MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 132938 bp
Accession: NZ_CP017590 Location: 1..132938 Organism: Pantoea stewartii subsp. stewartii DC283 Replicon: plasmid pDSJ09
Accession: NZ_CP017590 Location: 1..132938 Organism: Pantoea stewartii subsp. stewartii DC283 Replicon: plasmid pDSJ09
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSJ_RS24730 () | 244..873 | + | 630 | WP_044241253.1 | IS66 family insertion sequence hypothetical protein | - |
| DSJ_RS24735 () | 870..1217 | + | 348 | WP_006117592.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| DSJ_RS24740 () | 1237..2808 | + | 1572 | WP_006117714.1 | IS66 family transposase | - |
| DSJ_RS27725 () | 3356..3751 | + | 396 | WP_141119394.1 | AAA family ATPase | - |
| DSJ_RS24750 () | 3696..4622 | - | 927 | WP_006120875.1 | hypothetical protein | - |
| DSJ_RS24765 () | 5056..6078 | - | 1023 | WP_006120876.1 | IS630 family transposase | - |
| DSJ_RS24770 () | 6284..7855 | - | 1572 | WP_006117714.1 | IS66 family transposase | - |
| DSJ_RS24775 () | 7875..8222 | - | 348 | WP_006117592.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| DSJ_RS24780 () | 8219..8848 | - | 630 | WP_044241253.1 | IS66 family insertion sequence hypothetical protein | - |
| DSJ_RS24785 () | 9124..10491 | - | 1368 | WP_006120879.1 | group II intron reverse transcriptase/maturase | - |
| DSJ_RS24795 () | 10929..11396 | - | 468 | WP_006120880.1 | hypothetical protein | - |
| DSJ_RS24800 () | 11772..11975 | - | 204 | WP_006120881.1 | hypothetical protein | - |
| DSJ_RS24805 () | 12004..12267 | - | 264 | WP_044242597.1 | hypothetical protein | - |
| DSJ_RS24810 () | 12271..12936 | - | 666 | WP_006120883.1 | plasmid partitioning/stability family protein | - |
| DSJ_RS24815 () | 12939..13910 | - | 972 | WP_080577432.1 | StbA family protein | - |
| DSJ_RS24820 () | 14142..14573 | + | 432 | WP_006120886.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DSJ_RS24825 () | 14573..15844 | + | 1272 | WP_006120887.1 | Y-family DNA polymerase | - |
| DSJ_RS24830 () | 16289..17044 | + | 756 | WP_082999281.1 | replication initiation protein RepE | - |
| DSJ_RS24835 () | 17321..18675 | - | 1355 | Protein_19 | hypothetical protein | - |
| DSJ_RS24840 () | 18928..19554 | + | 627 | WP_044242602.1 | ParA family plasmid-partitioning AAA ATPase | - |
| DSJ_RS24845 () | 19551..19856 | + | 306 | WP_044242605.1 | hypothetical protein | - |
| DSJ_RS24850 () | 19897..20682 | - | 786 | WP_006120890.1 | site-specific integrase | - |
| DSJ_RS24855 () | 20730..21212 | - | 483 | WP_006120891.1 | M50 family metallopeptidase | - |
| DSJ_RS24865 () | 21587..21895 | - | 309 | WP_006120893.1 | hypothetical protein | - |
| DSJ_RS24870 () | 22145..23716 | - | 1572 | WP_006120894.1 | IS66 family transposase | - |
| DSJ_RS24875 () | 23736..24083 | - | 348 | WP_006117600.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| DSJ_RS24880 () | 24080..24709 | - | 630 | WP_044241253.1 | IS66 family insertion sequence hypothetical protein | - |
| DSJ_RS24885 () | 25134..25430 | - | 297 | WP_006120896.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DSJ_RS24890 () | 25417..25683 | - | 267 | WP_006120897.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| DSJ_RS24895 () | 25757..26086 | - | 330 | Protein_30 | ATP-binding protein | - |
| DSJ_RS24900 () | 26257..26400 | - | 144 | Protein_31 | ATP-binding protein | - |
| DSJ_RS24905 () | 27047..27712 | - | 666 | Protein_32 | RHS repeat-associated core domain-containing protein | - |
| DSJ_RS24910 () | 28357..29010 | - | 654 | Protein_33 | RHS repeat-associated core domain-containing protein | - |
| DSJ_RS27730 () | 29387..29491 | - | 105 | Protein_34 | N-acetylmuramoyl-L-alanine amidase | - |
| DSJ_RS24920 () | 30071..30733 | - | 663 | Protein_35 | RHS repeat-associated core domain-containing protein | - |
| DSJ_RS24925 () | 31207..34893 | - | 3687 | WP_006120905.1 | RHS repeat protein | - |
| DSJ_RS24930 () | 35172..38564 | - | 3393 | WP_006120906.1 | hypothetical protein | - |
| DSJ_RS24935 () | 38611..39054 | - | 444 | WP_006120907.1 | lysozyme | - |
| DSJ_RS24940 () | 39051..39323 | - | 273 | WP_044242610.1 | phage holin family protein | - |
| DSJ_RS24945 () | 39316..39639 | - | 324 | WP_044242612.1 | hypothetical protein | - |
| DSJ_RS24950 () | 40606..41235 | + | 630 | WP_044241253.1 | IS66 family insertion sequence hypothetical protein | - |
| DSJ_RS24955 () | 41232..41579 | + | 348 | WP_006117592.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| DSJ_RS24960 () | 41599..43170 | + | 1572 | WP_006120745.1 | IS66 family transposase | - |
| DSJ_RS24970 () | 43619..43933 | + | 315 | WP_044242615.1 | hypothetical protein | - |
| DSJ_RS24975 () | 43994..44455 | + | 462 | WP_052310146.1 | hypothetical protein | - |
| DSJ_RS24980 () | 44473..45684 | + | 1212 | Protein_46 | type IV secretion system DNA-binding domain-containing protein | - |
| DSJ_RS27735 () | 45728..46360 | + | 633 | WP_044242617.1 | hypothetical protein | - |
| DSJ_RS24985 () | 46341..46874 | + | 534 | WP_082999282.1 | hypothetical protein | - |
| DSJ_RS24990 () | 46903..47691 | + | 789 | WP_006120918.1 | thioredoxin domain-containing protein | - |
| DSJ_RS24995 () | 48280..49293 | + | 1014 | WP_006120919.1 | replication initiation protein | - |
| DSJ_RS25000 () | 50319..51218 | - | 900 | Protein_51 | transposase | - |
| DSJ_RS25005 () | 51352..54399 | - | 3048 | WP_006122256.1 | Tn3 family transposase | - |
| DSJ_RS25010 () | 54549..55133 | + | 585 | WP_044243369.1 | recombinase family protein | - |
| DSJ_RS25015 () | 55327..56088 | + | 762 | WP_006122254.1 | N-acetylmuramoyl-L-alanine amidase | - |
| DSJ_RS25020 () | 56102..56854 | + | 753 | WP_044243367.1 | hypothetical protein | - |
| DSJ_RS25025 () | 56940..57107 | - | 168 | Protein_56 | cell wall hydrolase | - |
| DSJ_RS25030 () | 57196..57825 | + | 630 | WP_044241253.1 | IS66 family insertion sequence hypothetical protein | - |
| DSJ_RS25035 () | 57822..58169 | + | 348 | WP_006117592.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| DSJ_RS25040 () | 58189..59760 | + | 1572 | WP_006120105.1 | IS66 family transposase | - |
| DSJ_RS25045 () | 59681..61042 | - | 1362 | Protein_60 | SH3 domain-containing protein | - |
| DSJ_RS25050 () | 61112..61918 | - | 807 | WP_085980116.1 | DUF1460 domain-containing protein | - |
| DSJ_RS28025 () | 62225..62389 | - | 165 | WP_006122298.1 | hypothetical protein | - |
| DSJ_RS25055 () | 62430..62744 | - | 315 | WP_006122297.1 | CcdB family protein | Toxin Detail |
| DSJ_RS25060 () | 62747..62983 | - | 237 | WP_025861853.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| DSJ_RS25065 () | 63124..63693 | - | 570 | WP_006122295.1 | hypothetical protein | - |
| DSJ_RS25070 () | 64112..64864 | + | 753 | Protein_66 | IS110 family transposase | - |
| DSJ_RS25075 () | 64895..66466 | - | 1572 | WP_006117591.1 | IS66 family transposase | - |
| DSJ_RS25080 () | 66486..66833 | - | 348 | WP_006118527.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| DSJ_RS25085 () | 66830..67459 | - | 630 | WP_044241253.1 | IS66 family insertion sequence hypothetical protein | - |
| DSJ_RS25090 () | 68881..69543 | - | 663 | Protein_70 | RHS repeat-associated core domain-containing protein | - |
| DSJ_RS25095 () | 69794..70139 | + | 346 | Protein_71 | transposase zinc-binding domain-containing protein | - |
| DSJ_RS27740 () | 70730..71392 | - | 663 | Protein_72 | RHS repeat-associated core domain-containing protein | - |
| DSJ_RS25105 () | 71780..72790 | + | 1011 | WP_006122290.1 | IS110 family transposase | - |
| DSJ_RS25115 () | 73824..74699 | - | 876 | WP_006122289.1 | incFII family plasmid replication initiator RepA | - |
| DSJ_RS25120 () | 74680..74757 | - | 78 | WP_032489431.1 | RepA leader peptide Tap | - |
| DSJ_RS25125 () | 74976..75254 | - | 279 | WP_006122288.1 | replication regulatory protein RepA | - |
| DSJ_RS25130 () | 75407..75952 | - | 546 | WP_006122287.1 | phospholipase D family protein | - |
| DSJ_RS25135 () | 76100..76900 | - | 801 | WP_006122286.1 | thioredoxin domain-containing protein | - |
| DSJ_RS25140 () | 76902..77264 | - | 363 | WP_044243426.1 | hypothetical protein | - |
| DSJ_RS25145 () | 77315..77584 | - | 270 | WP_044243397.1 | hypothetical protein | - |
| DSJ_RS25150 () | 77685..82835 | - | 5151 | Protein_81 | conjugative transfer relaxase/helicase TraI | - |
| DSJ_RS25155 () | 82835..85024 | - | 2190 | WP_006122282.1 | type IV conjugative transfer system coupling protein TraD | - |
| DSJ_RS27745 () | 85021..85251 | - | 231 | WP_141119421.1 | hypothetical protein | - |
| DSJ_RS25160 () | 85446..86020 | - | 575 | Protein_84 | hypothetical protein | - |
| DSJ_RS25165 () | 86021..88909 | - | 2889 | WP_006122281.1 | conjugal transfer mating pair stabilization protein TraG | - |
| DSJ_RS25170 () | 88909..90276 | - | 1368 | WP_006122280.1 | F-type conjugal transfer protein TraH | - |
| DSJ_RS25175 () | 90269..90606 | - | 338 | Protein_87 | hypothetical protein | - |
| DSJ_RS25180 () | 90676..91791 | - | 1116 | WP_006122277.1 | IS630 family transposase | - |
| DSJ_RS25185 () | 91934..92311 | + | 378 | WP_006122276.1 | hypothetical protein | - |
| DSJ_RS25190 () | 92394..93425 | + | 1032 | WP_044241399.1 | IS630 family transposase | - |
| DSJ_RS25195 () | 93705..94382 | + | 678 | WP_044243389.1 | hypothetical protein | - |
| DSJ_RS25200 () | 94748..95254 | - | 507 | WP_100208653.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| DSJ_RS25210 () | 95645..96088 | - | 444 | WP_044243383.1 | hypothetical protein | - |
| DSJ_RS25215 () | 96075..96374 | - | 300 | WP_100208652.1 | hypothetical protein | - |
| DSJ_RS25220 () | 96469..96696 | + | 228 | WP_006122273.1 | antitoxin | Antitoxin Detail |
| DSJ_RS25225 () | 96696..97094 | + | 399 | WP_006122272.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| DSJ_RS25230 () | 97096..97890 | - | 795 | WP_006122271.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| DSJ_RS25235 () | 97887..98246 | - | 360 | WP_080577513.1 | conjugal transfer protein TraN | - |
| DSJ_RS25240 () | 98209..99744 | - | 1536 | WP_006122269.1 | IS66 family transposase | - |
| DSJ_RS25245 () | 99764..100111 | - | 348 | WP_006117592.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| DSJ_RS25250 () | 100108..100737 | - | 630 | WP_044241253.1 | IS66 family insertion sequence hypothetical protein | - |
| DSJ_RS25255 () | 100768..101442 | - | 675 | WP_006122268.1 | type-F conjugative transfer system secretin TraK | - |
| DSJ_RS25260 () | 101429..101995 | - | 567 | WP_006122267.1 | type IV conjugative transfer system protein TraE | - |
| DSJ_RS25265 () | 102017..102322 | - | 306 | WP_006122266.1 | type IV conjugative transfer system protein TraL | - |
| DSJ_RS25270 () | 102341..102745 | - | 405 | WP_006122265.1 | conjugal transfer protein TraA | - |
| DSJ_RS25275 () | 103219..103569 | + | 351 | WP_044243379.1 | hypothetical protein | - |
| DSJ_RS25280 () | 103556..103804 | - | 249 | WP_006122263.1 | TraY domain-containing protein | - |
| DSJ_RS28145 () | 103778..103924 | - | 147 | Protein_108 | TraY domain-containing protein | - |
| DSJ_RS25285 () | 104435..104719 | + | 285 | WP_044243377.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DSJ_RS25290 () | 104710..105192 | + | 483 | WP_006122261.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DSJ_RS25295 () | 105272..105937 | - | 666 | WP_044243375.1 | LuxR C-terminal-related transcriptional regulator | - |
| DSJ_RS25300 () | 105921..106334 | + | 414 | Protein_112 | DUF4113 domain-containing protein | - |
| DSJ_RS25305 () | 106542..106769 | - | 228 | WP_020314634.1 | hypothetical protein | - |
| DSJ_RS25310 () | 106814..107440 | - | 627 | WP_044243371.1 | ParA family protein | - |
| DSJ_RS25315 () | 107920..108540 | + | 621 | WP_006122260.1 | recombinase family protein | - |
| DSJ_RS25320 () | 108944..109417 | - | 474 | Protein_116 | IS91 family transposase | - |
| DSJ_RS25325 () | 109503..110126 | + | 624 | WP_071988728.1 | IS66 family insertion sequence hypothetical protein | - |
| DSJ_RS25330 () | 110123..110470 | + | 348 | WP_044241407.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| DSJ_RS25335 () | 110490..112061 | + | 1572 | WP_006122257.1 | IS66 family transposase | - |
| DSJ_RS25345 () | 112581..115628 | - | 3048 | WP_006122256.1 | Tn3 family transposase | - |
| DSJ_RS25350 () | 115778..116362 | + | 585 | WP_044243369.1 | recombinase family protein | - |
| DSJ_RS25355 () | 116556..117317 | + | 762 | WP_006122254.1 | N-acetylmuramoyl-L-alanine amidase | - |
| DSJ_RS25360 () | 117331..118083 | + | 753 | WP_044243367.1 | hypothetical protein | - |
| DSJ_RS25365 () | 118169..119584 | - | 1416 | Protein_124 | SH3 domain-containing protein | - |
| DSJ_RS25370 () | 119654..120460 | - | 807 | WP_085980116.1 | DUF1460 domain-containing protein | - |
| DSJ_RS25375 () | 120774..121805 | - | 1032 | WP_044241399.1 | IS630 family transposase | - |
| DSJ_RS25380 () | 121908..122845 | - | 938 | Protein_127 | ISL3 family transposase | - |
| DSJ_RS25385 () | 122842..123057 | - | 216 | WP_044243362.1 | hypothetical protein | - |
| DSJ_RS25390 () | 123091..123795 | - | 705 | WP_044243361.1 | T3SS effector protein NleD | - |
| DSJ_RS25395 () | 123939..124100 | - | 162 | WP_006122244.1 | hypothetical protein | - |
| DSJ_RS25400 () | 124278..125309 | + | 1032 | WP_044241399.1 | IS630 family transposase | - |
| DSJ_RS25405 () | 125330..125683 | - | 354 | Protein_132 | protein kinase | - |
| DSJ_RS27750 () | 125754..126011 | - | 258 | WP_141119420.1 | hypothetical protein | - |
| DSJ_RS25410 () | 126156..126728 | - | 573 | WP_006122248.1 | recombinase family protein | - |
| DSJ_RS25415 () | 126892..127059 | + | 168 | Protein_135 | DUF4158 domain-containing protein | - |
| DSJ_RS25420 () | 127160..128191 | + | 1032 | WP_044241399.1 | IS630 family transposase | - |
| DSJ_RS25425 () | 128233..128448 | + | 216 | Protein_137 | transposase | - |
| DSJ_RS25430 () | 128718..129008 | - | 291 | WP_006122243.1 | hypothetical protein | - |
| DSJ_RS25435 () | 129061..129747 | - | 687 | WP_044243359.1 | ParA family protein | - |
| DSJ_RS25440 () | 130901..131104 | + | 204 | WP_006122241.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| DSJ_RS25445 () | 131104..131481 | + | 378 | WP_006122240.1 | hypothetical protein | - |
| DSJ_RS25450 () | 131884..132204 | + | 321 | WP_006122239.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DSJ_RS25455 () | 132197..132481 | + | 285 | WP_044243356.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|