
| BZ172_RS23930 (4379429) | 4379429..4379815 | + | 387 | WP_252988436.1 | DUF826 domain-containing protein | - |
| BZ172_RS23935 (4379892) | 4379892..4380107 | + | 216 | WP_000284506.1 | class II holin family protein | - |
| BZ172_RS23940 (4380112) | 4380112..4380645 | + | 534 | WP_000087461.1 | lysozyme | - |
| BZ172_RS23945 (4380920) | 4380920..4381489 | + | 570 | WP_001056885.1 | phage antirepressor N-terminal domain-containing protein | - |
| BZ172_RS29390 (4381489) | 4381489..4381638 | + | 150 | WP_000455406.1 | hypothetical protein | - |
| BZ172_RS23950 (4381646) | 4381646..4382110 | + | 465 | WP_001082654.1 | lysis protein | - |
| BZ172_RS23955 (4382142) | 4382142..4382435 | - | 294 | WP_000738505.1 | serum resistance lipoprotein Bor | - |
| BZ172_RS23965 (4382844) | 4382844..4383650 | + | 807 | WP_001086073.1 | terminase | - |
| BZ172_RS23970 (4383631) | 4383631..4385337 | + | 1707 | WP_000143988.1 | terminase | - |
| BZ172_RS23975 (4385337) | 4385337..4387481 | + | 2145 | WP_000787036.1 | portal protein | - |
| BZ172_RS23980 (4387639) | 4387639..4388646 | + | 1008 | WP_032330626.1 | hypothetical protein | - |
| BZ172_RS23985 (4388670) | 4388670..4389884 | + | 1215 | WP_000214474.1 | N4-gp56 family major capsid protein | - |
| BZ172_RS23990 (4389940) | 4389940..4390329 | + | 390 | WP_001140444.1 | hypothetical protein | - |
| BZ172_RS23995 (4390379) | 4390379..4390840 | + | 462 | WP_033800770.1 | hypothetical protein | - |
| BZ172_RS24000 (4390824) | 4390824..4391387 | + | 564 | WP_000829200.1 | hypothetical protein | - |
| BZ172_RS24005 (4391387) | 4391387..4392037 | + | 651 | WP_000207927.1 | hypothetical protein | - |
| BZ172_RS24010 (4392034) | 4392034..4394271 | + | 2238 | WP_094112557.1 | ISNCY family transposase KIS | Transposase |
| BZ172_RS24015 (4394358) | 4394358..4394870 | + | 513 | WP_000513231.1 | receptor recognizing protein Gp38 | - |
| BZ172_RS24020 (4395104) | 4395104..4396729 | + | 1626 | WP_044809851.1 | hypothetical protein | - |
| BZ172_RS24025 (4396726) | 4396726..4397994 | + | 1269 | WP_000197192.1 | DUF1983 domain-containing protein | - |
| BZ172_RS24030 (4398009) | 4398009..4398287 | + | 279 | WP_000455635.1 | hypothetical protein | - |
| BZ172_RS24035 (4398293) | 4398293..4398910 | + | 618 | WP_001301884.1 | hypothetical protein | - |
| BZ172_RS24040 (4399001) | 4399001..4399735 | + | 735 | WP_000835363.1 | hypothetical protein | VF |
| BZ172_RS24050 (4399968) | 4399968..4400108 | + | 141 | WP_000078907.1 | Hok/Gef family protein | - |
| BZ172_RS24055 (4400165) | 4400165..4400566 | + | 402 | WP_052901185.1 | hypothetical protein | - |
| BZ172_RS24060 (4400660) | 4400660..4401316 | + | 657 | WP_033804701.1 | hypothetical protein | - |
| BZ172_RS24065 (4401319) | 4401319..4401765 | + | 447 | WP_000455652.1 | hypothetical protein | - |
| BZ172_RS24070 (4401775) | 4401775..4402026 | + | 252 | WP_000540391.1 | bacteriocin | - |
| BZ172_RS24075 (4402037) | 4402037..4403302 | + | 1266 | WP_032330628.1 | hypothetical protein | - |
| BZ172_RS24080 (4403372) | 4403372..4411753 | + | 8382 | WP_094112559.1 | LPD5 domain-containing protein | - |
| BZ172_RS24090 (4412145) | 4412145..4412648 | - | 504 | WP_094112560.1 | DUF551 domain-containing protein | - |
| BZ172_RS30020 (4412645) | 4412645..4413160 | - | 516 | WP_001229204.1 | hypothetical protein | - |
| BZ172_RS24100 (4413162) | 4413162..4414112 | - | 951 | WP_024199259.1 | ead/Ea22-like family protein | - |
| BZ172_RS24105 (4414099) | 4414099..4414383 | - | 285 | WP_000020908.1 | DUF4752 family protein | - |
| BZ172_RS24110 (4414380) | 4414380..4414601 | - | 222 | WP_000763356.1 | TraR/DksA family transcriptional regulator | - |
| BZ172_RS24115 (4414649) | 4414649..4415272 | - | 624 | WP_000211516.1 | phage antirepressor Ant | - |
| BZ172_RS24120 (4415540) | 4415540..4415809 | - | 270 | Protein_4316 | antA/AntB antirepressor family protein | - |
| BZ172_RS24130 (4416235) | 4416235..4416339 | - | 105 | Protein_4317 | 4Fe-4S binding protein | - |
| BZ172_RS24135 (4416350) | 4416350..4417426 | - | 1077 | Protein_4318 | molybdopterin dinucleotide binding domain-containing protein | - |
| BZ172_RS24145 (4417484) | 4417484..4418181 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| BZ172_RS24150 (4418329) | 4418329..4418694 | - | 366 | WP_024174355.1 | hypothetical protein | - |
| BZ172_RS24155 (4418706) | 4418706..4418858 | - | 153 | WP_000379558.1 | DUF1391 family protein | - |
| BZ172_RS24160 (4419138) | 4419138..4419428 | - | 291 | WP_014334020.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BZ172_RS24165 (4419428) | 4419428..4419622 | - | 195 | WP_005142544.1 | hypothetical protein | Antitoxin Detail |
| BZ172_RS24170 (4419642) | 4419642..4420127 | - | 486 | WP_053002468.1 | helix-turn-helix domain-containing protein | - |
| BZ172_RS24175 (4420254) | 4420254..4420517 | + | 264 | WP_001048456.1 | helix-turn-helix transcriptional regulator | - |
| BZ172_RS24180 (4420514) | 4420514..4420939 | + | 426 | WP_000693826.1 | toxin YdaT family protein | - |
| BZ172_RS24185 (4421011) | 4421011..4422075 | + | 1065 | WP_001262380.1 | hypothetical protein | - |
| BZ172_RS24190 (4422082) | 4422082..4422828 | + | 747 | WP_000788740.1 | ATP-binding protein | - |
| BZ172_RS24195 (4422850) | 4422850..4423575 | + | 726 | WP_000450631.1 | DUF1627 domain-containing protein | - |
| BZ172_RS24200 (4423591) | 4423591..4424013 | + | 423 | WP_001151171.1 | DUF977 family protein | - |
| BZ172_RS24205 (4424071) | 4424071..4424427 | + | 357 | WP_005140877.1 | hypothetical protein | - |
| BZ172_RS24210 (4424642) | 4424642..4426474 | + | 1833 | WP_000113426.1 | N-6 DNA methylase | - |
| BZ172_RS24215 (4426471) | 4426471..4427553 | + | 1083 | WP_001053102.1 | BsuBI/PstI family type II restriction endonuclease | - |
| BZ172_RS30390 (4427594) | 4427594..4427719 | - | 126 | WP_005140887.1 | hypothetical protein | - |
| BZ172_RS24225 (4427761) | 4427761..4428458 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| BZ172_RS24230 (4428522) | 4428522..4429982 | + | 1461 | WP_000527756.1 | mannitol dehydrogenase family protein | - |
| BZ172_RS24235 (4430018) | 4430018..4430221 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| BZ172_RS24240 (4430398) | 4430398..4431084 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| BZ172_RS24245 (4431173) | 4431173..4431919 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|