MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 38116 bp
Accession: NZ_CP017192 Location: 1..38116 Organism: Xanthomonas campestris pv. vesicatoria str. 85-10 Replicon: plasmid p_XCV_2
Accession: NZ_CP017192 Location: 1..38116 Organism: Xanthomonas campestris pv. vesicatoria str. 85-10 Replicon: plasmid p_XCV_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BHE83_RS23245 () | 792..1814 | + | 1023 | WP_007968768.1 | Type IV secretion system protein VirB11 | VF |
| BHE83_RS23250 () | 1825..2712 | + | 888 | WP_041854937.1 | Type IV secretion system protein virB1 | VF |
| BHE83_RS23255 () | 2758..3345 | + | 588 | WP_011345600.1 | hypothetical protein | - |
| BHE83_RS23260 () | 3388..3963 | + | 576 | WP_041854932.1 | Phospholipase D | VF |
| BHE83_RS23265 () | 3974..4387 | + | 414 | WP_041854931.1 | hypothetical protein | - |
| BHE83_RS23270 () | 4441..4857 | + | 417 | WP_017159868.1 | hypothetical protein | - |
| BHE83_RS23275 () | 4994..5212 | + | 219 | WP_033478260.1 | antitoxin MazE family protein | Antitoxin Detail |
| BHE83_RS23280 () | 5209..5535 | + | 327 | WP_007968778.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| BHE83_RS23285 () | 5605..8580 | - | 2976 | WP_011345597.1 | Multifunctional conjugation protein TraI | Relaxase |
| BHE83_RS23290 () | 8594..10168 | - | 1575 | WP_011345596.1 | type IV secretion system DNA-binding domain-containing protein | - |
| BHE83_RS23295 () | 10172..10369 | - | 198 | WP_011345595.1 | hypothetical protein | - |
| BHE83_RS25380 () | 10441..10782 | - | 342 | WP_029561219.1 | hypothetical protein | - |
| BHE83_RS23305 () | 10981..11601 | - | 621 | WP_011345593.1 | hypothetical protein | - |
| BHE83_RS23310 () | 11714..12007 | - | 294 | WP_011345592.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BHE83_RS23315 () | 12004..12273 | - | 270 | WP_033481412.1 | hypothetical protein | - |
| BHE83_RS23320 () | 12371..12766 | - | 396 | WP_011345590.1 | hypothetical protein | - |
| BHE83_RS23325 () | 13155..13610 | + | 456 | WP_011345589.1 | hypothetical protein | - |
| BHE83_RS23330 () | 13607..14293 | + | 687 | WP_011345588.1 | hypothetical protein | - |
| BHE83_RS23345 () | 15559..15915 | + | 357 | WP_041854930.1 | hypothetical protein | - |
| BHE83_RS23350 () | 16322..17548 | - | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| BHE83_RS23355 () | 17636..17866 | - | 231 | WP_046935364.1 | hypothetical protein | - |
| BHE83_RS23360 () | 17953..18915 | - | 963 | WP_011345584.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| BHE83_RS23365 () | 19074..19760 | - | 687 | WP_007968793.1 | DNA-binding protein | - |
| BHE83_RS23375 () | 20236..20862 | + | 627 | WP_007974205.1 | Chromosome-partitioning ATPase Soj | VF |
| BHE83_RS23380 () | 20859..21185 | + | 327 | WP_007974207.1 | hypothetical protein | - |
| BHE83_RS23385 () | 21431..21646 | + | 216 | WP_011345582.1 | antitoxin MazE family protein | Antitoxin Detail |
| BHE83_RS23390 () | 21646..21966 | + | 321 | WP_007974210.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| BHE83_RS23395 () | 22635..23453 | - | 819 | WP_011345581.1 | hypothetical protein | - |
| BHE83_RS23400 () | 23959..24288 | - | 330 | WP_007967027.1 | hypothetical protein | - |
| BHE83_RS23405 () | 24792..25073 | + | 282 | WP_041854934.1 | hypothetical protein | - |
| BHE83_RS23410 () | 25102..25479 | + | 378 | WP_011345609.1 | TrbC/VirB2 family protein | - |
| BHE83_RS23415 () | 25476..25775 | + | 300 | WP_041854933.1 | VirB3 family type IV secretion system protein | - |
| BHE83_RS23420 () | 25798..28431 | + | 2634 | WP_011345608.1 | Type IV secretion system protein virB4 | VF |
| BHE83_RS23425 () | 28551..29474 | - | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| BHE83_RS23430 () | 29689..29928 | + | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| BHE83_RS23435 () | 29928..30347 | + | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| BHE83_RS23440 () | 30352..33327 | + | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| BHE83_RS23445 () | 33346..34044 | + | 699 | WP_005918428.1 | UPF0149 family protein | - |
| BHE83_RS23450 () | 34105..34677 | + | 573 | WP_011345607.1 | hypothetical protein | - |
| BHE83_RS23455 () | 34728..34943 | + | 216 | WP_017164424.1 | hypothetical protein | - |
| BHE83_RS23460 () | 34936..35343 | + | 408 | WP_011345606.1 | hypothetical protein | - |
| BHE83_RS23465 () | 35331..36197 | + | 867 | WP_011345605.1 | type IV secretion system protein | - |
| BHE83_RS23470 () | 36194..36868 | + | 675 | WP_011345604.1 | type IV secretion system protein | - |
| BHE83_RS23475 () | 36893..37675 | + | 783 | WP_011345603.1 | Type IV secretion system protein virB9 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|