MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 80785 bp
Accession: NZ_CP018382 Location: 1427616..1508400 Organism: Burkholderia pseudomallei strain 2008724758 Replicon: chromosome
Accession: NZ_CP018382 Location: 1427616..1508400 Organism: Burkholderia pseudomallei strain 2008724758 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BOC43_RS07555 () | 1423071..1423838 | + | 768 | WP_197690675.1 | ATP-binding protein | - |
| BOC43_RS07560 () | 1423865..1424074 | + | 210 | WP_085547168.1 | KTSC domain-containing protein | - |
| BOC43_RS07565 () | 1424452..1425027 | + | 576 | WP_085547169.1 | recombinase family protein | - |
| BOC43_RS07570 () | 1425098..1426213 | - | 1116 | WP_009893924.1 | DUF3396 domain-containing protein | - |
| BOC43_RS07575 () | 1426223..1426957 | - | 735 | WP_085547170.1 | VRR-NUC domain-containing protein | - |
| BOC43_RS07580 () | 1426954..1427481 | - | 528 | WP_060819804.1 | PAAR domain-containing protein | - |
| BOC43_RS07585 () | 1427761..1427940 | + | 180 | WP_009893919.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| BOC43_RS07590 () | 1427984..1428400 | + | 417 | WP_011401461.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| BOC43_RS07605 () | 1429335..1430906 | - | 1572 | WP_085547171.1 | IS66 family transposase ISBcen14 | Transposase |
| BOC43_RS07610 () | 1430936..1431283 | - | 348 | WP_085547172.1 | IS66 family transposase ISBcen14 | Transposase |
| BOC43_RS07615 () | 1431280..1431561 | - | 282 | WP_101562118.1 | hypothetical protein | - |
| BOC43_RS40165 () | 1433768..1434196 | - | 429 | Protein_1216 | IS3 family transposase ISBps2 | Transposase |
| BOC43_RS39430 () | 1434194..1434967 | - | 774 | Protein_1217 | IS3 family transposase ISBps2 | Transposase |
| BOC43_RS40170 () | 1434964..1435113 | - | 150 | WP_004537646.1 | bacteriophage protein Gp44 | - |
| BOC43_RS07640 () | 1435372..1435952 | + | 581 | Protein_1219 | hypothetical protein | - |
| BOC43_RS39440 () | 1436183..1436482 | - | 300 | WP_160458000.1 | hypothetical protein | - |
| BOC43_RS07650 () | 1436449..1436670 | - | 222 | WP_004552390.1 | hypothetical protein | - |
| BOC43_RS40175 () | 1436806..1436937 | - | 132 | WP_009923452.1 | bacteriophage protein Gp48 | - |
| BOC43_RS07665 () | 1436947..1437222 | - | 276 | WP_085547174.1 | hypothetical protein | - |
| BOC43_RS07670 () | 1437890..1438063 | + | 174 | WP_009939402.1 | BrnT family toxin | Toxin Detail |
| BOC43_RS07675 () | 1438047..1438331 | + | 285 | WP_004525420.1 | BrnA antitoxin family protein | Antitoxin Detail |
| BOC43_RS07690 () | 1438978..1439361 | + | 384 | Protein_1226 | IS3 family transposase ISBps2 | Transposase |
| BOC43_RS07695 () | 1439324..1439752 | + | 429 | Protein_1227 | IS110 family transposase | - |
| BOC43_RS07700 () | 1439979..1440095 | - | 117 | Protein_1228 | IS3 family transposase ISBcen15 | Transposase |
| BOC43_RS07705 () | 1440342..1441802 | + | 1461 | WP_085547175.1 | metallophosphoesterase | - |
| BOC43_RS07710 () | 1441961..1443223 | + | 1263 | WP_004530738.1 | c-type cytochrome | - |
| BOC43_RS07715 () | 1443380..1444312 | + | 933 | WP_004554782.1 | glycerophosphoryl diester phosphodiesterase | - |
| BOC43_RS07720 () | 1444510..1444704 | + | 195 | Protein_1232 | IS21 family transposase ISBcen13 | Transposase |
| BOC43_RS07725 () | 1444827..1445135 | + | 309 | WP_004543837.1 | IS3 family transposase ISMex7 | Transposase |
| BOC43_RS07730 () | 1445132..1445539 | + | 408 | WP_080341108.1 | IS3 family transposase ISKpn11 | Transposase |
| BOC43_RS07735 () | 1446181..1447698 | + | 1518 | WP_038761766.1 | group II intron reverse transcriptase/maturase | - |
| BOC43_RS07740 () | 1447809..1448249 | + | 441 | WP_158359917.1 | IS3 family transposase ISBj3 | Transposase |
| BOC43_RS07745 () | 1448502..1448768 | + | 267 | Protein_1237 | transposase family protein | - |
| BOC43_RS07750 () | 1448807..1450057 | - | 1251 | WP_085547167.1 | IS256 family transposase IS1090 | Transposase |
| BOC43_RS07755 () | 1450122..1450370 | + | 249 | Protein_1239 | transposase | - |
| BOC43_RS07760 () | 1450402..1451136 | - | 735 | WP_004525427.1 | hypothetical protein | - |
| BOC43_RS07765 () | 1451127..1463504 | - | 12378 | WP_172408996.1 | LysM peptidoglycan-binding domain-containing protein | - |
| BOC43_RS07770 () | 1463518..1467081 | - | 3564 | WP_165496348.1 | hypothetical protein | - |
| BOC43_RS07775 () | 1467214..1467906 | - | 693 | WP_004538065.1 | hypothetical protein | - |
| BOC43_RS07780 () | 1468023..1468769 | - | 747 | WP_085547424.1 | DUF3596 domain-containing protein | - |
| BOC43_RS07785 () | 1468983..1469390 | + | 408 | WP_004530743.1 | hypothetical protein | - |
| BOC43_RS07790 () | 1469443..1471335 | + | 1893 | WP_197690676.1 | thiamine pyrophosphate-binding protein | - |
| BOC43_RS07795 () | 1471358..1471654 | + | 297 | Protein_1247 | glycosyltransferase family 2 protein | - |
| BOC43_RS07800 () | 1471658..1472707 | + | 1050 | WP_045720143.1 | membrane protein | - |
| BOC43_RS07805 () | 1473170..1473685 | - | 516 | Protein_1249 | ClbS/DfsB family four-helix bundle protein | - |
| BOC43_RS07810 () | 1473772..1474671 | - | 900 | WP_004542645.1 | HTH-type transcriptional regulator DmlR | VF |
| BOC43_RS07815 () | 1474801..1475526 | + | 726 | WP_041198532.1 | pirin family protein | - |
| BOC43_RS07825 () | 1475808..1476488 | + | 681 | WP_004553190.1 | DUF1275 family protein | - |
| BOC43_RS07830 () | 1476518..1477549 | - | 1032 | WP_009967748.1 | cyclic nucleotide-binding domain-containing protein | - |
| BOC43_RS07840 () | 1477888..1478820 | + | 933 | WP_076829871.1 | Transcriptional activator NphR | VF |
| BOC43_RS07845 () | 1478879..1479781 | - | 903 | WP_009967752.1 | helix-turn-helix transcriptional regulator | - |
| BOC43_RS07855 () | 1480131..1481333 | - | 1203 | WP_004553191.1 | MFS transporter | - |
| BOC43_RS07860 () | 1481330..1481632 | - | 303 | WP_004547132.1 | hypothetical protein | - |
| BOC43_RS07865 () | 1481739..1482650 | + | 912 | WP_004529948.1 | HTH-type transcriptional regulator DmlR | VF |
| BOC43_RS07870 () | 1482929..1483615 | - | 687 | WP_004551352.1 | hydrolase | - |
| BOC43_RS07875 () | 1484146..1484460 | + | 315 | WP_004530757.1 | XapX domain-containing protein | - |
| BOC43_RS07880 () | 1484453..1486351 | + | 1899 | WP_004549228.1 | amidohydrolase | - |
| BOC43_RS07885 () | 1486887..1487777 | + | 891 | WP_172408997.1 | glyoxalase | - |
| BOC43_RS07890 () | 1487815..1489461 | + | 1647 | WP_172408955.1 | alginate export family protein | - |
| BOC43_RS07900 () | 1490054..1490875 | + | 822 | WP_004525468.1 | alpha/beta hydrolase | - |
| BOC43_RS07905 () | 1490829..1491448 | + | 620 | Protein_1265 | LysR family transcriptional regulator | - |
| BOC43_RS07910 () | 1491766..1492395 | + | 630 | WP_004529957.1 | hypothetical protein | - |
| BOC43_RS07920 () | 1493078..1493683 | + | 606 | WP_004529959.1 | flavin reductase family protein | - |
| BOC43_RS07925 () | 1493820..1494197 | - | 378 | WP_004525472.1 | hypothetical protein | - |
| BOC43_RS07930 () | 1494520..1495854 | - | 1335 | WP_004551357.1 | PLP-dependent aminotransferase family protein | - |
| BOC43_RS07935 () | 1495943..1496560 | + | 618 | WP_004536989.1 | DJ-1/PfpI family protein | - |
| BOC43_RS07945 () | 1496916..1498004 | - | 1089 | WP_044363420.1 | serine hydrolase | - |
| BOC43_RS07950 () | 1498097..1498450 | - | 354 | WP_004529966.1 | hypothetical protein | - |
| BOC43_RS07960 () | 1498698..1498886 | + | 189 | WP_004525478.1 | hypothetical protein | - |
| BOC43_RS07965 () | 1499139..1501079 | + | 1941 | WP_076849784.1 | DNA polymerase/3'-5' exonuclease PolX | - |
| BOC43_RS07970 () | 1501350..1501757 | + | 408 | WP_004535185.1 | hypothetical protein | - |
| BOC43_RS07975 () | 1501855..1502127 | + | 273 | WP_085547181.1 | hypothetical protein | - |
| BOC43_RS07980 () | 1502124..1503788 | + | 1665 | WP_085547182.1 | TolC family protein | - |
| BOC43_RS07985 () | 1503785..1505086 | + | 1302 | WP_053566125.1 | copper oxidase | - |
| BOC43_RS07990 () | 1505205..1505570 | + | 366 | WP_038725082.1 | copper-binding protein | - |
| BOC43_RS07995 () | 1505611..1506000 | + | 390 | WP_041219499.1 | copper homeostasis periplasmic binding protein CopC | - |
| BOC43_RS08000 () | 1506000..1506944 | + | 945 | WP_085547183.1 | CopD family protein | - |
| BOC43_RS08005 () | 1507245..1509083 | + | 1839 | WP_050043267.1 | MCP four helix bundle domain-containing protein | - |
| BOC43_RS08010 () | 1509391..1510683 | - | 1293 | WP_004525489.1 | FAD-binding oxidoreductase | - |
| BOC43_RS08015 () | 1510754..1512058 | - | 1305 | WP_038750654.1 | FAD-binding oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|