MGE detailed information
MGE type: Genomic_island MGE length: 26521 bp
Accession: NZ_CP018854 Location: 3154688..3181208 Organism: Xanthomonas citri pv. citri strain LH276 Replicon: chromosome
Accession: NZ_CP018854 Location: 3154688..3181208 Organism: Xanthomonas citri pv. citri strain LH276 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BI316_RS14350 () | 3151610..3151786 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| BI316_RS14355 () | 3152006..3152407 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| BI316_RS14365 () | 3152696..3153787 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| BI316_RS14375 () | 3154688..3156859 | + | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| BI316_RS14380 () | 3156869..3157390 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| BI316_RS26460 () | 3158255..3159211 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| BI316_RS14390 () | 3159278..3160411 | - | 1134 | Protein_2661 | IS5 family transposase ISXo4 | Transposase |
| BI316_RS14395 () | 3160451..3161538 | - | 1088 | Protein_2662 | IS3 family transposase ISXcd1 | Transposase |
| BI316_RS14405 () | 3161751..3161930 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| BI316_RS14410 () | 3162201..3162521 | - | 321 | WP_099522003.1 | hypothetical protein | - |
| BI316_RS14415 () | 3162518..3162808 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BI316_RS14420 () | 3162796..3163074 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| BI316_RS14425 () | 3163244..3164512 | - | 1269 | Protein_2667 | Tn3 family transposase ISPsy42 | Transposase |
| BI316_RS14435 () | 3164561..3165786 | + | 1226 | Protein_2668 | IS3 family transposase ISJsp1 | Transposase |
| BI316_RS14440 () | 3166422..3167360 | + | 939 | WP_043930788.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| BI316_RS14445 () | 3167550..3169658 | + | 2109 | WP_040155655.1 | AAA family ATPase | - |
| BI316_RS14450 () | 3169709..3169897 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| BI316_RS14455 () | 3169894..3171480 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| BI316_RS14460 () | 3171477..3172394 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| BI316_RS14465 () | 3172403..3172732 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| BI316_RS14470 () | 3172836..3173246 | + | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| BI316_RS25255 () | 3173269..3173663 | - | 395 | Protein_2676 | relaxase | - |
| BI316_RS14475 () | 3173638..3173838 | - | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| BI316_RS14480 () | 3174399..3174659 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| BI316_RS14485 () | 3175058..3176059 | - | 1002 | WP_011051588.1 | replication protein | - |
| BI316_RS14490 () | 3176292..3176525 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| BI316_RS14495 () | 3177104..3178498 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| BI316_RS14500 () | 3178495..3180612 | + | 2118 | WP_015463321.1 | ATP-binding protein | - |
| BI316_RS26310 () | 3181032..3181208 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| BI316_RS14505 () | 3181491..3182597 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| BI316_RS14510 () | 3182640..3183149 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| BI316_RS14515 () | 3183161..3184819 | - | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| BI316_RS14520 () | 3185130..3185735 | + | 606 | WP_170914521.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0 |