MGE detailed information
MGE type: Prophage MGE length: 55498 bp
Accession: NZ_CP019574 Location: 2041482..2096979 Organism: Staphylococcus aureus strain USA400-0051 Replicon: chromosome
Accession: NZ_CP019574 Location: 2041482..2096979 Organism: Staphylococcus aureus strain USA400-0051 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAU400_RS10490 () | 2037672..2037977 | - | 306 | Protein_1927 | MAP domain-containing protein | - |
| SAU400_RS10495 () | 2037959..2039722 | - | 1764 | WP_100292245.1 | extracellular adherence protein Eap/Map | - |
| SAU400_RS10500 () | 2040107..2040357 | + | 251 | Protein_1929 | sphingomyelin phosphodiesterase | - |
| SAU400_RS10505 () | 2040679..2040858 | + | 180 | WP_000669791.1 | hypothetical protein | - |
| SAU400_RS10515 () | 2041169..2041429 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| SAU400_RS10520 () | 2041482..2041832 | - | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| SAU400_RS10525 () | 2042343..2042678 | - | 336 | Protein_1933 | SH3 domain-containing protein | - |
| SAU400_RS10545 () | 2043329..2043820 | - | 492 | WP_000920039.1 | Staphylokinase | VF |
| SAU400_RS10550 () | 2044011..2044766 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| SAU400_RS10555 () | 2044778..2045032 | - | 255 | WP_000611512.1 | phage holin | - |
| SAU400_RS10560 () | 2045084..2045191 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 2045113..2045252 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2045113..2045252 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2045113..2045252 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2045113..2045252 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| SAU400_RS10565 () | 2045244..2045420 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| SAU400_RS10570 () | 2045528..2046301 | - | 774 | WP_000750412.1 | Enterotoxin type A | VF |
| SAU400_RS10575 () | 2046674..2047048 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| SAU400_RS10580 () | 2047104..2047391 | - | 288 | WP_001262624.1 | hypothetical protein | - |
| SAU400_RS10585 () | 2047437..2047589 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| SAU400_RS10590 () | 2047582..2051364 | - | 3783 | WP_000582131.1 | hypothetical protein | - |
| SAU400_RS10595 () | 2051380..2052870 | - | 1491 | WP_001154317.1 | phage tail family protein | - |
| SAU400_RS10600 () | 2052870..2057519 | - | 4650 | WP_001133533.1 | phage tail tape measure protein | - |
| SAU400_RS10605 () | 2057575..2057697 | - | 123 | WP_000570353.1 | hypothetical protein | - |
| SAU400_RS10610 () | 2057757..2058203 | - | 447 | WP_000442601.1 | hypothetical protein | - |
| SAU400_RS10615 () | 2058268..2059221 | - | 954 | WP_000570652.1 | Ig-like domain-containing protein | - |
| SAU400_RS10620 () | 2059222..2059602 | - | 381 | WP_000611454.1 | hypothetical protein | - |
| SAU400_RS10625 () | 2059599..2059976 | - | 378 | WP_000501244.1 | HK97 gp10 family phage protein | - |
| SAU400_RS10630 () | 2059976..2060311 | - | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| SAU400_RS10635 () | 2060298..2060630 | - | 333 | WP_001177483.1 | head-tail connector protein | - |
| SAU400_RS10640 () | 2060639..2060797 | - | 159 | WP_001252099.1 | hypothetical protein | - |
| SAU400_RS10645 () | 2060833..2062080 | - | 1248 | WP_000849950.1 | phage major capsid protein | - |
| SAU400_RS10650 () | 2062168..2062752 | - | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| SAU400_RS10655 () | 2062745..2063995 | - | 1251 | WP_000511065.1 | phage portal protein | - |
| SAU400_RS10660 () | 2064001..2064201 | - | 201 | WP_000365299.1 | hypothetical protein | - |
| SAU400_RS10665 () | 2064215..2065909 | - | 1695 | WP_000133304.1 | phage terminase large subunit | - |
| SAU400_RS10670 () | 2065912..2066379 | - | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| SAU400_RS10675 () | 2066508..2066852 | - | 345 | WP_000817289.1 | HNH endonuclease | - |
| SAU400_RS10680 () | 2066868..2067320 | - | 453 | WP_000406191.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| SAU400_RS10685 () | 2067435..2067905 | - | 471 | WP_000282755.1 | hypothetical protein | - |
| SAU400_RS10695 () | 2067928..2068128 | - | 201 | WP_001570807.1 | DUF1514 family protein | - |
| SAU400_RS10700 () | 2068128..2068775 | - | 648 | Protein_1964 | hypothetical protein | - |
| SAU400_RS10705 () | 2068934..2069083 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| SAU400_RS10710 () | 2069080..2069175 | - | 96 | Protein_1966 | DUF1381 domain-containing protein | - |
| SAU400_RS10715 () | 2069160..2069411 | - | 252 | Protein_1967 | hypothetical protein | - |
| SAU400_RS10720 () | 2069424..2069828 | - | 405 | WP_000401978.1 | RusA family crossover junction endodeoxyribonuclease | - |
| SAU400_RS10725 () | 2069837..2070055 | - | 219 | WP_000338527.1 | hypothetical protein | - |
| SAU400_RS10730 () | 2070062..2070955 | - | 894 | WP_000148328.1 | DnaD domain-containing protein | - |
| SAU400_RS10735 () | 2070985..2071455 | - | 471 | WP_000934765.1 | single-stranded DNA-binding protein | - |
| SAU400_RS10740 () | 2071456..2072073 | - | 618 | WP_072353921.1 | MBL fold metallo-hydrolase | - |
| SAU400_RS10745 () | 2072154..2073074 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| SAU400_RS10750 () | 2073076..2075031 | - | 1956 | WP_047211354.1 | AAA family ATPase | - |
| SAU400_RS10755 () | 2075028..2075291 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| SAU400_RS10760 () | 2075300..2075560 | - | 261 | WP_000291488.1 | hypothetical protein ; Integrase | Integrase |
| SAU400_RS10765 () | 2075653..2075814 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| SAU400_RS10770 () | 2075811..2076131 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| SAU400_RS10775 () | 2076190..2076822 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| SAU400_RS10780 () | 2076837..2076977 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| SAU400_RS10785 () | 2077008..2077205 | - | 198 | WP_001148861.1 | hypothetical protein | - |
| SAU400_RS10790 () | 2077221..2077971 | - | 751 | Protein_1982 | phage antirepressor KilAC domain-containing protein | - |
| SAU400_RS10795 () | 2078028..2078567 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| SAU400_RS10800 () | 2078591..2078851 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| SAU400_RS10805 () | 2078869..2079093 | - | 225 | WP_000338186.1 | DUF739 family protein | - |
| SAU400_RS10810 () | 2079252..2080022 | + | 771 | WP_001208482.1 | helix-turn-helix domain-containing protein | - |
| SAU400_RS10815 () | 2080218..2080946 | + | 729 | WP_001033320.1 | Enterotoxin type A | VF |
| SAU400_RS10820 () | 2080970..2081698 | + | 729 | WP_000733771.1 | Enterotoxin type A | VF |
| SAU400_RS10825 () | 2081782..2082819 | + | 1038 | WP_000857194.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| SAU400_RS10830 () | 2082870..2083700 | + | 831 | Protein_1990 | Phospholipase C | VF |
| SAU400_RS10835 () | 2083938..2084954 | - | 1017 | WP_000595401.1 | putative leukocidin-like protein 1 | VF |
| SAU400_RS10840 () | 2084976..2086028 | - | 1053 | WP_000791417.1 | putative leukocidin-like protein 2 | VF |
| SAU400_RS10845 () | 2086464..2087687 | + | 1224 | WP_000206623.1 | ArgE/DapE family deacylase | - |
| SAU400_RS10850 () | 2088059..2088904 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| SAU400_RS10855 () | 2088950..2089879 | - | 930 | WP_100292246.1 | Iron(3+)-hydroxamate-binding protein FhuD | VF |
| SAU400_RS10860 () | 2090040..2091347 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| SAU400_RS10870 () | 2092200..2092643 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| SAU400_RS10875 () | 2092808..2093185 | - | 378 | WP_001797573.1 | hypothetical protein | - |
| SAU400_RS10880 () | 2093502..2094092 | - | 591 | WP_001293059.1 | terminase small subunit | - |
| SAU400_RS10885 () | 2094089..2094301 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| SAU400_RS10890 () | 2094362..2094908 | + | 547 | Protein_2001 | site-specific integrase | - |
| SAU400_RS10895 () | 2095003..2096619 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| SAU400_RS10900 () | 2096695..2096979 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| SAU400_RS10905 () | 2097154..2097896 | + | 743 | Protein_2004 | CPBP family intramembrane metalloprotease | - |
| SAU400_RS10910 () | 2097921..2099180 | - | 1260 | WP_000120305.1 | hypothetical protein | - |
| SAU400_RS10915 () | 2099377..2100003 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| SAU400_RS10920 () | 2100364..2101149 | + | 786 | WP_000867941.1 | carbon-nitrogen family hydrolase | - |
| SAU400_RS10925 () | 2101746..2101880 | - | 135 | WP_001823225.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus MW2 | Prophage | TA10154 | NC_003923 | 2047408..2102909 | 0 |