MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92219 bp
Accession: NZ_CP017281 Location: 1..92219 Organism: Klebsiella variicola strain GJ1 Replicon: plasmid pKPGJ-1b
Accession: NZ_CP017281 Location: 1..92219 Organism: Klebsiella variicola strain GJ1 Replicon: plasmid pKPGJ-1b
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BBD63_RS29530 () | 1864..2202 | + | 339 | WP_145952641.1 | hypothetical protein | - |
| BBD63_RS00015 () | 2608..2968 | + | 361 | Protein_2 | DUF596 domain-containing protein | - |
| BBD63_RS29315 () | 2990..3588 | - | 599 | Protein_3 | AraC family transcriptional regulator ligand-binding domain-containing protein | - |
| BBD63_RS00025 () | 3967..4887 | - | 921 | WP_012540028.1 | AraC family transcriptional regulator | - |
| BBD63_RS00030 () | 4992..5825 | + | 834 | WP_004136823.1 | oxidoreductase | - |
| BBD63_RS00035 () | 6045..7040 | - | 996 | WP_004136825.1 | IS110 family transposase | - |
| BBD63_RS00040 () | 7494..8438 | - | 945 | WP_077138888.1 | alpha/beta hydrolase | - |
| BBD63_RS00045 () | 8824..9495 | + | 672 | WP_077138864.1 | SOS response-associated peptidase | - |
| BBD63_RS00050 () | 9706..10596 | + | 891 | WP_077138865.1 | DUF2971 domain-containing protein | - |
| BBD63_RS00055 () | 10733..10987 | - | 255 | WP_044246670.1 | hypothetical protein | - |
| BBD63_RS00060 () | 11104..11334 | - | 231 | WP_049118762.1 | hypothetical protein | - |
| BBD63_RS00065 () | 11348..11551 | - | 204 | WP_009484305.1 | hemolysin expression modulator Hha | - |
| BBD63_RS00070 () | 11612..12106 | - | 495 | WP_077138866.1 | DNA-binding protein | - |
| BBD63_RS00075 () | 12140..12658 | - | 519 | WP_077138889.1 | hypothetical protein | - |
| BBD63_RS00080 () | 12709..12963 | - | 255 | WP_032700773.1 | hypothetical protein | - |
| BBD63_RS00085 () | 13243..15492 | - | 2250 | WP_077138867.1 | hypothetical protein | - |
| BBD63_RS00090 () | 15494..16588 | - | 1095 | WP_077138868.1 | transcriptional regulator | - |
| BBD63_RS00100 () | 17182..17400 | + | 219 | WP_015632547.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| BBD63_RS00105 () | 17402..17707 | + | 306 | WP_012539978.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| BBD63_RS00110 () | 17894..18898 | + | 1005 | WP_077138869.1 | hypothetical protein | - |
| BBD63_RS00115 () | 19096..19875 | + | 780 | WP_029497485.1 | site-specific integrase | - |
| BBD63_RS00120 () | 19933..20190 | - | 258 | WP_032433931.1 | hypothetical protein | - |
| BBD63_RS30055 () | 20318..20431 | - | 114 | WP_032072094.1 | hypothetical protein | - |
| BBD63_RS00125 () | 21063..21818 | + | 756 | WP_012539983.1 | replication initiation protein RepE | - |
| BBD63_RS00135 () | 22609..23814 | + | 1206 | WP_015632469.1 | AAA family ATPase | - |
| BBD63_RS00140 () | 23814..24788 | + | 975 | WP_032741647.1 | ParB/RepB/Spo0J family partition protein | - |
| BBD63_RS00145 () | 24870..26141 | - | 1272 | WP_077138871.1 | Y-family DNA polymerase | - |
| BBD63_RS00150 () | 26141..26572 | - | 432 | WP_020805749.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| BBD63_RS00155 () | 26805..27776 | + | 972 | WP_077138872.1 | StbA family protein | - |
| BBD63_RS00160 () | 27779..28450 | + | 672 | WP_001568039.1 | plasmid partitioning/stability family protein | - |
| BBD63_RS00165 () | 28512..28742 | + | 231 | WP_048322267.1 | hypothetical protein | - |
| BBD63_RS30775 () | 28914..29106 | + | 193 | Protein_32 | hypothetical protein | - |
| BBD63_RS00170 () | 29178..29879 | + | 702 | WP_001568041.1 | DNA methylase | - |
| BBD63_RS00175 () | 29879..30100 | + | 222 | WP_032433933.1 | hypothetical protein | - |
| BBD63_RS00180 () | 30110..30529 | + | 420 | WP_049117709.1 | DUF1380 domain-containing protein | - |
| BBD63_RS00185 () | 30583..31350 | + | 768 | WP_077138873.1 | hypothetical protein | - |
| BBD63_RS00190 () | 31423..32004 | + | 582 | Protein_37 | plasmid SOS inhibition protein A | - |
| BBD63_RS00195 () | 32004..32231 | + | 228 | WP_048334732.1 | hypothetical protein | - |
| BBD63_RS00205 () | 32704..32865 | + | 162 | WP_004118124.1 | type I toxin-antitoxin system Hok family toxin | - |
| BBD63_RS00210 () | 33176..34588 | - | 1413 | WP_060598838.1 | amino acid permease | - |
| BBD63_RS00215 () | 35135..36037 | - | 903 | WP_060598839.1 | LysR family transcriptional regulator | - |
| BBD63_RS00220 () | 36320..37459 | + | 1140 | WP_072122725.1 | PLP-dependent aspartate aminotransferase family protein | - |
| BBD63_RS00225 () | 37480..38409 | + | 930 | WP_158236771.1 | DMT family transporter | - |
| BBD63_RS00230 () | 38524..38825 | + | 302 | Protein_44 | DDE-type integrase/transposase/recombinase | - |
| BBD63_RS00235 () | 39127..39438 | + | 312 | WP_023292165.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| BBD63_RS00240 () | 39435..39851 | + | 417 | WP_072122726.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| BBD63_RS00245 () | 40668..41048 | + | 381 | WP_077138875.1 | hypothetical protein | - |
| BBD63_RS00250 () | 41114..41461 | + | 348 | WP_077138876.1 | hypothetical protein | - |
| BBD63_RS00255 () | 41549..41779 | + | 231 | WP_004197732.1 | hypothetical protein | - |
| BBD63_RS00260 () | 41826..42659 | + | 834 | WP_077138877.1 | type I restriction-modification system subunit M | - |
| BBD63_RS00265 () | 43284..43814 | + | 531 | WP_077138878.1 | antirestriction protein | - |
| BBD63_RS00270 () | 43852..44331 | - | 480 | WP_077138879.1 | transglycosylase SLT domain-containing protein | - |
| BBD63_RS00275 () | 44753..45151 | + | 399 | WP_077138880.1 | relaxosome protein TraM | - |
| BBD63_RS00280 () | 45324..46010 | + | 687 | WP_077138881.1 | transcriptional regulator TraJ family protein | - |
| BBD63_RS00285 () | 46089..46475 | + | 387 | WP_004152495.1 | TraY domain-containing protein | - |
| BBD63_RS00290 () | 46529..46897 | + | 369 | WP_049155512.1 | type IV conjugative transfer system pilin TraA | - |
| BBD63_RS00295 () | 46911..47216 | + | 306 | WP_004178059.1 | type IV conjugative transfer system protein TraL | - |
| BBD63_RS00300 () | 47236..47802 | + | 567 | WP_004194424.1 | type IV conjugative transfer system protein TraE | - |
| BBD63_RS00305 () | 47789..48529 | + | 741 | WP_060598874.1 | type-F conjugative transfer system secretin TraK | - |
| BBD63_RS00310 () | 48529..49953 | + | 1425 | WP_060598873.1 | conjugal transfer protein TraB | - |
| BBD63_RS00315 () | 49946..50542 | + | 597 | WP_060598872.1 | conjugal transfer protein TraP | - |
| BBD63_RS00320 () | 50565..51149 | + | 585 | WP_060598871.1 | type IV conjugative transfer system lipoprotein TraV | - |
| BBD63_RS00325 () | 51281..51691 | + | 411 | WP_060598870.1 | hypothetical protein | - |
| BBD63_RS00330 () | 51696..51980 | + | 285 | WP_060598886.1 | hypothetical protein | - |
| BBD63_RS00335 () | 52004..52228 | + | 225 | WP_060598869.1 | hypothetical protein | - |
| BBD63_RS00340 () | 52221..52532 | + | 312 | WP_077138882.1 | hypothetical protein | - |
| BBD63_RS00345 () | 52599..53003 | + | 405 | WP_060598867.1 | hypothetical protein | - |
| BBD63_RS00350 () | 53085..53369 | + | 285 | WP_101417384.1 | hypothetical protein | - |
| BBD63_RS00355 () | 53377..53775 | + | 399 | WP_072198239.1 | hypothetical protein | - |
| BBD63_RS00360 () | 53847..56486 | + | 2640 | WP_060598865.1 | type IV secretion system protein TraC | - |
| BBD63_RS00365 () | 56486..56875 | + | 390 | WP_020803372.1 | type-F conjugative transfer system protein TrbI | - |
| BBD63_RS00370 () | 56875..57501 | + | 627 | WP_020314628.1 | type-F conjugative transfer system protein TraW | - |
| BBD63_RS00375 () | 57512..58504 | + | 993 | WP_020323530.1 | conjugal transfer pilus assembly protein TraU | - |
| BBD63_RS00380 () | 58519..59067 | + | 549 | WP_022631518.1 | hypothetical protein | - |
| BBD63_RS00385 () | 59042..59731 | - | 690 | WP_032427592.1 | hypothetical protein | - |
| BBD63_RS00390 () | 59788..60390 | + | 603 | WP_077138883.1 | hypothetical protein | - |
| BBD63_RS00395 () | 60535..61182 | + | 648 | WP_039698503.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| BBD63_RS00400 () | 61241..63196 | + | 1956 | WP_060598862.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| BBD63_RS00405 () | 63229..63510 | + | 282 | WP_022644736.1 | hypothetical protein | - |
| BBD63_RS00410 () | 63500..63727 | + | 228 | WP_012540032.1 | conjugal transfer protein TrbE | - |
| BBD63_RS00415 () | 63738..64064 | + | 327 | WP_012539967.1 | hypothetical protein | - |
| BBD63_RS00420 () | 64085..64837 | + | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| BBD63_RS00425 () | 64848..65087 | + | 240 | WP_023340931.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| BBD63_RS00430 () | 65059..65616 | + | 558 | WP_032433944.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| BBD63_RS00435 () | 65662..66105 | + | 444 | WP_040172400.1 | F-type conjugal transfer protein TrbF | - |
| BBD63_RS00440 () | 66083..67462 | + | 1380 | WP_072198238.1 | conjugal transfer protein TraH | - |
| BBD63_RS00445 () | 67462..70284 | + | 2823 | WP_060598861.1 | conjugal transfer mating pair stabilization protein TraG | - |
| BBD63_RS29535 () | 70308..70910 | + | 603 | WP_048263624.1 | hypothetical protein | - |
| BBD63_RS00455 () | 71161..71892 | + | 732 | WP_016831056.1 | complement resistance protein TraT | - |
| BBD63_RS00460 () | 72252..74552 | + | 2301 | Protein_90 | type IV conjugative transfer system coupling protein TraD | - |
| BBD63_RS00465 () | 74552..79813 | + | 5262 | WP_077138884.1 | conjugative transfer relaxase/helicase TraI | - |
| BBD63_RS00470 () | 79903..80628 | + | 726 | WP_025712712.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| BBD63_RS00475 () | 80783..81379 | + | 597 | WP_077138885.1 | fertility inhibition protein FinO | - |
| BBD63_RS00480 () | 81400..81747 | + | 348 | WP_015632524.1 | hypothetical protein | - |
| BBD63_RS00485 () | 82218..82862 | + | 645 | WP_049246155.1 | hypothetical protein | - |
| BBD63_RS00490 () | 82918..83568 | + | 651 | WP_060598856.1 | DUF2726 domain-containing protein | - |
| BBD63_RS00495 () | 83565..83873 | + | 309 | WP_070612642.1 | hypothetical protein | - |
| BBD63_RS00500 () | 84051..84530 | + | 480 | WP_072198240.1 | phospholipase D family protein | - |
| BBD63_RS00505 () | 84850..85128 | + | 279 | WP_004199332.1 | replication regulatory protein RepA | - |
| BBD63_RS00510 () | 85345..85422 | + | 78 | WP_099913970.1 | RepA leader peptide Tap | - |
| BBD63_RS00515 () | 85415..86272 | + | 858 | WP_004200825.1 | incFII family plasmid replication initiator RepA | - |
| BBD63_RS00535 () | 87405..88463 | + | 1059 | WP_071905682.1 | patatin-like phospholipase family protein | - |
| BBD63_RS00540 () | 88450..89514 | + | 1065 | WP_077138887.1 | hypothetical protein | - |
| BBD63_RS00545 () | 89511..91280 | + | 1770 | WP_015632531.1 | ThiF family adenylyltransferase | - |
| BBD63_RS00550 () | 91255..91716 | + | 462 | WP_032433950.1 | Mov34/MPN/PAD-1 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|