MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 65483 bp
Accession: NZ_CP017588 Location: 1..65483 Organism: Pantoea stewartii subsp. stewartii DC283 Replicon: plasmid pDSJ07
Accession: NZ_CP017588 Location: 1..65483 Organism: Pantoea stewartii subsp. stewartii DC283 Replicon: plasmid pDSJ07
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSJ_RS23715 () | 378..1679 | - | 1302 | WP_006122344.1 | T3SS effector OspC family protein | - |
| DSJ_RS23725 () | 3232..3438 | - | 207 | WP_080577525.1 | Hin recombinase | - |
| DSJ_RS23730 () | 3610..4803 | - | 1194 | WP_006122348.1 | IS4 family transposase | - |
| DSJ_RS23735 () | 5036..5401 | + | 366 | WP_141119424.1 | topoisomerase C-terminal repeat-containing protein | - |
| DSJ_RS23740 () | 5398..5787 | + | 390 | WP_006122350.1 | H-NS histone family protein | - |
| DSJ_RS23745 () | 6430..7449 | + | 1020 | Protein_6 | MFS transporter | - |
| DSJ_RS23750 () | 7612..7896 | - | 285 | WP_044243550.1 | CcdB family protein | Toxin Detail |
| DSJ_RS23755 () | 7896..8141 | - | 246 | WP_044243551.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| DSJ_RS23760 () | 8200..8412 | - | 213 | WP_044243552.1 | type II toxin-antitoxin system MqsA family antitoxin | - |
| DSJ_RS23765 () | 8405..8659 | - | 255 | WP_044243555.1 | hypothetical protein | - |
| DSJ_RS23770 () | 8656..9198 | - | 543 | WP_044243569.1 | hypothetical protein | - |
| DSJ_RS23775 () | 9666..10853 | - | 1188 | WP_006118957.1 | IS4 family transposase | - |
| DSJ_RS23780 () | 10969..11511 | + | 543 | WP_044243557.1 | hypothetical protein | - |
| DSJ_RS23785 () | 11578..11790 | + | 213 | WP_006122356.1 | hypothetical protein | - |
| DSJ_RS23790 () | 11780..11998 | + | 219 | WP_044243560.1 | hypothetical protein | - |
| DSJ_RS23795 () | 12096..12425 | + | 330 | WP_044243562.1 | hypothetical protein | - |
| DSJ_RS23800 () | 12477..12671 | + | 195 | WP_006122357.1 | hypothetical protein | - |
| DSJ_RS23810 () | 12938..13567 | + | 630 | WP_044241253.1 | IS66 family insertion sequence hypothetical protein | - |
| DSJ_RS23815 () | 13564..13911 | + | 348 | WP_006122358.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| DSJ_RS23820 () | 13931..15502 | + | 1572 | WP_006119686.1 | IS66 family transposase | - |
| DSJ_RS23825 () | 15495..16517 | + | 1023 | WP_044243452.1 | IS630 family transposase | - |
| DSJ_RS23835 () | 16832..18403 | - | 1572 | WP_006117591.1 | IS66 family transposase | - |
| DSJ_RS23840 () | 18423..18770 | - | 348 | WP_006117592.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| DSJ_RS23845 () | 18767..19396 | - | 630 | WP_044241253.1 | IS66 family insertion sequence hypothetical protein | - |
| DSJ_RS23850 () | 19511..21130 | + | 1620 | WP_044242367.1 | ISL3 family transposase | - |
| DSJ_RS23855 () | 21202..21816 | - | 615 | WP_006120386.1 | recombinase family protein | - |
| DSJ_RS23860 () | 21875..22336 | - | 462 | WP_006120387.1 | Lrp/AsnC family transcriptional regulator | - |
| DSJ_RS23865 () | 22455..23402 | + | 948 | WP_006120388.1 | DMT family transporter | - |
| DSJ_RS23870 () | 23644..24843 | - | 1200 | WP_071988773.1 | TniQ family protein | - |
| DSJ_RS23875 () | 24857..25765 | - | 909 | WP_006120390.1 | TniB family NTP-binding protein | - |
| DSJ_RS23880 () | 25768..27446 | - | 1679 | Protein_31 | transposase | - |
| DSJ_RS23885 () | 27633..28571 | + | 939 | WP_006120395.1 | recombinase family protein | - |
| DSJ_RS23890 () | 29463..33335 | - | 3873 | WP_100208625.1 | inverse autotransporter beta domain-containing protein | - |
| DSJ_RS23895 () | 33970..34173 | + | 204 | Protein_34 | IS3 family transposase | - |
| DSJ_RS23900 () | 34273..35304 | + | 1032 | WP_044241399.1 | IS630 family transposase | - |
| DSJ_RS23905 () | 35416..35780 | - | 365 | Protein_36 | helix-turn-helix domain-containing protein | - |
| DSJ_RS23910 () | 35935..36357 | - | 423 | WP_006120399.1 | hypothetical protein | - |
| DSJ_RS23915 () | 36438..37214 | - | 777 | WP_044242411.1 | N-acetylmuramoyl-L-alanine amidase | - |
| DSJ_RS23920 () | 37217..38419 | - | 1203 | WP_006120402.1 | glycoside hydrolase family 10 protein | - |
| DSJ_RS23925 () | 38695..39678 | + | 984 | WP_006120403.1 | recombinase family protein | - |
| DSJ_RS23930 () | 39701..40036 | - | 336 | WP_044242374.1 | hypothetical protein | - |
| DSJ_RS23935 () | 40033..40740 | - | 708 | WP_044242375.1 | ParA family protein | - |
| DSJ_RS23945 () | 41943..42809 | - | 867 | WP_006120404.1 | incFII family plasmid replication initiator RepA | - |
| DSJ_RS23950 () | 43091..43396 | - | 306 | WP_006120406.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DSJ_RS23955 () | 43384..43671 | - | 288 | WP_044242376.1 | ribbon-helix-helix protein, CopG family | Antitoxin Detail |
| DSJ_RS23960 () | 43915..44214 | + | 300 | WP_167387070.1 | PAS domain-containing protein | - |
| DSJ_RS23965 () | 44247..46155 | - | 1909 | Protein_47 | Tn3 family transposase | - |
| DSJ_RS23970 () | 46229..46858 | + | 630 | WP_044241253.1 | IS66 family insertion sequence hypothetical protein | - |
| DSJ_RS23975 () | 46855..47202 | + | 348 | WP_006117592.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| DSJ_RS23980 () | 47222..48793 | + | 1572 | WP_006118561.1 | IS66 family transposase | - |
| DSJ_RS23985 () | 48714..50075 | - | 1362 | Protein_51 | SH3 domain-containing protein | - |
| DSJ_RS23990 () | 50145..50951 | - | 807 | WP_085980116.1 | DUF1460 domain-containing protein | - |
| DSJ_RS23995 () | 51263..51925 | + | 663 | Protein_53 | RHS repeat-associated core domain-containing protein | - |
| DSJ_RS24000 () | 52701..53192 | - | 492 | Protein_54 | Tn3 family transposase | - |
| DSJ_RS24005 () | 53191..53598 | - | 408 | Protein_55 | DEAD/DEAH box helicase | - |
| DSJ_RS24010 () | 53627..54202 | - | 576 | WP_006120551.1 | recombinase family protein | - |
| DSJ_RS24015 () | 55149..55811 | - | 663 | Protein_57 | RHS repeat-associated core domain-containing protein | - |
| DSJ_RS24025 () | 56891..57790 | + | 900 | Protein_58 | transposase | - |
| DSJ_RS24030 () | 57714..58064 | - | 351 | WP_071988825.1 | SDR family oxidoreductase | - |
| DSJ_RS24035 () | 58144..58398 | - | 255 | WP_071988826.1 | NAD-dependent epimerase/dehydratase family protein | - |
| DSJ_RS24040 () | 58825..59238 | - | 414 | WP_044243514.1 | hypothetical protein | - |
| DSJ_RS24045 () | 60127..60321 | - | 195 | WP_006122336.1 | hypothetical protein | - |
| DSJ_RS24050 () | 60373..60702 | - | 330 | WP_044243532.1 | hypothetical protein | - |
| DSJ_RS24055 () | 60794..61009 | - | 216 | WP_006122338.1 | hypothetical protein | - |
| DSJ_RS24065 () | 61324..61614 | - | 291 | WP_044243518.1 | hypothetical protein | - |
| DSJ_RS24070 () | 61678..61983 | - | 306 | WP_044243533.1 | hypothetical protein | - |
| DSJ_RS24075 () | 62451..62807 | - | 357 | WP_006122339.1 | hypothetical protein | - |
| DSJ_RS24080 () | 62804..63139 | - | 336 | WP_001147119.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DSJ_RS24085 () | 63531..63851 | + | 321 | WP_044243522.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DSJ_RS24090 () | 63841..64125 | + | 285 | WP_006122340.1 | helix-turn-helix domain-containing protein | - |
| DSJ_RS24095 () | 64558..64791 | + | 234 | Protein_71 | DnaJ domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|