MGE detailed information
MGE type: Prophage MGE length: 48341 bp
Accession: NZ_CP017444 Location: 2441578..2489918 Organism: Escherichia coli O157:H7 strain 8368 Replicon: chromosome
Accession: NZ_CP017444 Location: 2441578..2489918 Organism: Escherichia coli O157:H7 strain 8368 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4C39_RS12420 () | 2437827..2440253 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| A4C39_RS12425 () | 2440452..2440757 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| A4C39_RS12430 () | 2440865..2441575 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| A4C39_RS12435 () | 2441578..2442138 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| A4C39_RS12440 () | 2442173..2442514 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| A4C39_RS12445 () | 2442649..2442975 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| A4C39_RS12450 () | 2443247..2443929 | - | 683 | Protein_2363 | DUF3596 domain-containing protein | - |
| A4C39_RS12455 () | 2443964..2444215 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| A4C39_RS12460 () | 2444288..2446759 | - | 2472 | WP_000048458.1 | exonuclease | - |
| A4C39_RS12465 () | 2446852..2447043 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| A4C39_RS12470 () | 2447040..2447228 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| A4C39_RS12475 () | 2447797..2448015 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| A4C39_RS12480 () | 2448087..2448386 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| A4C39_RS12490 () | 2448739..2449017 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A4C39_RS12495 () | 2449019..2449210 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| A4C39_RS29225 () | 2449231..2449602 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| A4C39_RS12505 () | 2449700..2450002 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| A4C39_RS12510 () | 2449999..2450424 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| A4C39_RS12515 () | 2450447..2451409 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| A4C39_RS12520 () | 2451416..2452156 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| A4C39_RS12530 () | 2452182..2452951 | + | 770 | Protein_2377 | DUF1627 domain-containing protein | - |
| A4C39_RS12535 () | 2452967..2453362 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| A4C39_RS12540 () | 2453419..2454003 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| A4C39_RS29230 () | 2454119..2454223 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| A4C39_RS12550 () | 2454469..2454624 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| A4C39_RS29235 () | 2454792..2455070 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| A4C39_RS12560 () | 2455072..2456121 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| A4C39_RS12565 () | 2456134..2456493 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| A4C39_RS12570 () | 2456490..2457179 | + | 690 | WP_001059381.1 | antiterminator | - |
| A4C39_RS12590 () | 2457818..2458246 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| A4C39_RS12595 () | 2458243..2458498 | + | 256 | Protein_2387 | DUF3927 family protein | - |
| A4C39_RS12605 () | 2458725..2460575 | + | 1851 | WP_000023185.1 | SASA family carbohydrate esterase | - |
| A4C39_RS12615 () | 2461015..2461230 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| A4C39_RS12620 () | 2461235..2461579 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| A4C39_RS12625 () | 2461630..2462163 | + | 534 | WP_000992137.1 | lysozyme | - |
| A4C39_RS12630 () | 2462434..2463003 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| A4C39_RS31085 () | 2463003..2463149 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| A4C39_RS31095 () | 2463377..2463562 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| A4C39_RS12645 () | 2463987..2464214 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| A4C39_RS12650 () | 2464256..2464621 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| A4C39_RS12660 () | 2464911..2465474 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| A4C39_RS12665 () | 2465471..2467132 | + | 1662 | WP_001507810.1 | terminase large subunit | - |
| A4C39_RS12670 () | 2467196..2469133 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| A4C39_RS12675 () | 2469178..2469399 | + | 222 | WP_001063094.1 | hypothetical protein | - |
| A4C39_RS12680 () | 2469345..2471924 | + | 2580 | WP_001304108.1 | phage portal protein | - |
| A4C39_RS12685 () | 2471927..2472253 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| A4C39_RS12690 () | 2472263..2472613 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| A4C39_RS12695 () | 2472610..2473056 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| A4C39_RS12700 () | 2473053..2473397 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| A4C39_RS12705 () | 2473456..2474172 | + | 717 | WP_001275500.1 | tail protein | - |
| A4C39_RS12710 () | 2474178..2474552 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| A4C39_RS12715 () | 2474648..2474857 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| A4C39_RS12720 () | 2474910..2477990 | + | 3081 | WP_000212897.1 | phage tail tape measure protein | - |
| A4C39_RS12725 () | 2477983..2478324 | + | 342 | WP_000807954.1 | phage tail protein | - |
| A4C39_RS12730 () | 2478324..2478761 | + | 438 | WP_001152128.1 | phage minor tail protein L | - |
| A4C39_RS12735 () | 2478949..2482425 | + | 3477 | WP_000514792.1 | host specificity protein J | - |
| A4C39_RS12740 () | 2482493..2483092 | + | 600 | WP_001228304.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| A4C39_RS12745 () | 2483244..2484557 | + | 1314 | WP_000216532.1 | phage tail protein | - |
| A4C39_RS12750 () | 2484559..2484828 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| A4C39_RS29255 () | 2484941..2485515 | + | 575 | Protein_2416 | DUF1076 domain-containing protein | - |
| A4C39_RS12755 () | 2485855..2487180 | - | 1326 | WP_001025672.1 | type III secretion system effector NleA | - |
| A4C39_RS12760 () | 2487841..2488755 | - | 915 | Protein_2418 | tyrosine-type recombinase/integrase | - |
| A4C39_RS31100 () | 2488778..2488900 | + | 123 | WP_106409364.1 | phage tail fiber C-terminal domain-containing protein | - |
| A4C39_RS12765 () | 2489007..2489918 | + | 912 | WP_000950979.1 | type III secretion system effector kinase NleH1-2 | - |
| A4C39_RS12770 () | 2489984..2490553 | + | 570 | WP_000938103.1 | T3SS effector caspase inhibitor NleF | - |
| A4C39_RS29265 () | 2490600..2491234 | - | 635 | Protein_2422 | transposase | - |
| A4C39_RS12785 () | 2491519..2493057 | - | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| A4C39_RS12790 () | 2493107..2493454 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| A4C39_RS12795 () | 2493451..2493831 | - | 381 | WP_001171554.1 | IS66 family insertion sequence hypothetical protein | - |
| A4C39_RS29270 () | 2493926..2494744 | + | 819 | Protein_2426 | IS256 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | Prophage | TA20321 | NC_002655 | 2282958..2329636 | 0.008 |