MGE detailed information
MGE type: Genomic_island MGE length: 27916 bp
Accession: NZ_CP018858 Location: 784895..812810 Organism: Xanthomonas citri pv. citri strain LH201 Replicon: chromosome
Accession: NZ_CP018858 Location: 784895..812810 Organism: Xanthomonas citri pv. citri strain LH201 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJD09_RS03455 () | 780688..782346 | + | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| BJD09_RS03460 () | 782358..782867 | + | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| BJD09_RS03465 () | 782910..784016 | - | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| BJD09_RS26095 () | 784299..784475 | - | 177 | WP_003485979.1 | hypothetical protein | - |
| BJD09_RS03470 () | 784895..787012 | - | 2118 | WP_015463321.1 | ATP-binding protein | - |
| BJD09_RS03475 () | 787009..788403 | - | 1395 | WP_011051590.1 | SIR2 family protein | - |
| BJD09_RS03480 () | 788982..789215 | - | 234 | WP_040107635.1 | hypothetical protein | - |
| BJD09_RS03485 () | 789448..790449 | + | 1002 | WP_011051588.1 | replication protein | - |
| BJD09_RS03490 () | 790848..791108 | - | 261 | WP_015463320.1 | hypothetical protein | - |
| BJD09_RS03495 () | 791669..791869 | + | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| BJD09_RS25040 () | 791844..792238 | + | 395 | Protein_651 | relaxase | - |
| BJD09_RS03500 () | 792261..792671 | - | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| BJD09_RS03505 () | 792775..793104 | - | 330 | WP_015463316.1 | hypothetical protein | - |
| BJD09_RS03510 () | 793113..794030 | - | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| BJD09_RS03515 () | 794027..795613 | - | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| BJD09_RS03520 () | 795610..795798 | - | 189 | WP_011051582.1 | hypothetical protein | - |
| BJD09_RS03525 () | 795849..797957 | - | 2109 | WP_040155655.1 | AAA family ATPase | - |
| BJD09_RS03530 () | 798147..799085 | - | 939 | WP_043930788.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| BJD09_RS03535 () | 799721..800946 | - | 1226 | Protein_659 | IS3 family transposase ISJsp1 | Transposase |
| BJD09_RS03545 () | 800995..802263 | + | 1269 | Protein_660 | Tn3 family transposase ISPsy42 | Transposase |
| BJD09_RS03550 () | 802433..802711 | + | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| BJD09_RS03555 () | 802699..802989 | + | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BJD09_RS03560 () | 802986..803306 | + | 321 | WP_099522003.1 | hypothetical protein | - |
| BJD09_RS03565 () | 803577..803756 | + | 180 | WP_015463309.1 | hypothetical protein | - |
| BJD09_RS03575 () | 803968..805055 | + | 1088 | Protein_665 | IS3 family transposase ISXcd1 | Transposase |
| BJD09_RS03580 () | 805095..806228 | + | 1134 | Protein_666 | IS5 family transposase ISXo4 | Transposase |
| BJD09_RS25045 () | 806520..806713 | + | 194 | Protein_667 | hypothetical protein | - |
| BJD09_RS03585 () | 806820..807188 | - | 369 | WP_015472110.1 | hypothetical protein | - |
| BJD09_RS03590 () | 808116..808637 | - | 522 | WP_011051570.1 | hypothetical protein | - |
| BJD09_RS03595 () | 808647..810818 | - | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| BJD09_RS03605 () | 811719..812810 | - | 1092 | WP_015463304.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| BJD09_RS03615 () | 813099..813500 | - | 402 | WP_003485983.1 | H-NS histone family protein | - |
| BJD09_RS03620 () | 813720..813896 | + | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| BJD09_RS03625 () | 813912..816530 | + | 2619 | WP_011051566.1 | DNA ligase D | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0.003 |