MGE detailed information
MGE type: Prophage MGE length: 42046 bp
Accession: NZ_CP019574 Location: 830583..872628 Organism: Staphylococcus aureus strain USA400-0051 Replicon: chromosome
Accession: NZ_CP019574 Location: 830583..872628 Organism: Staphylococcus aureus strain USA400-0051 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAU400_RS04145 () | 825645..827162 | + | 1518 | WP_001085505.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| SAU400_RS04150 () | 827292..828596 | + | 1305 | WP_001121760.1 | phosphopyruvate hydratase | - |
| SAU400_RS04155 () | 828935..829393 | + | 459 | WP_000785252.1 | hypothetical protein | - |
| SAU400_RS04160 () | 829460..829693 | + | 234 | WP_000556760.1 | preprotein translocase subunit SecG | - |
| SAU400_RS04165 () | 829809..830549 | + | 741 | WP_001165958.1 | carboxylesterase | - |
| SAU400_RS04170 () | 830583..832955 | + | 2373 | WP_001050053.1 | ribonuclease R | - |
| SAU400_RS04175 () | 832977..833441 | + | 465 | WP_001085185.1 | SsrA-binding protein SmpB | - |
| SAU400_RS04185 () | 833997..834212 | - | 216 | WP_000586155.1 | hypothetical protein | - |
| SAU400_RS04190 () | 834224..835330 | - | 1107 | WP_025174195.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| SAU400_RS04195 () | 835345..836082 | - | 738 | WP_000583241.1 | helix-turn-helix transcriptional regulator | - |
| SAU400_RS04200 () | 836234..836452 | + | 219 | WP_000163543.1 | helix-turn-helix domain-containing protein | - |
| SAU400_RS14815 () | 836464..836610 | + | 147 | WP_000773732.1 | hypothetical protein | - |
| SAU400_RS04205 () | 836603..836827 | + | 225 | WP_001058500.1 | hypothetical protein | - |
| SAU400_RS04210 () | 836828..837127 | + | 300 | WP_001103961.1 | DUF1474 family protein | - |
| SAU400_RS04215 () | 837219..839591 | + | 2373 | WP_000985236.1 | primase | - |
| SAU400_RS04220 () | 840264..840608 | + | 345 | WP_001081425.1 | hypothetical protein | - |
| SAU400_RS04230 () | 840833..841039 | + | 207 | WP_000884055.1 | hypothetical protein | - |
| SAU400_RS04235 () | 841026..842084 | + | 1059 | WP_000657544.1 | phage capsid protein | - |
| SAU400_RS04240 () | 842265..842756 | + | 492 | WP_000253086.1 | hypothetical protein | - |
| SAU400_RS04245 () | 842753..842908 | + | 156 | WP_100292232.1 | terminase | - |
| SAU400_RS04250 () | 843117..844091 | + | 975 | Protein_779 | DUF4868 domain-containing protein | - |
| SAU400_RS04260 () | 844966..845520 | - | 555 | WP_001035625.1 | DUF4888 domain-containing protein | - |
| SAU400_RS04265 () | 846307..847107 | + | 801 | WP_001043551.1 | Enterotoxin type C-2 | VF |
| SAU400_RS04270 () | 847274..847997 | - | 724 | Protein_782 | Enterotoxin type A | VF |
| SAU400_RS04275 () | 848735..849463 | - | 729 | WP_000757407.1 | DUF5067 domain-containing protein | - |
| SAU400_RS04280 () | 849898..850053 | + | 156 | WP_001790158.1 | hypothetical protein | - |
| SAU400_RS04285 () | 850061..850581 | + | 521 | Protein_785 | hypothetical protein | - |
| SAU400_RS04290 () | 850720..851250 | + | 531 | WP_001167166.1 | N-acetyltransferase | - |
| SAU400_RS04295 () | 851512..854352 | + | 2841 | WP_001056172.1 | Clumping factor A | VF |
| SAU400_RS04300 () | 854573..856099 | + | 1527 | Protein_788 | Staphylocoagulase | VF |
| SAU400_RS04305 () | 856450..857472 | + | 1023 | WP_000728062.1 | extracellular matrix protein-binding adhesin Emp | - |
| SAU400_RS04310 () | 857807..858328 | + | 522 | WP_000824464.1 | Extracellular matrix protein-binding protein emp | VF |
| SAU400_RS04315 () | 858669..859355 | + | 687 | WP_001793574.1 | thermonuclease family protein | - |
| SAU400_RS04320 () | 859712..859912 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| SAU400_RS04325 () | 860408..860626 | - | 219 | WP_000005886.1 | hypothetical protein | - |
| SAU400_RS04330 () | 860688..860972 | - | 285 | WP_001004401.1 | hypothetical protein | - |
| SAU400_RS04335 () | 861060..861629 | - | 570 | WP_001106654.1 | hypothetical protein | - |
| SAU400_RS04340 () | 861817..862005 | - | 189 | WP_000052076.1 | hypothetical protein | Toxin Detail |
| SAU400_RS04345 () | 862034..862294 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| SAU400_RS04350 () | 862634..862837 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| SAU400_RS04355 () | 862834..863070 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| SAU400_RS04360 () | 863294..863875 | + | 582 | WP_001140696.1 | phosphoglycerate mutase family protein | - |
| SAU400_RS04365 () | 863971..864564 | - | 594 | Protein_801 | amino acid transporter | - |
| SAU400_RS04370 () | 864719..865213 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| SAU400_RS04375 () | 865612..866034 | - | 423 | WP_000974464.1 | organic hydroperoxide resistance protein | - |
| SAU400_RS04380 () | 866182..866898 | + | 717 | WP_000150012.1 | type I 3-dehydroquinate dehydratase | - |
| SAU400_RS04385 () | 866981..867520 | + | 540 | WP_000422910.1 | nitroreductase | - |
| SAU400_RS04390 () | 867670..867990 | - | 321 | WP_001147953.1 | thioredoxin family protein | - |
| SAU400_RS04395 () | 868134..868490 | + | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| SAU400_RS04400 () | 868648..869028 | + | 381 | WP_000290489.1 | glycine cleavage system protein GcvH | - |
| SAU400_RS04410 () | 869207..870085 | + | 879 | WP_000932228.1 | DUF1963 domain-containing protein | - |
| SAU400_RS04425 () | 870823..871209 | + | 387 | WP_001018962.1 | toprim domain-containing protein | - |
| SAU400_RS04430 () | 871202..871498 | + | 297 | WP_001065801.1 | thioredoxin family protein | - |
| SAU400_RS04435 () | 871747..872771 | + | 1025 | Protein_812 | Methionine import ATP-binding protein MetN 2 | VF |
| SAU400_RS04440 () | 872764..873459 | + | 696 | WP_000520233.1 | ABC transporter permease | - |
| SAU400_RS04445 () | 873477..874298 | + | 822 | WP_000732326.1 | MetQ/NlpA family ABC transporter substrate-binding protein | - |
| SAU400_RS04450 () | 874652..874846 | + | 195 | WP_000752917.1 | CsbD family protein | - |
| SAU400_RS04455 () | 875079..875930 | - | 852 | WP_001183858.1 | DUF368 domain-containing protein | - |
| SAU400_RS04460 () | 876258..877019 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus MW2 | Prophage | TA20726 | NC_003923 | 836064..878267 | 0 |