MGE detailed information
MGE type: Prophage MGE length: 58526 bp
Accession: NZ_CP017680 Location: 1976147..2034672 Organism: Staphylococcus aureus strain CFSAN007851 Replicon: chromosome
Accession: NZ_CP017680 Location: 1976147..2034672 Organism: Staphylococcus aureus strain CFSAN007851 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB454_RS10055 () | 1972663..1972953 | - | 291 | WP_001792929.1 | MAP domain-containing protein | - |
| AB454_RS10060 () | 1972968..1974386 | - | 1419 | WP_096367965.1 | extracellular adherence protein Eap/Map | - |
| AB454_RS10065 () | 1974772..1975022 | + | 251 | Protein_1843 | sphingomyelin phosphodiesterase | - |
| AB454_RS10070 () | 1975344..1975523 | + | 180 | WP_000669791.1 | hypothetical protein | - |
| AB454_RS10080 () | 1975834..1976094 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| AB454_RS10085 () | 1976147..1976497 | - | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| AB454_RS10090 () | 1977009..1977344 | - | 336 | Protein_1847 | SH3 domain-containing protein | - |
| AB454_RS10110 () | 1977995..1978486 | - | 492 | WP_000920038.1 | Staphylokinase | VF |
| AB454_RS10115 () | 1978677..1979432 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| AB454_RS10120 () | 1979444..1979698 | - | 255 | WP_000611512.1 | phage holin | - |
| AB454_RS10125 () | 1979750..1979857 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 1979779..1979918 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1979779..1979918 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1979779..1979918 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1979779..1979918 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| AB454_RS10130 () | 1979910..1980086 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| AB454_RS10135 () | 1980195..1980968 | - | 774 | WP_000750412.1 | Enterotoxin type A | VF |
| AB454_RS10140 () | 1981341..1981715 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| AB454_RS10145 () | 1981771..1982058 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| AB454_RS10150 () | 1982104..1982256 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| AB454_RS10155 () | 1982249..1986029 | - | 3781 | Protein_1857 | hypothetical protein | - |
| AB454_RS10160 () | 1986045..1987535 | - | 1491 | WP_001154317.1 | phage tail family protein | - |
| AB454_RS10165 () | 1987535..1992184 | - | 4650 | WP_001133533.1 | phage tail tape measure protein | - |
| AB454_RS10170 () | 1992240..1992362 | - | 123 | WP_000570353.1 | hypothetical protein | - |
| AB454_RS10175 () | 1992422..1992868 | - | 447 | WP_000442601.1 | hypothetical protein | - |
| AB454_RS10180 () | 1992933..1993886 | - | 954 | WP_099143841.1 | Ig-like domain-containing protein | - |
| AB454_RS10185 () | 1993887..1994267 | - | 381 | WP_000611454.1 | hypothetical protein | - |
| AB454_RS10190 () | 1994264..1994641 | - | 378 | WP_000501244.1 | HK97 gp10 family phage protein | - |
| AB454_RS10195 () | 1994641..1994976 | - | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| AB454_RS10200 () | 1994963..1995295 | - | 333 | WP_001177483.1 | head-tail connector protein | - |
| AB454_RS10205 () | 1995304..1995462 | - | 159 | WP_001252099.1 | hypothetical protein | - |
| AB454_RS10210 () | 1995498..1996745 | - | 1248 | WP_000849950.1 | phage major capsid protein | - |
| AB454_RS10215 () | 1996833..1997417 | - | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| AB454_RS10220 () | 1997410..1998660 | - | 1251 | WP_000511065.1 | phage portal protein | - |
| AB454_RS10225 () | 1998666..1998866 | - | 201 | WP_000365299.1 | hypothetical protein | - |
| AB454_RS10230 () | 1998880..2000574 | - | 1695 | WP_000133304.1 | phage terminase large subunit | - |
| AB454_RS10235 () | 2000577..2001044 | - | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| AB454_RS10240 () | 2001173..2001517 | - | 345 | WP_000817289.1 | HNH endonuclease | - |
| AB454_RS10245 () | 2001533..2001985 | - | 453 | WP_000406191.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| AB454_RS10250 () | 2002100..2002570 | - | 471 | WP_000282755.1 | hypothetical protein | - |
| AB454_RS10260 () | 2002593..2002793 | - | 201 | WP_001570807.1 | DUF1514 family protein | - |
| AB454_RS10265 () | 2002793..2003443 | - | 651 | WP_001005262.1 | hypothetical protein | - |
| AB454_RS10270 () | 2003602..2003751 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| AB454_RS10275 () | 2003748..2003843 | - | 96 | Protein_1880 | DUF1381 domain-containing protein | - |
| AB454_RS10280 () | 2003828..2004079 | - | 252 | Protein_1881 | hypothetical protein | - |
| AB454_RS10285 () | 2004092..2004496 | - | 405 | WP_000401978.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AB454_RS10290 () | 2004505..2004723 | - | 219 | WP_000338527.1 | hypothetical protein | - |
| AB454_RS10295 () | 2004730..2005623 | - | 894 | WP_000148328.1 | DnaD domain-containing protein | - |
| AB454_RS10300 () | 2005653..2006123 | - | 471 | WP_000934765.1 | single-stranded DNA-binding protein | - |
| AB454_RS10305 () | 2006124..2006741 | - | 618 | WP_072353921.1 | MBL fold metallo-hydrolase | - |
| AB454_RS10310 () | 2006822..2007742 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| AB454_RS10315 () | 2007744..2009699 | - | 1956 | WP_047211354.1 | AAA family ATPase | - |
| AB454_RS10320 () | 2009696..2009959 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| AB454_RS10325 () | 2009968..2010228 | - | 261 | WP_000291488.1 | hypothetical protein ; Integrase | Integrase |
| AB454_RS10330 () | 2010322..2010483 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| AB454_RS10335 () | 2010480..2010800 | - | 321 | WP_099143842.1 | DUF771 domain-containing protein | - |
| AB454_RS10340 () | 2010859..2011491 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| AB454_RS10345 () | 2011506..2011646 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| AB454_RS10350 () | 2011677..2011874 | - | 198 | WP_001148861.1 | hypothetical protein | - |
| AB454_RS10355 () | 2011890..2012639 | - | 750 | WP_001148337.1 | phage antirepressor KilAC domain-containing protein | - |
| AB454_RS10360 () | 2012696..2013235 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| AB454_RS10365 () | 2013259..2013519 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| AB454_RS10370 () | 2013537..2013761 | - | 225 | WP_000338186.1 | DUF739 family protein | - |
| AB454_RS10375 () | 2013920..2014690 | + | 771 | WP_001208482.1 | helix-turn-helix domain-containing protein | - |
| AB454_RS10380 () | 2014886..2015614 | + | 729 | WP_001033320.1 | Enterotoxin type A | VF |
| AB454_RS10385 () | 2015638..2016366 | + | 729 | WP_000733771.1 | Enterotoxin type A | VF |
| AB454_RS10390 () | 2016450..2017487 | + | 1038 | WP_000857182.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| AB454_RS10395 () | 2017538..2018368 | + | 831 | Protein_1904 | Phospholipase C | VF |
| AB454_RS10400 () | 2018606..2019622 | - | 1017 | WP_000595401.1 | putative leukocidin-like protein 1 | VF |
| AB454_RS10405 () | 2019644..2020696 | - | 1053 | WP_000791417.1 | putative leukocidin-like protein 2 | VF |
| AB454_RS10410 () | 2021132..2022355 | + | 1224 | WP_000206623.1 | ArgE/DapE family deacylase | - |
| AB454_RS10415 () | 2022727..2023572 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| AB454_RS10420 () | 2023634..2024545 | - | 912 | WP_000825510.1 | Iron(3+)-hydroxamate-binding protein FhuD | VF |
| AB454_RS10425 () | 2024706..2026013 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| AB454_RS10435 () | 2026867..2027310 | - | 444 | WP_099143843.1 | GNAT family N-acetyltransferase | - |
| AB454_RS10440 () | 2027416..2027853 | - | 438 | WP_072419900.1 | hypothetical protein | - |
| AB454_RS10445 () | 2028170..2028760 | - | 591 | WP_001293059.1 | terminase small subunit | - |
| AB454_RS10450 () | 2028757..2028969 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| AB454_RS10455 () | 2029030..2029576 | + | 547 | Protein_1915 | site-specific integrase | - |
| AB454_RS10460 () | 2029671..2031287 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| AB454_RS10465 () | 2031363..2031647 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| AB454_RS10470 () | 2031822..2032565 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| AB454_RS10475 () | 2032590..2033849 | - | 1260 | WP_000120305.1 | hypothetical protein | VF |
| AB454_RS10480 () | 2034046..2034672 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| AB454_RS10490 () | 2035033..2035818 | + | 786 | WP_000867941.1 | carbon-nitrogen family hydrolase | - |
| AB454_RS10495 () | 2036417..2036551 | - | 135 | WP_001823225.1 | delta-lysin family phenol-soluble modulin | - |
| AB454_RS10500 () | 2036787..2037350 | + | 564 | WP_001105705.1 | accessory gene regulator AgrB | - |
| AB454_RS10505 () | 2037354..2037494 | + | 141 | WP_000735197.1 | cyclic lactone autoinducer peptide | - |
| AB454_RS10510 () | 2037519..2038811 | + | 1293 | WP_000387809.1 | GHKL domain-containing protein | - |
| AB454_RS10515 () | 2038830..2039546 | + | 717 | WP_000688492.1 | LytTR family DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus MW2 | Prophage | TA10154 | NC_003923 | 2047408..2102909 | 0.002 |