MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP018801 Location: 1098834..1130714 Organism: Escherichia coli strain tolC- Replicon: chromosome
Accession: NZ_CP018801 Location: 1098834..1130714 Organism: Escherichia coli strain tolC- Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BTD92_RS05760 () | 1095018..1096286 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| BTD92_RS05765 () | 1096306..1097283 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| BTD92_RS26095 () | 1097619..1099871 | - | 2253 | Protein_1033 | hypothetical protein | - |
| BTD92_RS26100 () | 1101257..1102630 | + | 1374 | Protein_1034 | DUF5507 domain-containing protein | - |
| BTD92_RS05805 () | 1102994..1103203 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| BTD92_RS05815 () | 1103358..1103477 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| BTD92_RS25655 () | 1103542..1108122 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| BTD92_RS05830 () | 1108486..1108815 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| BTD92_RS05835 () | 1108836..1109153 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| BTD92_RS05840 () | 1109191..1109391 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| BTD92_RS05845 () | 1109400..1109882 | - | 483 | WP_001407480.1 | RadC family protein | - |
| BTD92_RS05850 () | 1109891..1110349 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| BTD92_RS05855 () | 1110452..1110675 | - | 224 | Protein_1043 | DUF905 family protein | - |
| BTD92_RS05860 () | 1111247..1112950 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| BTD92_RS05865 () | 1113092..1114101 | + | 1010 | Protein_1045 | arsenic transporter | - |
| BTD92_RS05870 () | 1114114..1114428 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| BTD92_RS05875 () | 1114653..1115120 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| BTD92_RS05880 () | 1115144..1115587 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| BTD92_RS05885 () | 1115587..1115823 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| BTD92_RS05890 () | 1115864..1116565 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| BTD92_RS05895 () | 1116782..1117603 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| BTD92_RS05900 () | 1117695..1118558 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| BTD92_RS05905 () | 1118913..1119284 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| BTD92_RS05910 () | 1119277..1120350 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| BTD92_RS05915 () | 1120492..1120755 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| BTD92_RS05920 () | 1121115..1122731 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| BTD92_RS05925 () | 1122728..1124917 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| BTD92_RS05930 () | 1125095..1125721 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| BTD92_RS05935 () | 1125874..1127283 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| BTD92_RS05940 () | 1127412..1127624 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| BTD92_RS05945 () | 1127668..1128624 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| BTD92_RS05950 () | 1128868..1130109 | - | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| BTD92_RS05960 () | 1130890..1131372 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| BTD92_RS05965 () | 1131543..1131980 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| BTD92_RS05970 () | 1131970..1132260 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| BTD92_RS05975 () | 1132322..1132663 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| BTD92_RS05980 () | 1132812..1134473 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| BTD92_RS05985 () | 1134559..1135437 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |