MGE detailed information
MGE type: Genomic_island MGE length: 27917 bp
Accession: NZ_CP018847 Location: 2645661..2673577 Organism: Xanthomonas citri pv. citri strain LL074-4 Replicon: chromosome
Accession: NZ_CP018847 Location: 2645661..2673577 Organism: Xanthomonas citri pv. citri strain LL074-4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BI314_RS11780 () | 2641454..2643112 | + | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| BI314_RS11785 () | 2643124..2643633 | + | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| BI314_RS11790 () | 2643676..2644782 | - | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| BI314_RS26235 () | 2645065..2645241 | - | 177 | WP_003485979.1 | hypothetical protein | - |
| BI314_RS11795 () | 2645661..2647778 | - | 2118 | WP_015463321.1 | ATP-binding protein | - |
| BI314_RS11800 () | 2647775..2649169 | - | 1395 | WP_011051590.1 | SIR2 family protein | - |
| BI314_RS11805 () | 2649748..2649981 | - | 234 | WP_040107635.1 | hypothetical protein | - |
| BI314_RS11810 () | 2650214..2651215 | + | 1002 | WP_011051588.1 | replication protein | - |
| BI314_RS11815 () | 2651614..2651874 | - | 261 | WP_015463320.1 | hypothetical protein | - |
| BI314_RS11820 () | 2652435..2652635 | + | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| BI314_RS25200 () | 2652610..2653004 | + | 395 | Protein_2167 | relaxase | - |
| BI314_RS11825 () | 2653027..2653437 | - | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| BI314_RS11830 () | 2653541..2653870 | - | 330 | WP_015463316.1 | hypothetical protein | - |
| BI314_RS11835 () | 2653879..2654796 | - | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| BI314_RS11840 () | 2654793..2656379 | - | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| BI314_RS11845 () | 2656376..2656564 | - | 189 | WP_011051582.1 | hypothetical protein | - |
| BI314_RS11850 () | 2656615..2658723 | - | 2109 | WP_040155655.1 | AAA family ATPase | - |
| BI314_RS11855 () | 2658913..2659851 | - | 939 | WP_043930788.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| BI314_RS11860 () | 2660487..2661712 | - | 1226 | Protein_2175 | IS3 family transposase ISJsp1 | Transposase |
| BI314_RS11870 () | 2661761..2663029 | + | 1269 | Protein_2176 | Tn3 family transposase ISPsy42 | Transposase |
| BI314_RS11875 () | 2663199..2663477 | + | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| BI314_RS11880 () | 2663465..2663755 | + | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BI314_RS11885 () | 2663752..2664072 | + | 321 | WP_099522003.1 | hypothetical protein | - |
| BI314_RS11890 () | 2664343..2664522 | + | 180 | WP_015463309.1 | hypothetical protein | - |
| BI314_RS11900 () | 2664735..2665822 | + | 1088 | Protein_2181 | IS3 family transposase ISXcd1 | Transposase |
| BI314_RS11905 () | 2665862..2666995 | + | 1134 | Protein_2182 | IS5 family transposase ISXo4 | Transposase |
| BI314_RS25205 () | 2667287..2667480 | + | 194 | Protein_2183 | hypothetical protein | - |
| BI314_RS11910 () | 2667587..2667955 | - | 369 | WP_015472110.1 | hypothetical protein | - |
| BI314_RS11915 () | 2668883..2669404 | - | 522 | WP_011051570.1 | hypothetical protein | - |
| BI314_RS11920 () | 2669414..2671585 | - | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| BI314_RS11930 () | 2672486..2673577 | - | 1092 | WP_015463304.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| BI314_RS11940 () | 2673866..2674267 | - | 402 | WP_003485983.1 | H-NS histone family protein | - |
| BI314_RS11945 () | 2674487..2674663 | + | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| BI314_RS11950 () | 2674679..2677297 | + | 2619 | WP_011051566.1 | DNA ligase D | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0.003 |