MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 97268 bp
Accession: NZ_CP019224 Location: 1..97268 Organism: Mycobacterium intracellulare subsp. chimaera strain CDC 2015-22-71 isolate PA-Patient Replicon: plasmid pDHQP20152271_1
Accession: NZ_CP019224 Location: 1..97268 Organism: Mycobacterium intracellulare subsp. chimaera strain CDC 2015-22-71 isolate PA-Patient Replicon: plasmid pDHQP20152271_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWK49_RS29685 () | 1104..1277 | - | 174 | WP_007172699.1 | hypothetical protein | - |
| BWK49_RS28715 () | 1312..1770 | - | 459 | WP_023363543.1 | hypothetical protein | - |
| BWK49_RS28720 () | 2191..2493 | - | 303 | WP_040624393.1 | hypothetical protein | - |
| BWK49_RS28725 () | 2576..3037 | - | 462 | WP_023363541.1 | hypothetical protein | - |
| BWK49_RS28730 () | 3459..4436 | - | 978 | WP_007172422.1 | DUF3560 domain-containing protein | - |
| BWK49_RS28735 () | 4557..4793 | - | 237 | WP_007172423.1 | hypothetical protein | - |
| BWK49_RS28740 () | 5342..5755 | - | 414 | WP_023363536.1 | hypothetical protein | - |
| BWK49_RS28745 () | 5785..6180 | - | 396 | WP_007172420.1 | hypothetical protein | - |
| BWK49_RS28750 () | 6588..7127 | - | 540 | WP_007172419.1 | hypothetical protein | - |
| BWK49_RS29690 () | 7466..7624 | + | 159 | WP_023363534.1 | hypothetical protein | - |
| BWK49_RS28755 () | 7600..8316 | - | 717 | WP_007172417.1 | hypothetical protein | - |
| BWK49_RS29695 () | 8340..8510 | - | 171 | WP_007172416.1 | hypothetical protein | - |
| BWK49_RS28760 () | 8507..9793 | - | 1287 | WP_007172415.1 | hypothetical protein | - |
| BWK49_RS28765 () | 9793..10086 | - | 294 | WP_007172414.1 | hypothetical protein | - |
| BWK49_RS28770 () | 10120..10353 | - | 234 | WP_007172413.1 | glutaredoxin-like protein NrdH | - |
| BWK49_RS28775 () | 11117..12763 | - | 1647 | WP_007172412.1 | ParB/RepB/Spo0J family partition protein | - |
| BWK49_RS28780 () | 13340..13552 | - | 213 | WP_007172410.1 | hypothetical protein | - |
| BWK49_RS28785 () | 13671..14771 | - | 1101 | WP_007172409.1 | tyrosine-type recombinase/integrase | - |
| BWK49_RS28790 () | 14761..15330 | - | 570 | WP_007172408.1 | hypothetical protein | - |
| BWK49_RS28795 () | 16042..17040 | + | 999 | WP_101930848.1 | hypothetical protein | - |
| BWK49_RS28800 () | 17057..17350 | + | 294 | WP_007172406.1 | hypothetical protein | - |
| BWK49_RS28805 () | 17565..17822 | - | 258 | WP_007172405.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| BWK49_RS28810 () | 17819..18103 | - | 285 | WP_007172404.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| BWK49_RS29700 () | 18185..18946 | - | 762 | WP_023363524.1 | hypothetical protein | - |
| BWK49_RS28820 () | 18949..19671 | - | 723 | WP_139315444.1 | ParA family protein | - |
| BWK49_RS28825 () | 20368..21228 | + | 861 | WP_023363522.1 | DUF2637 domain-containing protein | - |
| BWK49_RS28830 () | 21450..22970 | + | 1521 | WP_007172379.1 | DUF4226 domain-containing protein | - |
| BWK49_RS28835 () | 22998..23312 | + | 315 | WP_041321561.1 | hypothetical protein | - |
| BWK49_RS28840 () | 23388..23693 | + | 306 | WP_007172377.1 | hypothetical protein | - |
| BWK49_RS28845 () | 23710..25416 | + | 1707 | WP_023363520.1 | PPE domain-containing protein | - |
| BWK49_RS28850 () | 25413..25754 | + | 342 | WP_007172375.1 | hypothetical protein | - |
| BWK49_RS28855 () | 25867..27054 | - | 1188 | WP_007172374.1 | hypothetical protein | - |
| BWK49_RS28860 () | 27440..27856 | - | 417 | WP_007172373.1 | hypothetical protein | - |
| BWK49_RS28865 () | 28017..29879 | - | 1863 | WP_023363516.1 | helicase associated domain-containing protein | - |
| BWK49_RS28870 () | 30256..30540 | - | 285 | WP_007172369.1 | hypothetical protein | - |
| BWK49_RS29705 () | 30503..31093 | - | 591 | WP_023363514.1 | hypothetical protein | - |
| BWK49_RS28875 () | 31149..31586 | - | 438 | WP_007172368.1 | WhiB family transcriptional regulator | - |
| BWK49_RS28880 () | 31893..32399 | + | 507 | WP_007172367.1 | helix-turn-helix domain-containing protein | - |
| BWK49_RS28885 () | 32505..32756 | + | 252 | WP_040624378.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| BWK49_RS28890 () | 32753..33046 | + | 294 | WP_007172365.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BWK49_RS28895 () | 33264..33971 | + | 708 | WP_139315443.1 | hypothetical protein | - |
| BWK49_RS28900 () | 33985..34683 | + | 699 | WP_139315442.1 | hypothetical protein | - |
| BWK49_RS28905 () | 34798..35877 | + | 1080 | WP_007172361.1 | hypothetical protein | - |
| BWK49_RS29710 () | 35987..36658 | + | 672 | WP_139315441.1 | hypothetical protein | - |
| BWK49_RS29715 () | 36782..37054 | + | 273 | WP_139315440.1 | hypothetical protein | - |
| BWK49_RS29720 () | 37285..37716 | + | 432 | WP_139315439.1 | hypothetical protein | - |
| BWK49_RS28910 () | 39148..40050 | + | 903 | WP_074021534.1 | hypothetical protein | - |
| BWK49_RS28915 () | 40047..40769 | + | 723 | WP_023363510.1 | hypothetical protein | - |
| BWK49_RS28920 () | 40846..40984 | - | 139 | Protein_49 | type II toxin-antitoxin system VapC family toxin | - |
| BWK49_RS28925 () | 41090..42742 | - | 1653 | WP_040624340.1 | IS607 family transposase IS1535 | Transposase |
| BWK49_RS28930 () | 42742..43323 | - | 582 | WP_007172352.1 | IS607 family transposase IS1535 | Transposase |
| BWK49_RS28935 () | 43466..44797 | + | 1332 | WP_023363507.1 | IS256 family transposase IS2606 | Transposase |
| BWK49_RS28940 () | 45079..45495 | - | 417 | WP_040624374.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BWK49_RS28945 () | 45498..45761 | - | 264 | WP_007172349.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| BWK49_RS28950 () | 45974..46837 | + | 864 | WP_142383462.1 | hypothetical protein | - |
| BWK49_RS28955 () | 46901..48004 | + | 1104 | WP_051404593.1 | hypothetical protein | - |
| BWK49_RS28960 () | 48090..49130 | + | 1041 | WP_023363502.1 | Murein DD-endopeptidase MepH | VF |
| BWK49_RS28965 () | 49244..50689 | + | 1446 | WP_101930849.1 | ESX-5 secretion system ATPase EccB5 | VF |
| BWK49_RS28970 () | 50686..54912 | + | 4227 | WP_007172344.1 | ESX-5 secretion system protein EccC5 | VF |
| BWK49_RS28975 () | 55006..55302 | + | 297 | WP_007172343.1 | PE family protein | - |
| BWK49_RS28980 () | 55332..56486 | + | 1155 | WP_007172342.1 | putative PPE family protein PPE51 | VF |
| BWK49_RS28985 () | 56630..56926 | + | 297 | WP_007172341.1 | WXG100 family type VII secretion target | - |
| BWK49_RS28990 () | 56971..57255 | + | 285 | WP_007172340.1 | ESAT-6-like protein EsxN | VF |
| BWK49_RS28995 () | 57334..58254 | + | 921 | WP_007172339.1 | ESX-5 secretion-associated protein EspG5 | VF |
| BWK49_RS29005 () | 59715..61358 | + | 1644 | WP_080674295.1 | ESX-5 secretion system protein EccD5 | VF |
| BWK49_RS29010 () | 61375..63075 | + | 1701 | WP_040624331.1 | Mycosin-5 | VF |
| BWK49_RS29015 () | 63075..64667 | + | 1593 | WP_007172335.1 | ESX-5 secretion system protein EccE5 | VF |
| BWK49_RS29020 () | 64690..66522 | + | 1833 | WP_007172334.1 | ESX-5 secretion system protein EccA5 | VF |
| BWK49_RS29025 () | 66530..66856 | + | 327 | WP_007172333.1 | hypothetical protein | - |
| BWK49_RS29725 () | 67008..67151 | + | 144 | WP_154074434.1 | hypothetical protein | - |
| BWK49_RS29035 () | 67185..69254 | - | 2070 | WP_007172331.1 | hypothetical protein | - |
| BWK49_RS29040 () | 69251..70672 | - | 1422 | WP_087588785.1 | ATP-binding protein | - |
| BWK49_RS29045 () | 70755..71927 | - | 1173 | WP_080691094.1 | DDE-type integrase/transposase/recombinase | - |
| BWK49_RS29050 () | 71849..72139 | - | 291 | WP_042910035.1 | helix-turn-helix domain-containing protein | - |
| BWK49_RS29055 () | 72271..73812 | - | 1542 | Protein_75 | hypothetical protein | - |
| BWK49_RS29060 () | 73886..74170 | - | 285 | WP_007172329.1 | hypothetical protein | - |
| BWK49_RS29730 () | 74191..74439 | - | 249 | WP_007172328.1 | hypothetical protein | - |
| BWK49_RS29065 () | 74465..74692 | - | 228 | WP_007172327.1 | hypothetical protein | - |
| BWK49_RS29070 () | 74706..75632 | - | 927 | WP_007172326.1 | conjugal transfer protein | - |
| BWK49_RS29075 () | 75649..76863 | - | 1215 | WP_007172325.1 | hypothetical protein | - |
| BWK49_RS29080 () | 76860..77165 | - | 306 | WP_007172324.1 | hypothetical protein | - |
| BWK49_RS29085 () | 77264..77698 | + | 435 | WP_007172323.1 | hypothetical protein | - |
| BWK49_RS29090 () | 77682..78347 | + | 666 | WP_040624365.1 | hypothetical protein | - |
| BWK49_RS29095 () | 78350..79753 | + | 1404 | WP_007172321.1 | type IV secretory system conjugative DNA transfer family protein | - |
| BWK49_RS29100 () | 79750..80016 | + | 267 | WP_007172320.1 | hypothetical protein | - |
| BWK49_RS29105 () | 80362..81450 | + | 1089 | WP_074021350.1 | HD domain-containing protein | - |
| BWK49_RS29110 () | 81597..82013 | + | 417 | WP_139315438.1 | type IV secretion system protein VirD4 | - |
| BWK49_RS29735 () | 82006..82155 | + | 150 | WP_007172316.1 | hypothetical protein | - |
| BWK49_RS29115 () | 82235..82801 | + | 567 | WP_007172315.1 | hypothetical protein | - |
| BWK49_RS29130 () | 83624..84145 | + | 522 | WP_007172312.1 | hypothetical protein | - |
| BWK49_RS29135 () | 84213..84800 | + | 588 | WP_007172311.1 | hypothetical protein | - |
| BWK49_RS29740 () | 84797..86164 | + | 1368 | WP_023363493.1 | hypothetical protein | - |
| BWK49_RS29155 () | 86205..86477 | - | 273 | WP_040624325.1 | hypothetical protein | - |
| BWK49_RS29160 () | 86582..92440 | - | 5859 | WP_007172307.1 | Multifunctional conjugation protein TraI | Relaxase |
| BWK49_RS29165 () | 92695..93174 | + | 480 | WP_007172306.1 | hypothetical protein | - |
| BWK49_RS29170 () | 93263..93787 | + | 525 | WP_007172305.1 | hypothetical protein | - |
| BWK49_RS29175 () | 94144..95190 | - | 1047 | WP_007172304.1 | DUF945 domain-containing protein | - |
| BWK49_RS29180 () | 95608..96144 | - | 537 | WP_007172303.1 | hypothetical protein | - |
| BWK49_RS29185 () | 96241..96585 | - | 345 | WP_007172302.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|