MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 114001 bp
Accession: NZ_CP019439 Location: 1..114001 Organism: Thioclava nitratireducens strain 25B10_4 Replicon: plasmid unnamed2
Accession: NZ_CP019439 Location: 1..114001 Organism: Thioclava nitratireducens strain 25B10_4 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BMG03_RS19930 () | 270..1013 | - | 744 | WP_075777170.1 | Poly-beta-1,6-N-acetyl-D-glucosamine synthase | VF |
| BMG03_RS19935 () | 1010..1583 | - | 574 | Protein_2 | VTT domain-containing protein | - |
| BMG03_RS19940 () | 1588..2721 | - | 1134 | Protein_3 | glycosyltransferase | - |
| BMG03_RS19950 () | 3936..5310 | - | 1375 | Protein_4 | IS1380 family transposase | - |
| BMG03_RS19955 () | 5771..6151 | + | 381 | WP_077701437.1 | DUF1232 domain-containing protein | - |
| BMG03_RS19960 () | 6179..7282 | - | 1104 | WP_077701438.1 | patatin-like phospholipase family protein | - |
| BMG03_RS19965 () | 7423..7946 | + | 524 | Protein_7 | DUF1269 domain-containing protein | - |
| BMG03_RS19970 () | 7946..8128 | + | 183 | WP_075777354.1 | DUF3096 domain-containing protein | - |
| BMG03_RS19975 () | 8180..8425 | + | 246 | WP_075777355.1 | hypothetical protein | - |
| BMG03_RS19980 () | 8430..9407 | + | 978 | WP_075777356.1 | Multidrug resistance protein MdtN | VF |
| BMG03_RS19985 () | 9428..10948 | + | 1521 | WP_075777380.1 | Multidrug export protein EmrB | VF |
| BMG03_RS19990 () | 10959..11579 | + | 621 | WP_077701439.1 | hypothetical protein | - |
| BMG03_RS19995 () | 11612..12304 | - | 693 | WP_075777357.1 | VIT family protein | - |
| BMG03_RS20000 () | 12291..12840 | - | 550 | Protein_14 | HAMP domain-containing histidine kinase | - |
| BMG03_RS20005 () | 12869..13108 | - | 240 | WP_077701440.1 | IS3 family transposase ISGxy1 | Transposase |
| BMG03_RS20010 () | 13179..14255 | - | 1077 | WP_075777359.1 | IS110 family transposase ISMch6 | Transposase |
| BMG03_RS20015 () | 14506..15078 | - | 573 | WP_077701441.1 | IS3 family transposase ISMch1 | Transposase |
| BMG03_RS20020 () | 15099..15377 | - | 279 | WP_077701442.1 | IS3 family transposase ISMch1 | Transposase |
| BMG03_RS20840 () | 15528..15746 | - | 219 | WP_075777362.1 | hypothetical protein | - |
| BMG03_RS20025 () | 15787..16410 | - | 624 | WP_077701443.1 | DedA family protein | - |
| BMG03_RS20030 () | 16410..17117 | - | 708 | WP_077701444.1 | DUF502 domain-containing protein | - |
| BMG03_RS20035 () | 17339..17668 | + | 330 | WP_077701445.1 | DUF202 domain-containing protein | - |
| BMG03_RS20040 () | 17618..18517 | - | 900 | WP_077701446.1 | mechanosensitive ion channel family protein | - |
| BMG03_RS20045 () | 18530..19705 | + | 1176 | WP_157771627.1 | magnesium/cobalt transporter CorA | - |
| BMG03_RS20050 () | 19882..20902 | + | 1021 | Protein_25 | trypsin-like peptidase domain-containing protein | - |
| BMG03_RS20055 () | 21022..23652 | + | 2631 | WP_075777610.1 | bifunctional lysylphosphatidylglycerol flippase/synthetase MprF | - |
| BMG03_RS20060 () | 23781..25276 | + | 1496 | Protein_27 | multicopper oxidase domain-containing protein | - |
| BMG03_RS20065 () | 25537..25923 | + | 387 | WP_075777611.1 | DUF302 domain-containing protein | - |
| BMG03_RS20070 () | 25916..26491 | + | 576 | WP_075777612.1 | rhodanese-like domain-containing protein | - |
| BMG03_RS20075 () | 26593..27108 | + | 516 | WP_157771628.1 | DoxX family membrane protein | - |
| BMG03_RS20080 () | 27286..27639 | - | 354 | WP_075777614.1 | DsrE family protein | - |
| BMG03_RS20085 () | 27649..28344 | - | 696 | WP_075777615.1 | DUF1499 domain-containing protein | - |
| BMG03_RS20090 () | 28341..29500 | - | 1160 | Protein_33 | IS3 family transposase ISOba2 | Transposase |
| BMG03_RS20095 () | 29618..30136 | - | 519 | Protein_34 | MFS transporter | - |
| BMG03_RS20100 () | 30145..30366 | + | 222 | WP_077701449.1 | rhodanese-like domain-containing protein | - |
| BMG03_RS20105 () | 30405..30617 | - | 213 | WP_075777237.1 | hypothetical protein | - |
| BMG03_RS20110 () | 30614..31332 | - | 719 | Protein_37 | hypothetical protein | - |
| BMG03_RS20115 () | 31414..32319 | + | 906 | WP_075777236.1 | MurR/RpiR family transcriptional regulator | - |
| BMG03_RS20120 () | 32438..33505 | - | 1068 | WP_075777235.1 | hypothetical protein | - |
| BMG03_RS20125 () | 33732..34628 | + | 897 | WP_075777234.1 | Tn3 family transposase ISPsy42 | Transposase |
| BMG03_RS20130 () | 34612..35007 | - | 396 | WP_075777233.1 | PIN domain-containing protein | Toxin Detail |
| BMG03_RS20135 () | 34997..35224 | - | 228 | WP_009815510.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| BMG03_RS20140 () | 35532..36719 | + | 1188 | WP_075777232.1 | Sporulation initiation inhibitor protein Soj | VF |
| BMG03_RS20145 () | 36716..37732 | + | 1017 | WP_075777231.1 | plasmid partitioning protein RepB | - |
| BMG03_RS20150 () | 37910..39145 | + | 1236 | WP_075777230.1 | replication initiation protein RepC | - |
| BMG03_RS20155 () | 39277..40479 | - | 1203 | WP_075777229.1 | Fic family protein | - |
| BMG03_RS20160 () | 40782..41267 | + | 486 | WP_075777228.1 | hypothetical protein | - |
| BMG03_RS20165 () | 41308..42249 | + | 942 | WP_075777227.1 | DUF1738 domain-containing protein | - |
| BMG03_RS20170 () | 42273..42482 | + | 210 | WP_075777226.1 | hypothetical protein | - |
| BMG03_RS20175 () | 42570..42959 | + | 390 | WP_075777225.1 | DUF3768 domain-containing protein | - |
| BMG03_RS20180 () | 43117..45099 | + | 1983 | WP_075777224.1 | ParB/RepB/Spo0J family partition protein | - |
| BMG03_RS20185 () | 45176..45769 | + | 594 | WP_075777223.1 | regulator | - |
| BMG03_RS20190 () | 45872..46525 | + | 654 | WP_075777222.1 | hypothetical protein | - |
| BMG03_RS20195 () | 46650..46976 | + | 327 | WP_075777243.1 | type II toxin-antitoxin system PrlF family antitoxin | Antitoxin Detail |
| BMG03_RS20200 () | 46973..47491 | + | 519 | WP_075777221.1 | type II toxin-antitoxin system YhaV family toxin | Toxin Detail |
| BMG03_RS20205 () | 47639..47791 | + | 153 | WP_075777220.1 | StaA | - |
| BMG03_RS20210 () | 47894..52156 | + | 4263 | WP_075777219.1 | strawberry notch family protein | - |
| BMG03_RS20215 () | 52278..52664 | + | 387 | WP_075777218.1 | hypothetical protein | - |
| BMG03_RS20220 () | 52666..53127 | + | 462 | WP_075777217.1 | hypothetical protein | - |
| BMG03_RS20225 () | 53227..53547 | + | 321 | WP_075777216.1 | hypothetical protein | - |
| BMG03_RS20230 () | 53655..54383 | + | 729 | WP_075777215.1 | DUF736 family protein | - |
| BMG03_RS20235 () | 54667..55074 | + | 408 | WP_075777242.1 | hypothetical protein | - |
| BMG03_RS20240 () | 55205..55804 | + | 600 | WP_099049396.1 | rhomboid family intramembrane serine protease | - |
| BMG03_RS20245 () | 56084..58060 | + | 1977 | WP_075777214.1 | ATP-binding protein | - |
| BMG03_RS20250 () | 58246..59226 | - | 981 | WP_075777213.1 | Abi family protein | - |
| BMG03_RS20255 () | 60087..61016 | + | 930 | WP_075777212.1 | DUF2493 domain-containing protein | - |
| BMG03_RS20260 () | 61552..61758 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| BMG03_RS20265 () | 62322..62915 | + | 594 | WP_075777211.1 | transposase | - |
| BMG03_RS20270 () | 62902..65235 | + | 2334 | WP_075777210.1 | T-DNA border endonuclease VirD2 | Relaxase |
| BMG03_RS20275 () | 65244..67244 | + | 2001 | WP_075777209.1 | Protein VirD4 | VF |
| BMG03_RS20280 () | 67414..68268 | + | 855 | WP_075777208.1 | restriction endonuclease | - |
| BMG03_RS20285 () | 68450..68665 | + | 216 | WP_075777207.1 | helix-turn-helix domain-containing protein | - |
| BMG03_RS20290 () | 68667..69089 | - | 423 | WP_075777206.1 | DUF192 domain-containing protein | - |
| BMG03_RS20295 () | 69170..69934 | + | 765 | Protein_74 | 3-isopropylmalate dehydrogenase | - |
| BMG03_RS20300 () | 69929..70966 | - | 1038 | WP_075777205.1 | hypothetical protein | - |
| BMG03_RS20305 () | 70969..74007 | - | 3039 | WP_075777204.1 | efflux RND transporter permease subunit | - |
| BMG03_RS20310 () | 74004..75074 | - | 1071 | WP_075777203.1 | efflux RND transporter periplasmic adaptor subunit | - |
| BMG03_RS20315 () | 75074..76126 | - | 1053 | WP_157771629.1 | efflux RND transporter periplasmic adaptor subunit | - |
| BMG03_RS20320 () | 76423..77778 | - | 1356 | WP_006473457.1 | IS1380 family transposase IS1247 | Transposase |
| BMG03_RS20325 () | 77866..79524 | + | 1659 | WP_075777201.1 | hypothetical protein | - |
| BMG03_RS20330 () | 79632..82334 | + | 2703 | WP_075777200.1 | AAA family ATPase | - |
| BMG03_RS20335 () | 82461..83537 | - | 1077 | WP_075777199.1 | hypothetical protein | VF |
| BMG03_RS20340 () | 83550..83963 | - | 414 | WP_075777198.1 | hypothetical protein | - |
| BMG03_RS20345 () | 83960..84154 | - | 195 | WP_075777197.1 | hypothetical protein | - |
| BMG03_RS20350 () | 84151..85137 | - | 987 | WP_075777196.1 | Type IV secretion system protein VirB11 | VF |
| BMG03_RS20355 () | 85142..86521 | - | 1380 | WP_075777195.1 | Type IV secretion system protein PtlG | VF |
| BMG03_RS20360 () | 86518..87213 | - | 696 | WP_075777194.1 | Protein virB9 | VF |
| BMG03_RS20365 () | 87216..87872 | - | 657 | WP_075777193.1 | type IV secretion system protein | - |
| BMG03_RS20370 () | 87887..88696 | - | 810 | WP_075777192.1 | conjugal transfer protein TraF | - |
| BMG03_RS20375 () | 88696..89784 | - | 1089 | WP_075777240.1 | lytic transglycosylase domain-containing protein | - |
| BMG03_RS20915 () | 89840..90007 | - | 168 | WP_167733416.1 | hypothetical protein | - |
| BMG03_RS20380 () | 90004..92367 | - | 2364 | WP_075777191.1 | type IV secretion system DNA-binding domain-containing protein | - |
| BMG03_RS20385 () | 92357..92635 | - | 279 | WP_075777190.1 | VirB3 family type IV secretion system protein | - |
| BMG03_RS20390 () | 92628..92921 | - | 294 | WP_012187323.1 | Type IV secretion system protein virB2 | VF |
| BMG03_RS20395 () | 92918..93532 | - | 615 | WP_075777189.1 | lytic transglycosylase domain-containing protein | - |
| BMG03_RS20400 () | 93576..93944 | - | 369 | WP_075777188.1 | hypothetical protein | - |
| BMG03_RS20405 () | 94146..94406 | + | 261 | WP_046212129.1 | hypothetical protein | - |
| BMG03_RS20410 () | 94531..94788 | + | 258 | WP_068241761.1 | helix-turn-helix domain-containing protein | - |
| BMG03_RS20415 () | 94956..95183 | + | 228 | WP_075777187.1 | hypothetical protein | - |
| BMG03_RS20420 () | 95313..96134 | - | 822 | WP_075777186.1 | class I SAM-dependent methyltransferase | - |
| BMG03_RS20425 () | 96321..96833 | - | 513 | WP_075777185.1 | hypothetical protein | - |
| BMG03_RS20430 () | 97151..98005 | - | 855 | WP_075777184.1 | patatin-like phospholipase family protein | - |
| BMG03_RS20435 () | 98523..99488 | - | 966 | Protein_103 | IS481 family transposase ISVei3 | Transposase |
| BMG03_RS20440 () | 99637..101313 | - | 1677 | WP_075777183.1 | putative ABC transporter ATP-binding protein | VF |
| BMG03_RS20445 () | 101301..102944 | - | 1644 | WP_077701452.1 | ATP-binding/permease protein CydD | VF |
| BMG03_RS20450 () | 103269..103920 | - | 652 | Protein_106 | IS6 family transposase | - |
| BMG03_RS20455 () | 104116..105387 | - | 1272 | WP_075777182.1 | FAD-dependent oxidoreductase | - |
| BMG03_RS20460 () | 105411..105803 | - | 393 | WP_075777181.1 | DUF302 domain-containing protein | - |
| BMG03_RS20465 () | 105984..106196 | - | 213 | WP_075777180.1 | hypothetical protein | - |
| BMG03_RS20470 () | 106227..107375 | - | 1149 | WP_075777179.1 | cytochrome d ubiquinol oxidase subunit II | - |
| BMG03_RS20475 () | 107391..108995 | - | 1605 | WP_075777178.1 | cytochrome ubiquinol oxidase subunit I | - |
| BMG03_RS20480 () | 109109..110080 | - | 972 | WP_075777177.1 | IS481 family transposase ISVei3 | Transposase |
| BMG03_RS20485 () | 110156..110362 | - | 207 | WP_075777176.1 | hypothetical protein | - |
| BMG03_RS20490 () | 110427..110798 | - | 372 | WP_075777175.1 | hypothetical protein | - |
| BMG03_RS20495 () | 110992..111420 | + | 429 | WP_075777174.1 | DUF1489 domain-containing protein | - |
| BMG03_RS20500 () | 111417..111737 | - | 321 | WP_075777173.1 | hypothetical protein | - |
| BMG03_RS20505 () | 111980..113335 | - | 1356 | WP_012112698.1 | IS1380 family transposase ISPme1 | Transposase |
| BMG03_RS20510 () | 113573..113929 | - | 357 | WP_077701453.1 | DedA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|