MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 88902 bp
Accession: NZ_CP016936 Location: 1..88902 Organism: Yersinia enterocolitica strain YE7 Replicon: plasmid unnamed2
Accession: NZ_CP016936 Location: 1..88902 Organism: Yersinia enterocolitica strain YE7 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BED34_RS22005 () | 44..1451 | + | 1408 | Protein_0 | T3SS effector protein-tyrosine-phosphatase YopH | - |
| BED34_RS22010 () | 1679..2104 | - | 426 | WP_010891235.1 | hypothetical protein | VF |
| BED34_RS23920 () | 2308..3479 | - | 1172 | Protein_2 | IS3 family transposase | - |
| BED34_RS22025 () | 3714..4106 | - | 393 | WP_010891236.1 | YopE regulator | VF |
| BED34_RS22030 () | 4298..4957 | + | 660 | WP_072089396.1 | Outer membrane virulence protein YopE | VF |
| BED34_RS22035 () | 5097..5396 | - | 300 | WP_014609469.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BED34_RS22040 () | 5389..5631 | - | 243 | WP_005176524.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| BED34_RS23925 () | 5797..6089 | - | 293 | Protein_7 | IS6 family transposase ISEas1 | Transposase |
| BED34_RS22045 () | 6469..7434 | - | 966 | WP_050294053.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| BED34_RS22050 () | 7431..8597 | - | 1167 | WP_010891239.1 | Sporulation initiation inhibitor protein Soj | VF |
| BED34_RS22060 () | 9039..9509 | + | 471 | WP_010891240.1 | IS481 family transposase ISAzs36 | Transposase |
| BED34_RS22065 () | 9570..9788 | - | 219 | WP_013749479.1 | hypothetical protein | - |
| BED34_RS22070 () | 10101..11229 | + | 1129 | Protein_12 | IS3 family transposase ISYal1 | Transposase |
| BED34_RS22080 () | 11321..11671 | + | 351 | WP_016266427.1 | Yop proteins translocation protein M | VF |
| BED34_RS22085 () | 11844..12677 | + | 834 | Protein_14 | Tn3 family transposase TnpA_Tn3 | Transposase |
| BED34_RS23930 () | 12773..13334 | - | 562 | Protein_15 | transposase family protein | - |
| BED34_RS22095 () | 13932..15350 | + | 1419 | WP_050294042.1 | Adhesin YadA | VF |
| BED34_RS22100 () | 15420..16295 | + | 876 | WP_013749484.1 | DMT family transporter | - |
| BED34_RS22105 () | 16617..17069 | - | 453 | WP_010891241.1 | PprA | - |
| BED34_RS22110 () | 17225..18076 | - | 852 | WP_050294041.1 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| BED34_RS22115 () | 18237..18818 | + | 582 | WP_050294040.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| BED34_RS22120 () | 18836..19261 | - | 426 | WP_010891244.1 | glutaredoxin-dependent arsenate reductase | - |
| BED34_RS22125 () | 19274..20563 | - | 1290 | WP_057618950.1 | arsenite efflux transporter membrane subunit ArsB | - |
| BED34_RS22130 () | 20609..20929 | - | 321 | WP_013749489.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| BED34_RS22135 () | 21015..21713 | + | 699 | WP_050294038.1 | arsenic resistance NADPH-dependent reductase ArsH | - |
| BED34_RS22140 () | 21825..22187 | + | 363 | Protein_25 | hypothetical protein | - |
| BED34_RS22150 () | 22478..23144 | + | 667 | Protein_26 | Multifunctional conjugation protein TraI | Relaxase |
| BED34_RS22155 () | 23160..24249 | - | 1090 | Protein_27 | IS3 family transposase ISYal1 | Transposase |
| BED34_RS24535 () | 24318..24455 | - | 138 | Protein_28 | transposase | - |
| BED34_RS24540 () | 24540..24867 | + | 328 | Protein_29 | DDE-type integrase/transposase/recombinase | - |
| BED34_RS22160 () | 25053..25598 | + | 546 | WP_050294029.1 | Phospholipase D | VF |
| BED34_RS22165 () | 25736..25990 | + | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| BED34_RS23565 () | 26232..26306 | + | 75 | WP_071598612.1 | RepA leader peptide Tap | - |
| BED34_RS22170 () | 26287..27165 | + | 879 | WP_162467786.1 | incFII family plasmid replication initiator RepA | - |
| BED34_RS22175 () | 28155..28700 | - | 546 | WP_050294028.1 | hypothetical protein | - |
| BED34_RS22180 () | 28837..29424 | + | 588 | WP_080357947.1 | Adenosine monophosphate-protein transferase SoFic | VF |
| BED34_RS22185 () | 29424..29681 | + | 258 | Protein_36 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| BED34_RS22190 () | 29681..30469 | + | 789 | Protein_37 | Tn3 family transposase ISPsy39 | Transposase |
| BED34_RS23945 () | 30718..31558 | - | 841 | Protein_38 | IS3 family transposase | - |
| BED34_RS24555 () | 31620..31709 | - | 90 | WP_069009728.1 | IS3 family transposase ISEam1 | Transposase |
| BED34_RS22210 () | 31871..32320 | + | 450 | WP_050294025.1 | hypothetical protein | VF |
| BED34_RS22215 () | 32328..34517 | + | 2190 | WP_069009721.1 | Protein kinase YpkA | VF |
| BED34_RS22220 () | 34998..35864 | + | 867 | WP_057618955.1 | Effector protein YopJ | VF |
| BED34_RS22225 () | 36388..37125 | - | 738 | WP_071890449.1 | complement resistance protein TraT | - |
| BED34_RS24560 () | 37162..37448 | - | 287 | Protein_44 | IS3 family transposase | - |
| BED34_RS22235 () | 37607..38155 | - | 549 | WP_010891202.1 | hypothetical protein | VF |
| BED34_RS22240 () | 38676..39644 | + | 969 | WP_050294022.1 | Cysteine protease YopT | VF |
| BED34_RS22245 () | 39644..40036 | + | 393 | WP_010891204.1 | Chaperone protein SycT | VF |
| BED34_RS24565 () | 40442..40599 | + | 158 | Protein_48 | DDE-type integrase/transposase/recombinase | - |
| BED34_RS22255 () | 40671..41760 | + | 1090 | Protein_49 | IS3 family transposase ISYal1 | Transposase |
| BED34_RS22260 () | 41935..42072 | - | 138 | WP_002212997.1 | hypothetical protein | - |
| BED34_RS24570 () | 42368..42654 | - | 287 | Protein_51 | DDE-type integrase/transposase/recombinase | - |
| BED34_RS22270 () | 43425..44528 | + | 1104 | WP_010891206.1 | Outer membrane protein YopM | VF |
| BED34_RS24575 () | 44571..45077 | - | 507 | Protein_53 | transposase | - |
| BED34_RS22285 () | 45302..46222 | - | 921 | WP_010891207.1 | Protein YopD | VF |
| BED34_RS22290 () | 46241..47446 | - | 1206 | WP_013749455.1 | Protein YopB | VF |
| BED34_RS22295 () | 47424..47930 | - | 507 | WP_050294002.1 | Chaperone protein IpgC | VF |
| BED34_RS22300 () | 47933..48913 | - | 981 | WP_069009749.1 | Virulence-associated V antigen | VF |
| BED34_RS22305 () | 48915..49202 | - | 288 | WP_010891211.1 | hypothetical protein | VF |
| BED34_RS22310 () | 49244..49684 | - | 441 | WP_010891212.1 | hypothetical protein | VF |
| BED34_RS22315 () | 49681..51795 | - | 2115 | WP_057618910.1 | Invasion protein InvA | VF |
| BED34_RS22320 () | 51782..52126 | - | 345 | WP_002229791.1 | Chaperone protein YscY | VF |
| BED34_RS22325 () | 52123..52491 | - | 369 | WP_010891214.1 | Yop proteins translocation protein X | VF |
| BED34_RS22330 () | 52488..52859 | - | 372 | WP_010891215.1 | Chaperone protein SycN | VF |
| BED34_RS22335 () | 52846..53124 | - | 279 | WP_002212965.1 | Protein TyeA | VF |
| BED34_RS22340 () | 53105..53986 | - | 882 | WP_050293999.1 | Outer membrane protein YopN | VF |
| BED34_RS22345 () | 54184..55503 | + | 1320 | WP_010891217.1 | putative ATP synthase YscN | VF |
| BED34_RS22350 () | 55500..55964 | + | 465 | WP_005176819.1 | Yop proteins translocation protein O | VF |
| BED34_RS22355 () | 55964..56848 | + | 885 | Protein_68 | hypothetical protein | VF |
| BED34_RS22360 () | 57203..57796 | + | 594 | Protein_69 | hypothetical protein | VF |
| BED34_RS22365 () | 57793..58716 | + | 924 | WP_005176825.1 | Yop proteins translocation protein Q | VF |
| BED34_RS22370 () | 58713..59366 | + | 654 | WP_005176829.1 | Surface presentation of antigens protein SpaP | VF |
| BED34_RS22375 () | 59368..59634 | + | 267 | WP_057618912.1 | hypothetical protein | VF |
| BED34_RS22380 () | 59631..60416 | + | 786 | WP_013749462.1 | Surface presentation of antigens protein SpaR | VF |
| BED34_RS22385 () | 60416..61480 | + | 1065 | WP_010891221.1 | Yop proteins translocation protein U | VF |
| BED34_RS22390 () | 62056..62451 | + | 396 | WP_005176443.1 | Exoenzyme S synthesis protein B | VF |
| BED34_RS22395 () | 62575..63390 | + | 816 | WP_013749464.1 | Virulence regulon transcriptional activator VirF | VF |
| BED34_RS22400 () | 63470..63568 | + | 99 | WP_010891223.1 | type III secretion system protein YscA | - |
| BED34_RS22405 () | 63794..64207 | + | 414 | WP_050293998.1 | Chaperone protein YscB | VF |
| BED34_RS22410 () | 64213..66036 | + | 1824 | WP_050293997.1 | Yop proteins translocation protein C | VF |
| BED34_RS22415 () | 66033..67289 | + | 1257 | WP_050293996.1 | Yop proteins translocation protein D | VF |
| BED34_RS22420 () | 67286..67489 | + | 204 | WP_050293995.1 | Putative Yop proteins translocation protein E | VF |
| BED34_RS22425 () | 67486..67749 | + | 264 | WP_014609477.1 | Yop proteins translocation protein F | VF |
| BED34_RS22430 () | 67751..68098 | + | 348 | WP_014609476.1 | Putative Yop proteins translocation protein G | VF |
| BED34_RS22435 () | 68095..68592 | + | 498 | WP_005176477.1 | Yop proteins translocation protein H | VF |
| BED34_RS22440 () | 68593..68940 | + | 348 | WP_005176480.1 | Yop proteins translocation protein I | VF |
| BED34_RS22445 () | 68947..69681 | + | 735 | WP_005176483.1 | Yop proteins translocation lipoprotein J | VF |
| BED34_RS22450 () | 69681..70310 | + | 630 | WP_057618913.1 | Yop proteins translocation protein K | VF |
| BED34_RS22455 () | 70256..70927 | + | 672 | WP_080478656.1 | Yop proteins translocation protein L | VF |
| BED34_RS22460 () | 71127..71474 | + | 348 | WP_050293994.1 | Yop proteins translocation protein M | VF |
| BED34_RS22465 () | 72158..73564 | + | 1407 | WP_069009740.1 | Tyrosine-protein phosphatase YopH | VF |
| BED34_RS22470 () | 73792..74217 | - | 426 | WP_010891235.1 | hypothetical protein | VF |
| BED34_RS23965 () | 74421..75593 | - | 1173 | Protein_92 | IS3 family transposase | - |
| BED34_RS22485 () | 75828..76220 | - | 393 | WP_010891236.1 | YopE regulator | VF |
| BED34_RS22490 () | 76413..77072 | + | 660 | WP_072089396.1 | Outer membrane virulence protein YopE | VF |
| BED34_RS22495 () | 77213..77512 | - | 300 | WP_014609469.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BED34_RS22500 () | 77505..77747 | - | 243 | WP_005176524.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| BED34_RS23970 () | 77913..78205 | - | 293 | Protein_97 | IS6 family transposase ISEas1 | Transposase |
| BED34_RS22505 () | 78585..79550 | - | 966 | WP_050294053.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| BED34_RS22510 () | 79547..80713 | - | 1167 | WP_010891239.1 | Sporulation initiation inhibitor protein Soj | VF |
| BED34_RS22515 () | 81155..81625 | + | 471 | WP_010891240.1 | IS481 family transposase ISAzs36 | Transposase |
| BED34_RS22520 () | 81686..81904 | - | 219 | WP_013749479.1 | hypothetical protein | - |
| BED34_RS22525 () | 82217..83276 | + | 1060 | Protein_102 | IS3 family transposase ISYal1 | Transposase |
| BED34_RS22530 () | 83436..83786 | + | 351 | WP_016266427.1 | Yop proteins translocation protein M | VF |
| BED34_RS22535 () | 83959..84792 | + | 834 | Protein_104 | Tn3 family transposase TnpA_Tn3 | Transposase |
| BED34_RS23975 () | 84888..85449 | - | 562 | Protein_105 | transposase family protein | - |
| BED34_RS24580 () | 86044..87461 | + | 1418 | Protein_106 | Adhesin YadA | VF |
| BED34_RS22550 () | 87537..88387 | + | 851 | Protein_107 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|