MGE detailed information
MGE type: Conjugative plasmid MGE length: 128248 bp
Accession: NZ_CP019007 Location: 1..128248 Organism: Escherichia coli strain Ecol_AZ159 Replicon: plasmid pECAZ159_1
Accession: NZ_CP019007 Location: 1..128248 Organism: Escherichia coli strain Ecol_AZ159 Replicon: plasmid pECAZ159_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE939_RS00330 () | 124..426 | + | 303 | WP_072256028.1 | antirestriction protein | - |
| BE939_RS00335 () | 426..887 | + | 462 | WP_042007484.1 | DUF1380 family protein | - |
| BE939_RS00340 () | 887..1069 | + | 183 | WP_078232960.1 | hypothetical protein | - |
| BE939_RS26660 () | 1057..1385 | - | 329 | Protein_3 | pilus assembly protein | - |
| BE939_RS00360 () | 2063..2293 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| BE939_RS00365 () | 2345..3706 | + | 1362 | WP_000170681.1 | DUF3560 domain-containing protein | - |
| BE939_RS00370 () | 3752..4291 | + | 540 | WP_078232961.1 | class I SAM-dependent methyltransferase | - |
| BE939_RS26665 () | 4463..4735 | + | 273 | WP_072133095.1 | hypothetical protein | - |
| BE939_RS00395 () | 5208..5735 | + | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| BE939_RS00400 () | 5791..6024 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| BE939_RS00405 () | 6083..8041 | + | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| BE939_RS00410 () | 8096..8530 | + | 435 | WP_000845895.1 | conjugation system SOS inhibitor PsiB | - |
| BE939_RS00415 () | 8527..9246 | + | 720 | WP_001276228.1 | plasmid SOS inhibition protein A | - |
| BE939_RS26265 () | 9258..9446 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 9258..9482 | + | 225 | NuclAT_0 | - | - |
| - () | 9258..9482 | + | 225 | NuclAT_0 | - | - |
| - () | 9258..9482 | + | 225 | NuclAT_0 | - | - |
| - () | 9258..9482 | + | 225 | NuclAT_0 | - | - |
| BE939_RS00420 () | 9526..9684 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| BE939_RS26670 () | 10375..10581 | + | 207 | WP_000547939.1 | hypothetical protein | - |
| BE939_RS00445 () | 10606..10893 | + | 288 | WP_078232962.1 | hypothetical protein | - |
| BE939_RS00450 () | 11014..11835 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| BE939_RS00455 () | 12132..12734 | - | 603 | WP_000243709.1 | hypothetical protein | VF |
| BE939_RS00460 () | 13055..13438 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| BE939_RS00465 () | 13625..14314 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| BE939_RS00470 () | 14413..14808 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| BE939_RS00475 () | 14841..15206 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| BE939_RS00480 () | 15221..15532 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| BE939_RS00485 () | 15554..16120 | + | 567 | WP_000399785.1 | type IV conjugative transfer system protein TraE | - |
| BE939_RS00490 () | 16131..16835 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| BE939_RS00495 () | 16835..18262 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| BE939_RS00500 () | 18252..18842 | + | 591 | WP_000002792.1 | conjugal transfer protein TraP | - |
| BE939_RS00505 () | 18796..19026 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| BE939_RS00510 () | 19038..19289 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| BE939_RS00515 () | 19286..19801 | + | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| BE939_RS00520 () | 19936..20157 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| BE939_RS00525 () | 20317..22944 | + | 2628 | WP_078232963.1 | type IV secretion system protein TraC | - |
| BE939_RS00530 () | 22941..23327 | + | 387 | WP_000097319.1 | type-F conjugative transfer system protein TrbI | - |
| BE939_RS00535 () | 23324..23956 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| BE939_RS00540 () | 23953..24945 | + | 993 | WP_000830187.1 | conjugal transfer pilus assembly protein TraU | - |
| BE939_RS00545 () | 24954..25592 | + | 639 | WP_000777688.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| BE939_RS00550 () | 25589..27397 | + | 1809 | WP_000821847.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| BE939_RS00555 () | 27424..27681 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| BE939_RS00560 () | 27674..28417 | + | 744 | WP_001030367.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| BE939_RS00565 () | 28433..28780 | + | 348 | WP_001287913.1 | conjugal transfer protein TrbA | - |
| BE939_RS00570 () | 28782..29096 | - | 315 | WP_000415567.1 | hypothetical protein | - |
| BE939_RS00575 () | 29177..29461 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| BE939_RS00580 () | 29448..29993 | + | 546 | WP_000059850.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| BE939_RS00585 () | 29923..30264 | + | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| BE939_RS00590 () | 30218..30632 | + | 415 | Protein_45 | F-type conjugal transfer protein TrbF | - |
| BE939_RS00595 () | 30632..32005 | + | 1374 | WP_021553026.1 | conjugal transfer protein TraH | - |
| BE939_RS00600 () | 32002..34818 | + | 2817 | WP_001007054.1 | conjugal transfer mating pair stabilization protein TraG | - |
| BE939_RS00605 () | 34851..35372 | + | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
| BE939_RS00610 () | 35397..36128 | + | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| BE939_RS00615 () | 36381..38534 | + | 2154 | WP_000009350.1 | type IV conjugative transfer system coupling protein TraD | - |
| BE939_RS00620 () | 38543..38941 | - | 399 | WP_000911324.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| BE939_RS00625 () | 38941..39168 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| BE939_RS00630 () | 39250..44520 | + | 5271 | WP_011117356.1 | Multifunctional conjugation protein TraI | Relaxase |
| BE939_RS00635 () | 44540..45286 | + | 747 | WP_000205777.1 | conjugal transfer pilus acetylase TraX | - |
| BE939_RS00640 () | 45341..45901 | + | 561 | WP_000139359.1 | fertility inhibition protein FinO | - |
| BE939_RS00645 () | 46039..46251 | + | 213 | WP_012311405.1 | hypothetical protein | - |
| BE939_RS00650 () | 46494..46955 | + | 462 | WP_001233871.1 | thermonuclease family protein | - |
| BE939_RS00655 () | 47001..47210 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| BE939_RS00660 () | 47248..47821 | + | 574 | Protein_59 | DUF2726 domain-containing protein | - |
| BE939_RS00665 () | 48060..48320 | + | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| BE939_RS00675 () | 48546..48620 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| BE939_RS00680 () | 48613..49470 | + | 858 | WP_031942351.1 | incFII family plasmid replication initiator RepA | - |
| BE939_RS00695 () | 50386..50655 | + | 270 | WP_000079942.1 | hypothetical protein | Antitoxin Detail |
| BE939_RS00700 () | 50652..50933 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BE939_RS00705 () | 50979..51191 | + | 213 | Protein_65 | 3'-5' exonuclease | - |
| BE939_RS00710 () | 51450..52379 | - | 930 | WP_000102288.1 | hypothetical protein | - |
| BE939_RS00715 () | 52918..54495 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| BE939_RS00720 () | 54805..55365 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| BE939_RS00725 () | 55369..58335 | + | 2967 | WP_078232964.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| BE939_RS00735 () | 58461..59648 | - | 1188 | WP_001697863.1 | IS91 family transposase ISEc37 | Transposase |
| BE939_RS00740 () | 59648..60013 | - | 366 | WP_000124134.1 | hypothetical protein | - |
| BE939_RS00745 () | 60161..61453 | - | 1293 | Protein_72 | ISL3 family transposase ISEc38 | Transposase |
| BE939_RS00750 () | 61463..61939 | - | 477 | Protein_73 | IS256 family transposase IS1414 | Transposase |
| BE939_RS00755 () | 61996..64677 | - | 2682 | WP_000678689.1 | hypothetical protein | - |
| BE939_RS00760 () | 65213..65563 | + | 351 | WP_000493379.1 | hypothetical protein | - |
| BE939_RS00765 () | 65607..66296 | + | 690 | WP_000796228.1 | hypothetical protein | - |
| BE939_RS00770 () | 66293..67084 | + | 792 | WP_000016493.1 | site-specific integrase | - |
| BE939_RS00775 () | 67261..67614 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| BE939_RS00780 () | 67664..68479 | - | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| BE939_RS00790 () | 68723..69250 | + | 528 | WP_000203272.1 | colicin B immunity protein | - |
| BE939_RS00795 () | 69268..69435 | - | 168 | Protein_81 | colicin-B | - |
| BE939_RS00805 () | 69608..69889 | + | 282 | WP_001105066.1 | hypothetical protein | - |
| BE939_RS26270 () | 70353..70589 | + | 237 | WP_014640552.1 | colicin V immunity protein | - |
| BE939_RS00820 () | 70567..70878 | + | 312 | WP_001259758.1 | colicin V | - |
| BE939_RS00825 () | 71048..73162 | - | 2115 | WP_109045958.1 | peptidase domain-containing ABC transporter | - |
| BE939_RS00830 () | 73137..74411 | - | 1275 | WP_000489607.1 | HlyD family secretion protein | - |
| BE939_RS00835 () | 74608..75844 | - | 1237 | Protein_87 | IS3 family transposase IS2 | Transposase |
| BE939_RS00845 () | 76366..76635 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| BE939_RS00850 () | 76632..76913 | + | 282 | WP_000969990.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BE939_RS00855 () | 76959..77807 | + | 849 | WP_001058005.1 | 3'-5' exonuclease | - |
| BE939_RS00860 () | 77924..78406 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| BE939_RS00870 () | 78708..79055 | + | 348 | WP_000142437.1 | hypothetical protein | - |
| BE939_RS00880 () | 79614..80648 | + | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| BE939_RS00900 () | 81503..83680 | + | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| BE939_RS00905 () | 83725..84681 | - | 957 | WP_000271276.1 | Ferri-bacillibactin esterase BesA | VF |
| BE939_RS00910 () | 84766..85995 | - | 1230 | WP_000933675.1 | Enterochelin esterase | VF |
| BE939_RS00915 () | 86099..89758 | - | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
| BE939_RS00920 () | 89898..91013 | - | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| BE939_RS00930 () | 92249..93349 | - | 1101 | Protein_99 | IS481 family transposase ISKpn28 | Transposase |
| BE939_RS00940 () | 93903..94102 | + | 200 | Protein_100 | lysis protein | - |
| BE939_RS00945 () | 94160..94453 | - | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| BE939_RS00955 () | 95080..96316 | + | 1237 | Protein_102 | IS3 family transposase IS2 | Transposase |
| BE939_RS00970 () | 97539..98732 | + | 1194 | WP_000450494.1 | GTP-binding protein | - |
| BE939_RS26275 () | 98910..99059 | + | 150 | Protein_104 | IS3 family transposase IS2 | Transposase |
| BE939_RS00980 () | 99369..100758 | + | 1390 | Protein_105 | ISNCY family transposase ISKpn21 | Transposase |
| BE939_RS00985 () | 100836..101533 | - | 698 | Protein_106 | IS1 family transposase | - |
| BE939_RS00995 () | 101590..101858 | + | 269 | Protein_107 | IS3 family transposase ISLad1 | Transposase |
| BE939_RS01005 () | 103403..103561 | + | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| BE939_RS01020 () | 104834..105787 | + | 954 | WP_000280980.1 | Protease 7 | VF |
| BE939_RS01030 () | 106219..107328 | + | 1110 | WP_001696610.1 | SDR family oxidoreductase | - |
| BE939_RS01035 () | 107397..108299 | + | 903 | WP_171846920.1 | hypothetical protein | VF |
| BE939_RS01040 () | 108673..108861 | + | 189 | WP_032145890.1 | hypothetical protein | - |
| BE939_RS01045 () | 108982..109722 | + | 741 | WP_001603634.1 | tyrosine-type recombinase/integrase | - |
| BE939_RS01050 () | 110008..110985 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| BE939_RS01060 () | 111729..112052 | + | 324 | Protein_116 | IS21 family transposase IS21 | Transposase |
| BE939_RS26675 () | 112054..112158 | + | 105 | Protein_117 | AAA family ATPase | - |
| BE939_RS01065 () | 112219..112732 | + | 514 | Protein_118 | DUF4113 domain-containing protein | - |
| BE939_RS01070 () | 112912..113609 | - | 698 | Protein_119 | IS1 family transposase | - |
| BE939_RS01080 () | 113664..113822 | - | 159 | Protein_120 | fluoride efflux transporter CrcB | - |
| BE939_RS01090 () | 114163..114576 | - | 414 | Protein_121 | phosphopyruvate hydratase | - |
| BE939_RS01095 () | 114574..114831 | + | 258 | Protein_122 | Tn3 family transposase | - |
| BE939_RS01100 () | 115065..115922 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| BE939_RS01105 () | 115919..116776 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| BE939_RS01110 () | 116773..117600 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| BE939_RS01115 () | 117600..118514 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| BE939_RS01130 () | 118871..119568 | + | 698 | Protein_127 | IS1 family transposase | - |
| BE939_RS01135 () | 119797..121299 | + | 1503 | WP_001610277.1 | hypothetical protein | - |
| BE939_RS01140 () | 121634..122331 | + | 698 | Protein_129 | IS1 family transposase | - |
| BE939_RS01145 () | 122631..123797 | + | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| BE939_RS01150 () | 123797..124768 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| BE939_RS26680 () | 125408..125746 | + | 339 | WP_001513511.1 | hypothetical protein | - |
| BE939_RS01170 () | 125815..126390 | + | 576 | WP_000343071.1 | hypothetical protein | - |
| BE939_RS01175 () | 126403..126615 | + | 213 | WP_000092896.1 | hypothetical protein | - |
| BE939_RS01180 () | 126876..127847 | - | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|