MGE detailed information
MGE type: Genomic_island MGE length: 11204 bp
Accession: NZ_CP019305 Location: 517689..528892 Organism: Lacticaseibacillus rhamnosus strain SCT-10-10-60 Replicon: chromosome
Accession: NZ_CP019305 Location: 517689..528892 Organism: Lacticaseibacillus rhamnosus strain SCT-10-10-60 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWQ99_RS02525 () | 513778..514344 | - | 567 | WP_005691618.1 | TetR/AcrR family transcriptional regulator | - |
| BWQ99_RS02530 () | 514434..514802 | - | 369 | WP_005686376.1 | PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM | - |
| BWQ99_RS02535 () | 514951..515532 | - | 582 | WP_005691622.1 | dihydroxyacetone kinase subunit L | - |
| BWQ99_RS02540 () | 515519..516538 | - | 1020 | WP_019728427.1 | dihydroxyacetone kinase subunit DhaK | - |
| BWQ99_RS02545 () | 516731..517159 | - | 429 | WP_005691626.1 | OsmC family protein | - |
| BWQ99_RS02550 () | 517689..518378 | + | 690 | WP_005691628.1 | rhomboid family intramembrane serine protease | - |
| BWQ99_RS02555 () | 518870..519478 | - | 609 | WP_005691630.1 | hypothetical protein | - |
| BWQ99_RS02565 () | 519925..520800 | + | 876 | WP_025014074.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| BWQ99_RS02570 () | 521043..522458 | - | 1416 | WP_005691634.1 | DNA polymerase III subunit epsilon | - |
| BWQ99_RS02575 () | 522682..522867 | - | 186 | WP_005691636.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| BWQ99_RS02580 () | 522895..523167 | - | 273 | WP_014571130.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BWQ99_RS02585 () | 523729..523977 | + | 249 | WP_005691639.1 | hypothetical protein | - |
| BWQ99_RS02590 () | 524220..524513 | + | 294 | WP_005684269.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| BWQ99_RS02595 () | 524595..525758 | + | 1164 | WP_005691640.1 | MFS transporter | - |
| BWQ99_RS02600 () | 525912..526487 | + | 576 | WP_014571131.1 | DNA-3-methyladenine glycosylase I | - |
| BWQ99_RS02605 () | 526630..527226 | + | 597 | WP_005691643.1 | IS607 family transposase ISCbt3 | Transposase |
| BWQ99_RS02610 () | 527261..528442 | + | 1182 | WP_014571132.1 | transposase | - |
| BWQ99_RS02620 () | 528674..528892 | + | 219 | WP_005691646.1 | hypothetical protein | - |
| BWQ99_RS02625 () | 529152..530567 | + | 1416 | WP_019728464.1 | IS5 family transposase | - |
| BWQ99_RS02630 () | 530602..531483 | - | 882 | WP_005684263.1 | class II fructose-1,6-bisphosphate aldolase | - |
| BWQ99_RS02635 () | 532072..533805 | + | 1734 | WP_005691647.1 | pyruvate oxidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Lactobacillus rhamnosus Lc 705 | Genomic island | TA6139 | NC_013199 | 509097..519119 | 0.003 | |
| Lactobacillus rhamnosus ATCC 8530 | Genomic island | TA6144, TA6239 | NC_017491 | 509273..519295 | 0.003 |