MGE detailed information
MGE type: Prophage MGE length: 59728 bp
Accession: NZ_CP018302 Location: 1011497..1071224 Organism: Mycobacterium tuberculosis strain I0004000-1 Replicon: chromosome
Accession: NZ_CP018302 Location: 1011497..1071224 Organism: Mycobacterium tuberculosis strain I0004000-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BOJ12_RS04920 () | 1007302..1008012 | - | 711 | WP_003404690.1 | two-component system response regulator PrrA | - |
| BOJ12_RS04925 () | 1008143..1009630 | - | 1488 | WP_003404691.1 | acetyl-CoA carboxylase carboxyltransferase subunit beta | - |
| BOJ12_RS04930 () | 1009657..1010388 | + | 732 | WP_003404702.1 | enoyl-CoA hydratase | - |
| BOJ12_RS04935 () | 1010394..1011512 | + | 1119 | WP_003404705.1 | MBL fold metallo-hydrolase | - |
| BOJ12_RS04940 () | 1011605..1013185 | + | 1581 | WP_003909313.1 | serine hydrolase | - |
| BOJ12_RS04945 () | 1013182..1015575 | + | 2394 | WP_003898639.1 | cation-translocating P-type ATPase | - |
| BOJ12_RS21830 () | 1015848..1016006 | + | 159 | WP_003404720.1 | hypothetical protein | - |
| BOJ12_RS04950 () | 1016132..1016311 | + | 180 | WP_003898641.1 | antitoxin | Antitoxin Detail |
| BOJ12_RS04955 () | 1016317..1016751 | + | 435 | WP_003404726.1 | SRPBCC family protein | Toxin Detail |
| BOJ12_RS04960 () | 1016849..1017622 | + | 774 | WP_003404735.1 | VOC family protein | - |
| BOJ12_RS04965 () | 1017687..1018136 | + | 450 | WP_003404738.1 | hypothetical protein | - |
| BOJ12_RS04970 () | 1018271..1018501 | - | 231 | WP_003898642.1 | hypothetical protein | - |
| BOJ12_RS04975 () | 1018668..1020176 | - | 1509 | WP_003404742.1 | carotenoid oxygenase family protein | - |
| BOJ12_RS04980 () | 1020178..1021416 | - | 1239 | WP_003404744.1 | acetyl-CoA acetyltransferase | - |
| BOJ12_RS04985 () | 1021509..1022780 | - | 1272 | WP_003404747.1 | hypothetical protein | VF |
| BOJ12_RS04990 () | 1022795..1023094 | - | 300 | WP_003404748.1 | PE family protein | - |
| BOJ12_RS04995 () | 1023538..1025319 | + | 1782 | WP_003404749.1 | BCCT family transporter | - |
| BOJ12_RS05000 () | 1025316..1025573 | + | 258 | WP_003404750.1 | hypothetical protein | - |
| BOJ12_RS05005 () | 1025662..1026138 | + | 477 | WP_003898647.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| BOJ12_RS05010 () | 1026135..1026635 | + | 501 | WP_003404756.1 | GNAT family N-acetyltransferase | Toxin Detail |
| BOJ12_RS05020 () | 1026948..1028267 | - | 1320 | WP_003404757.1 | IS256 family transposase IS1554 | Transposase |
| BOJ12_RS05025 () | 1028555..1029136 | + | 582 | WP_003404760.1 | IS607 family transposase IS1535 | Transposase |
| BOJ12_RS05030 () | 1029136..1030788 | + | 1653 | WP_003404761.1 | IS607 family transposase IS1535 | Transposase |
| BOJ12_RS05035 () | 1030964..1032028 | - | 1065 | WP_003898648.1 | poly-gamma-glutamate hydrolase family protein | - |
| BOJ12_RS05040 () | 1032029..1033315 | - | 1287 | WP_003898649.1 | Nramp family divalent metal transporter | - |
| BOJ12_RS05045 () | 1033347..1034084 | - | 738 | WP_003404764.1 | flavodoxin family protein | - |
| BOJ12_RS05050 () | 1034161..1035237 | - | 1077 | WP_003404767.1 | hypothetical protein | - |
| BOJ12_RS05055 () | 1035291..1036082 | - | 792 | WP_003404769.1 | hypothetical protein | VF |
| BOJ12_RS05060 () | 1036354..1037466 | + | 1113 | WP_003404775.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| BOJ12_RS05065 () | 1037479..1038453 | + | 975 | WP_003404779.1 | phosphate ABC transporter permease subunit PstC | - |
| BOJ12_RS05070 () | 1038450..1039364 | + | 915 | WP_003898651.1 | phosphate ABC transporter permease PstA | - |
| BOJ12_RS05075 () | 1039371..1041365 | - | 1995 | WP_003404782.1 | hypothetical protein | VF |
| BOJ12_RS05080 () | 1041387..1042499 | - | 1113 | WP_003898652.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| BOJ12_RS05085 () | 1042715..1043545 | + | 831 | WP_003906469.1 | hypothetical protein | VF |
| BOJ12_RS05090 () | 1043566..1044690 | + | 1125 | WP_003900236.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| BOJ12_RS05095 () | 1044750..1045766 | + | 1017 | WP_003404792.1 | phosphate ABC transporter permease subunit PstC | - |
| BOJ12_RS05100 () | 1045768..1046673 | + | 906 | WP_003404794.1 | phosphate ABC transporter permease PstA | - |
| BOJ12_RS05105 () | 1046650..1047471 | - | 822 | WP_003404795.1 | Ku protein | - |
| BOJ12_RS05110 () | 1047587..1049866 | + | 2280 | WP_003898655.1 | ATP-dependent DNA ligase | - |
| BOJ12_RS05115 () | 1049863..1051797 | + | 1935 | WP_003404801.1 | fumarylacetoacetate hydrolase family protein | - |
| BOJ12_RS05120 () | 1052044..1052910 | - | 867 | WP_003404819.1 | TIGR03619 family F420-dependent LLM class oxidoreductase | - |
| BOJ12_RS05125 () | 1052995..1053768 | - | 774 | WP_003404823.1 | STAS domain-containing protein | - |
| BOJ12_RS05130 () | 1053811..1054089 | + | 279 | WP_003901948.1 | hypothetical protein | - |
| BOJ12_RS05135 () | 1054147..1055187 | - | 1041 | WP_003898656.1 | DUF4873 domain-containing protein | - |
| BOJ12_RS05140 () | 1055216..1055692 | + | 477 | WP_003404828.1 | Fpg/Nei family DNA glycosylase | - |
| BOJ12_RS05145 () | 1055710..1056459 | + | 750 | WP_003911341.1 | hypothetical protein | VF |
| BOJ12_RS05150 () | 1056475..1058136 | - | 1662 | WP_003404830.1 | glucose-6-phosphate isomerase | - |
| BOJ12_RS05165 () | 1058898..1059092 | + | 195 | WP_003404835.1 | hypothetical protein | - |
| BOJ12_RS05170 () | 1059097..1059414 | - | 318 | WP_003906472.1 | chorismate mutase | - |
| BOJ12_RS05175 () | 1059711..1062026 | + | 2316 | WP_003404859.1 | DNA helicase PcrA | - |
| BOJ12_RS05180 () | 1062107..1063105 | - | 999 | WP_003404862.1 | M23 family metallopeptidase | - |
| BOJ12_RS05185 () | 1063412..1064575 | + | 1164 | WP_003898659.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| BOJ12_RS05190 () | 1064597..1065499 | + | 903 | WP_009935735.1 | succinate--CoA ligase subunit alpha | - |
| BOJ12_RS05195 () | 1065562..1066410 | - | 849 | WP_003404873.1 | LLM class F420-dependent oxidoreductase | - |
| BOJ12_RS05205 () | 1066575..1067486 | + | 912 | WP_003404875.1 | DUF5336 domain-containing protein | - |
| BOJ12_RS05210 () | 1067526..1068893 | + | 1368 | WP_003901049.1 | hypothetical protein | - |
| BOJ12_RS05215 () | 1069009..1069656 | + | 648 | WP_003898661.1 | hypothetical protein | VF |
| BOJ12_RS05220 () | 1069653..1071224 | + | 1572 | WP_003404890.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| BOJ12_RS05225 () | 1071331..1072710 | + | 1380 | WP_003404892.1 | sigma 54-interacting transcriptional regulator | - |
| BOJ12_RS05230 () | 1072703..1074721 | + | 2019 | WP_003404895.1 | VWA domain-containing protein | - |
| BOJ12_RS05235 () | 1074775..1074996 | + | 222 | WP_003404898.1 | antitoxin VapB9 | - |
| BOJ12_RS05240 () | 1074993..1075376 | + | 384 | WP_003404903.1 | PIN domain-containing protein | - |
| BOJ12_RS05245 () | 1075522..1075869 | + | 348 | WP_003404907.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA10041 | NC_000962 | 1023865..1069776 | 0.008 |