MGE detailed information
MGE type: Conjugative plasmid MGE length: 87114 bp
Accession: NZ_CP018946 Location: 1..87114 Organism: Escherichia coli strain Ecol_224 Replicon: plasmid pEC224_2
Accession: NZ_CP018946 Location: 1..87114 Organism: Escherichia coli strain Ecol_224 Replicon: plasmid pEC224_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE957_RS00645 () | 1..153 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - () | 205..265 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 205..265 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 205..265 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 205..265 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| BE957_RS00650 () | 468..1559 | + | 1092 | WP_031942446.1 | hypothetical protein | - |
| - () | 1629..1686 | + | 58 | NuclAT_1 | - | - |
| - () | 1629..1686 | + | 58 | NuclAT_1 | - | - |
| - () | 1629..1686 | + | 58 | NuclAT_1 | - | - |
| - () | 1629..1686 | + | 58 | NuclAT_1 | - | - |
| BE957_RS00655 () | 1866..3074 | + | 1209 | WP_001611760.1 | IncI1-type conjugal transfer protein TrbA | - |
| BE957_RS00660 () | 3093..4163 | + | 1071 | WP_078207108.1 | IncI1-type conjugal transfer protein TrbB | - |
| BE957_RS00665 () | 4156..6447 | + | 2292 | WP_021497839.1 | hypothetical protein | - |
| BE957_RS00670 () | 6484..9183 | - | 2700 | WP_012783930.1 | Protein TraI | Relaxase |
| BE957_RS00675 () | 9194..9526 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| BE957_RS00680 () | 9760..10095 | + | 336 | WP_000157082.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| BE957_RS00685 () | 10181..11029 | - | 849 | WP_012783929.1 | DUF4942 domain-containing protein | - |
| BE957_RS00700 () | 11610..11861 | + | 252 | WP_063117899.1 | hypothetical protein | - |
| BE957_RS00705 () | 11892..12815 | - | 924 | WP_063117900.1 | Recombination-promoting nuclease RpnD | VF |
| BE957_RS00710 () | 12812..13201 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| BE957_RS00715 () | 13378..13644 | - | 267 | WP_000804663.1 | hypothetical protein | - |
| BE957_RS00720 () | 13736..14170 | - | 435 | WP_000218857.1 | hypothetical protein | - |
| BE957_RS00730 () | 14899..15399 | - | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| BE957_RS00740 () | 15861..16457 | - | 597 | WP_000977995.1 | hypothetical protein | - |
| BE957_RS00745 () | 16454..17173 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| BE957_RS00750 () | 17170..17604 | - | 435 | WP_078207120.1 | conjugation system SOS inhibitor PsiB | - |
| BE957_RS00755 () | 17657..19615 | - | 1959 | WP_078207109.1 | ParB/RepB/Spo0J family partition protein | - |
| BE957_RS00760 () | 19674..19907 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| BE957_RS00765 () | 19965..20450 | - | 486 | WP_031222835.1 | single-stranded DNA-binding protein | - |
| BE957_RS00770 () | 20600..22501 | - | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| BE957_RS27785 () | 23537..23770 | - | 234 | WP_139288298.1 | hypothetical protein | - |
| BE957_RS00790 () | 23923..24114 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| BE957_RS00795 () | 24111..24533 | - | 423 | WP_078207110.1 | DUF1380 family protein | - |
| BE957_RS00800 () | 24580..24882 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| BE957_RS00810 () | 25421..26191 | - | 771 | WP_077132299.1 | hypothetical protein | - |
| BE957_RS00815 () | 26236..26670 | - | 435 | WP_000274484.1 | DUF1380 family protein | - |
| BE957_RS00820 () | 26684..26905 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| BE957_RS00825 () | 26906..27589 | - | 684 | WP_000086127.1 | DNA methylase | - |
| BE957_RS00830 () | 27665..27976 | - | 312 | WP_033863049.1 | hypothetical protein | - |
| BE957_RS00835 () | 27980..28402 | - | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| BE957_RS00840 () | 28405..29385 | - | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| BE957_RS00845 () | 29723..30058 | + | 336 | WP_001340323.1 | hypothetical protein | - |
| BE957_RS00850 () | 30153..31055 | - | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| BE957_RS00860 () | 31473..31721 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| BE957_RS00865 () | 31718..32155 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| BE957_RS00870 () | 32155..33426 | + | 1272 | WP_032291125.1 | Y-family DNA polymerase | - |
| BE957_RS00875 () | 33614..34240 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| BE957_RS28225 () | 34237..34539 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| BE957_RS00890 () | 35090..36436 | - | 1347 | WP_001132021.1 | hypothetical protein | - |
| BE957_RS00900 () | 36789..37391 | + | 603 | WP_078207111.1 | proQ/FINO family protein | - |
| BE957_RS00905 () | 37447..37956 | + | 510 | WP_032291091.1 | hypothetical protein | - |
| BE957_RS00910 () | 38272..39120 | - | 849 | WP_032291092.1 | 3'-5' exonuclease | - |
| BE957_RS00915 () | 39160..39441 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BE957_RS00920 () | 39438..39707 | - | 270 | WP_032291093.1 | hypothetical protein | Antitoxin Detail |
| BE957_RS28230 () | 39762..39920 | - | 159 | WP_038349023.1 | hypothetical protein | - |
| BE957_RS00940 () | 40618..41649 | - | 1032 | WP_052991836.1 | replication initiation protein | - |
| BE957_RS00955 () | 42622..42885 | + | 264 | WP_001387472.1 | ash family protein | - |
| BE957_RS00960 () | 42803..43090 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| BE957_RS00970 () | 43532..44065 | + | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| BE957_RS00980 () | 44319..45002 | + | 684 | WP_001377964.1 | hypothetical protein | - |
| BE957_RS00985 () | 45174..45428 | + | 255 | WP_001492938.1 | PilI type IV pilus biogenesis protein | - |
| BE957_RS28235 () | 45425..45685 | + | 261 | WP_000994493.1 | hypothetical protein | - |
| BE957_RS00995 () | 45689..45955 | + | 267 | WP_023143690.1 | hypothetical protein | - |
| BE957_RS01005 () | 46632..47699 | + | 1068 | WP_032321486.1 | hypothetical protein | VF |
| BE957_RS01010 () | 47699..48136 | + | 438 | WP_000539811.1 | hypothetical protein | VF |
| BE957_RS01015 () | 48150..49832 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| BE957_RS01020 () | 49825..51120 | + | 1296 | WP_078207113.1 | type 4b pilus protein PilO2 | - |
| BE957_RS01025 () | 51107..51559 | + | 453 | WP_001247337.1 | hypothetical protein | VF |
| BE957_RS01030 () | 51570..53123 | + | 1554 | WP_063118132.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| BE957_RS01035 () | 53136..54221 | + | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| BE957_RS01040 () | 54238..54852 | + | 615 | WP_000908226.1 | hypothetical protein | VF |
| BE957_RS01045 () | 54862..55422 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| BE957_RS01050 () | 55407..56063 | + | 657 | WP_001193549.1 | hypothetical protein | VF |
| BE957_RS01055 () | 56063..57355 | + | 1293 | WP_001619585.1 | hypothetical protein | VF |
| BE957_RS01080 () | 58768..59121 | - | 354 | WP_078207114.1 | shufflon protein D' | - |
| BE957_RS01085 () | 59120..60274 | + | 1155 | WP_001139955.1 | integrase | - |
| BE957_RS01090 () | 60425..61249 | + | 825 | WP_023518851.1 | hypothetical protein | - |
| BE957_RS01095 () | 61335..62537 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| BE957_RS01100 () | 62597..63181 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| BE957_RS01105 () | 63576..64034 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| BE957_RS01110 () | 64031..64849 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| BE957_RS01115 () | 64846..65994 | + | 1149 | WP_078207115.1 | putative protein YggR | VF |
| BE957_RS01120 () | 65991..66281 | + | 291 | WP_001314267.1 | hypothetical protein | - |
| BE957_RS01125 () | 66296..66847 | + | 552 | WP_000014586.1 | Phospholipase D | VF |
| BE957_RS01130 () | 66937..70701 | + | 3765 | WP_078207116.1 | DNA primase | - |
| BE957_RS01135 () | 70719..71066 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| BE957_RS01140 () | 71063..71755 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| BE957_RS01145 () | 71766..72749 | + | 984 | WP_001191880.1 | hypothetical protein | VF |
| BE957_RS01150 () | 72752..74041 | + | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| BE957_RS01155 () | 74041..74745 | + | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| BE957_RS01160 () | 74745..75272 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| BE957_RS01165 () | 75323..75727 | + | 405 | WP_078207117.1 | IncI1-type conjugal transfer protein TraR | - |
| BE957_RS01170 () | 75791..75979 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| BE957_RS01175 () | 75963..76763 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| BE957_RS01180 () | 76853..79897 | + | 3045 | WP_078207118.1 | IncI1-type conjugal transfer protein TraU | - |
| BE957_RS01185 () | 79897..80511 | + | 615 | WP_078207119.1 | IncI1-type conjugal transfer protein TraV | - |
| BE957_RS01190 () | 80478..81680 | + | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| BE957_RS01195 () | 81709..82293 | + | 585 | WP_001476649.1 | IncI1-type conjugal transfer protein TraX | - |
| BE957_RS01200 () | 82390..84558 | + | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| BE957_RS01205 () | 84632..85282 | + | 651 | WP_021520375.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| BE957_RS01210 () | 85354..85563 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| BE957_RS28240 () | 85955..86131 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| BE957_RS01215 () | 86196..86492 | - | 297 | WP_011264046.1 | hypothetical protein | - |
| BE957_RS01220 () | 86792..87043 | + | 252 | WP_001291964.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|