MGE detailed information
MGE type: Conjugative plasmid MGE length: 71430 bp
Accession: NZ_CP019244 Location: 1..71430 Organism: Escherichia coli strain Combat2C1 Replicon: plasmid pCombat2C1-1
Accession: NZ_CP019244 Location: 1..71430 Organism: Escherichia coli strain Combat2C1 Replicon: plasmid pCombat2C1-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWI82_RS26845 () | 1..261 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| BWI82_RS27810 () | 485..547 | + | 63 | Protein_1 | RepA leader peptide Tap | - |
| BWI82_RS26850 () | 551..1408 | + | 858 | WP_032495133.1 | incFII family plasmid replication initiator RepA | - |
| BWI82_RS27815 () | 2108..2266 | + | 159 | WP_072649723.1 | hypothetical protein | - |
| BWI82_RS26860 () | 2321..2590 | + | 270 | WP_021559054.1 | hypothetical protein | Antitoxin Detail |
| BWI82_RS26865 () | 2587..2868 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BWI82_RS27820 () | 2903..2965 | + | 63 | Protein_6 | 3'-5' exonuclease | - |
| BWI82_RS26870 () | 3054..3338 | + | 285 | WP_001407321.1 | ribbon-helix-helix domain-containing protein | - |
| BWI82_RS26875 () | 3338..3615 | + | 278 | Protein_8 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BWI82_RS26880 () | 3711..3968 | + | 258 | WP_001685860.1 | hypothetical protein | - |
| BWI82_RS26885 () | 3970..4677 | + | 708 | WP_058100829.1 | hypothetical protein | - |
| BWI82_RS26890 () | 4681..4971 | + | 291 | WP_148116751.1 | hypothetical protein | - |
| BWI82_RS26895 () | 5008..5712 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| BWI82_RS26905 () | 5814..6293 | + | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| BWI82_RS26910 () | 6363..9515 | - | 3153 | WP_000347934.1 | Efflux pump membrane transporter BepE | VF |
| BWI82_RS26915 () | 9539..10714 | - | 1176 | WP_002914189.1 | Efflux pump periplasmic linker BepF | VF |
| BWI82_RS26920 () | 10939..12207 | + | 1269 | Protein_16 | Tn3 family transposase TnpA_Tn3 | Transposase |
| BWI82_RS26925 () | 12325..12675 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| BWI82_RS26930 () | 12678..13640 | - | 963 | WP_097311424.1 | plasmid segregation protein ParM | - |
| BWI82_RS26935 () | 13779..14081 | + | 303 | WP_148116752.1 | hypothetical protein | - |
| BWI82_RS26945 () | 14158..14841 | + | 684 | WP_000085944.1 | DNA methylase | - |
| BWI82_RS26950 () | 14842..15063 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| BWI82_RS26955 () | 15077..15511 | + | 435 | WP_148116754.1 | DUF1380 family protein | - |
| BWI82_RS26960 () | 15557..16333 | + | 777 | WP_148116755.1 | hypothetical protein | - |
| BWI82_RS26965 () | 16410..17522 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| BWI82_RS26975 () | 18221..18523 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| BWI82_RS26980 () | 18570..18992 | + | 423 | WP_148116756.1 | DUF1380 family protein | - |
| BWI82_RS26985 () | 18989..19180 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| BWI82_RS26990 () | 19159..19753 | - | 595 | Protein_28 | hypothetical protein | - |
| BWI82_RS27000 () | 20219..20449 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| BWI82_RS27005 () | 20501..21862 | + | 1362 | WP_105906676.1 | DUF3560 domain-containing protein | - |
| BWI82_RS27010 () | 21909..22472 | + | 564 | WP_105906675.1 | class I SAM-dependent methyltransferase | - |
| BWI82_RS27020 () | 22624..22878 | + | 255 | WP_072254791.1 | hypothetical protein | - |
| BWI82_RS27825 () | 23119..23325 | + | 207 | WP_000547944.1 | hypothetical protein | - |
| BWI82_RS27040 () | 23351..23884 | + | 534 | WP_105906671.1 | single-stranded DNA-binding protein | - |
| BWI82_RS27045 () | 23942..24175 | + | 234 | WP_000005998.1 | DUF905 family protein | - |
| BWI82_RS27050 () | 24239..26197 | + | 1959 | WP_105272432.1 | ParB/RepB/Spo0J family partition protein | - |
| BWI82_RS27055 () | 26252..26686 | + | 435 | WP_001470779.1 | conjugation system SOS inhibitor PsiB | - |
| BWI82_RS27060 () | 26683..27402 | + | 720 | WP_105906669.1 | plasmid SOS inhibition protein A | - |
| BWI82_RS27610 () | 27414..27602 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 27414..27638 | + | 225 | NuclAT_0 | - | - |
| - () | 27414..27638 | + | 225 | NuclAT_0 | - | - |
| - () | 27414..27638 | + | 225 | NuclAT_0 | - | - |
| - () | 27414..27638 | + | 225 | NuclAT_0 | - | - |
| - () | 27571..27636 | + | 66 | - | - | Antitoxin Detail |
| BWI82_RS27065 () | 27682..27840 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| BWI82_RS27830 () | 28141..28437 | - | 297 | Protein_41 | hypothetical protein | - |
| BWI82_RS27835 () | 28507..28710 | + | 204 | Protein_42 | single-stranded DNA-binding protein | - |
| BWI82_RS27080 () | 28733..29056 | + | 324 | WP_000533253.1 | hypothetical protein | - |
| BWI82_RS27085 () | 29115..29357 | + | 243 | WP_000540591.1 | hypothetical protein | - |
| BWI82_RS27105 () | 30280..30576 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| BWI82_RS27110 () | 30687..31508 | + | 822 | WP_021553189.1 | DUF945 domain-containing protein | - |
| BWI82_RS27115 () | 31804..32313 | - | 510 | WP_089576520.1 | hypothetical protein | VF |
| BWI82_RS27120 () | 32728..33111 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| BWI82_RS27125 () | 33302..33988 | + | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| BWI82_RS27130 () | 34082..34309 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| BWI82_RS27135 () | 34343..34705 | + | 363 | WP_000340273.1 | type IV conjugative transfer system pilin TraA | - |
| BWI82_RS27140 () | 34710..35021 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| BWI82_RS27145 () | 35043..35609 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| BWI82_RS27150 () | 35620..36324 | + | 705 | WP_148718519.1 | type-F conjugative transfer system secretin TraK | - |
| BWI82_RS27155 () | 36324..37751 | + | 1428 | WP_031570446.1 | conjugal transfer protein TraB | - |
| BWI82_RS27160 () | 37741..38325 | + | 585 | WP_148116757.1 | conjugal transfer protein TraP | - |
| BWI82_RS27165 () | 38264..38632 | + | 369 | WP_072035095.1 | conjugal transfer protein TrbD | - |
| BWI82_RS27170 () | 38625..38876 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| BWI82_RS27175 () | 38873..39388 | + | 516 | WP_000809907.1 | type IV conjugative transfer system lipoprotein TraV | - |
| BWI82_RS27180 () | 39523..39744 | + | 222 | WP_148116758.1 | conjugal transfer protein TraR | - |
| BWI82_RS27185 () | 39737..40105 | + | 369 | WP_148116759.1 | hypothetical protein | - |
| BWI82_RS27190 () | 40147..41375 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| BWI82_RS27195 () | 41805..42128 | + | 324 | WP_034169358.1 | hypothetical protein | - |
| BWI82_RS27840 () | 42196..42420 | + | 225 | Protein_64 | hypothetical protein | - |
| BWI82_RS27620 () | 42415..42765 | + | 351 | WP_001712367.1 | hypothetical protein | - |
| BWI82_RS27205 () | 42892..45522 | + | 2631 | WP_105078449.1 | type IV secretion system protein TraC | - |
| BWI82_RS27210 () | 45519..45905 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| BWI82_RS27215 () | 45902..46534 | + | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| BWI82_RS27220 () | 46531..47523 | + | 993 | WP_001523000.1 | conjugal transfer pilus assembly protein TraU | - |
| BWI82_RS27225 () | 47550..47858 | + | 309 | WP_104774097.1 | hypothetical protein | - |
| BWI82_RS27230 () | 47921..48439 | + | 519 | WP_000009088.1 | hypothetical protein | - |
| BWI82_RS27235 () | 48466..49104 | + | 639 | WP_000087539.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| BWI82_RS27240 () | 49101..49472 | + | 372 | WP_000174465.1 | hypothetical protein | - |
| BWI82_RS27245 () | 49497..49919 | + | 423 | WP_001229309.1 | HNH endonuclease | - |
| BWI82_RS27250 () | 49916..51724 | + | 1809 | WP_104774095.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| BWI82_RS27255 () | 51751..52008 | + | 258 | WP_122986581.1 | conjugal transfer protein TrbE | - |
| BWI82_RS27260 () | 52001..52744 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| BWI82_RS27265 () | 52860..53141 | + | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| BWI82_RS27270 () | 53128..53673 | + | 546 | WP_105078375.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| BWI82_RS27275 () | 53603..53965 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| BWI82_RS27280 () | 53965..55338 | + | 1374 | WP_156841533.1 | conjugal transfer protein TraH | - |
| BWI82_RS27285 () | 55335..58154 | + | 2820 | WP_148116760.1 | conjugal transfer mating pair stabilization protein TraG | - |
| BWI82_RS27290 () | 58173..58670 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| BWI82_RS27295 () | 58703..59434 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| BWI82_RS27300 () | 59637..60374 | + | 738 | WP_158666146.1 | hypothetical protein | - |
| BWI82_RS27305 () | 60425..62614 | + | 2190 | WP_024245293.1 | type IV conjugative transfer system coupling protein TraD | - |
| BWI82_RS27310 () | 62614..67884 | + | 5271 | WP_148116762.1 | Multifunctional conjugation protein TraI | Relaxase |
| BWI82_RS27315 () | 67904..68652 | + | 749 | Protein_88 | conjugal transfer pilus acetylase TraX | - |
| BWI82_RS27320 () | 68706..69263 | + | 558 | Protein_89 | fertility inhibition protein FinO | - |
| BWI82_RS27325 () | 69394..69606 | + | 213 | WP_001311693.1 | hypothetical protein | - |
| BWI82_RS27330 () | 69848..70307 | + | 460 | Protein_91 | thermonuclease family protein | - |
| BWI82_RS27335 () | 70353..70562 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| BWI82_RS27340 () | 70601..71191 | + | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|