MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 100154 bp
Accession: NZ_CP016610 Location: 1359018..1459171 Organism: Xylella fastidiosa strain Salento-2 Replicon: chromosome
Accession: NZ_CP016610 Location: 1359018..1459171 Organism: Xylella fastidiosa strain Salento-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BC375_RS06750 (BC375_06290) | 1355090..1355899 | + | 810 | WP_046419714.1 | DUF481 domain-containing protein | - |
| BC375_RS06755 (BC375_06295) | 1355953..1356870 | - | 918 | WP_046419711.1 | hydroxymethylbilane synthase | - |
| BC375_RS06760 (BC375_06300) | 1356887..1357645 | - | 759 | WP_010894122.1 | LytTR family DNA-binding domain-containing protein | - |
| BC375_RS06765 (BC375_06305) | 1357671..1358669 | - | 999 | WP_004084959.1 | sensor histidine kinase | - |
| BC375_RS06770 (BC375_06310) | 1358725..1359399 | - | 675 | WP_046419709.1 | alpha/beta hydrolase | - |
| BC375_RS06775 (BC375_06315) | 1359428..1361332 | - | 1905 | WP_046419909.1 | glucans biosynthesis glucosyltransferase MdoH | - |
| BC375_RS06780 (BC375_06320) | 1362862..1364193 | + | 1332 | WP_232755965.1 | serine hydrolase domain-containing protein | - |
| BC375_RS06785 (BC375_06325) | 1364313..1365167 | - | 855 | WP_046419704.1 | hypothetical protein | - |
| BC375_RS06790 (BC375_06330) | 1366427..1367356 | + | 930 | WP_010894113.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| BC375_RS13215 | 1367647..1367772 | + | 126 | WP_010894111.1 | hypothetical protein | - |
| BC375_RS06805 (BC375_06345) | 1368493..1369977 | + | 1485 | WP_053014141.1 | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | - |
| BC375_RS06810 (BC375_06350) | 1370355..1371560 | - | 1206 | WP_046419701.1 | AGE family epimerase/isomerase | - |
| BC375_RS06815 (BC375_06355) | 1371557..1372501 | - | 945 | WP_053014140.1 | carbohydrate kinase | - |
| BC375_RS06820 (BC375_06360) | 1372570..1373850 | - | 1281 | WP_046419696.1 | Long-chain-fatty-acid--CoA ligase FadD15 | VF |
| BC375_RS06825 (BC375_06365) | 1374720..1375355 | - | 636 | WP_046419693.1 | DUF2058 domain-containing protein | - |
| BC375_RS06830 (BC375_06370) | 1375401..1375637 | - | 237 | WP_046419691.1 | SlyX family protein | - |
| BC375_RS06835 (BC375_06375) | 1375630..1376982 | - | 1353 | WP_046419690.1 | Glycine betaine/choline transport system permease protein OusW | VF |
| BC375_RS06840 (BC375_06380) | 1377007..1377963 | - | 957 | WP_023906638.1 | Glycine betaine/proline betaine transport system ATP-binding protein ProV | VF |
| BC375_RS06845 (BC375_06385) | 1378605..1379183 | - | 579 | WP_046419686.1 | glutathione peroxidase | - |
| BC375_RS12350 | 1379549..1379710 | - | 162 | WP_010894100.1 | hypothetical protein | - |
| BC375_RS06855 (BC375_06395) | 1379929..1380804 | + | 876 | WP_023906641.1 | ABC transporter ATP-binding protein | - |
| BC375_RS06860 (BC375_06400) | 1380801..1381778 | + | 978 | WP_046419683.1 | hypothetical protein | - |
| BC375_RS06865 (BC375_06405) | 1382020..1382466 | + | 447 | WP_031336674.1 | hypothetical protein | - |
| BC375_RS12840 (BC375_06410) | 1382570..1382800 | - | 231 | WP_010894096.1 | hypothetical protein | - |
| BC375_RS12845 | 1382782..1382964 | - | 183 | WP_010894095.1 | baseplate J/gp47 family protein | - |
| BC375_RS06875 (BC375_06415) | 1383067..1383363 | + | 297 | WP_046419679.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BC375_RS06880 (BC375_06420) | 1383366..1383659 | + | 294 | WP_004085592.1 | putative addiction module antidote protein | Antitoxin Detail |
| BC375_RS06885 (BC375_06425) | 1383715..1384068 | - | 354 | WP_046419676.1 | hypothetical protein | - |
| BC375_RS06890 (BC375_06430) | 1384065..1384457 | - | 393 | WP_230950027.1 | Gp138 family membrane-puncturing spike protein | - |
| BC375_RS06895 (BC375_06435) | 1384983..1385999 | + | 1017 | WP_060870179.1 | Cytochrome c551 peroxidase | VF |
| BC375_RS06900 (BC375_06440) | 1385986..1386360 | + | 375 | WP_060870180.1 | hypothetical protein | - |
| BC375_RS06905 (BC375_06445) | 1386441..1386656 | + | 216 | WP_230949859.1 | helix-turn-helix domain-containing protein | - |
| BC375_RS06910 (BC375_06450) | 1386703..1387194 | + | 492 | WP_230951054.1 | DUF4065 domain-containing protein | - |
| BC375_RS06915 (BC375_06455) | 1387197..1387421 | + | 225 | WP_230949856.1 | hypothetical protein | - |
| BC375_RS06920 (BC375_06460) | 1387422..1388585 | - | 1164 | WP_046419971.1 | tail fiber protein | - |
| BC375_RS06925 (BC375_06465) | 1388589..1389149 | - | 561 | WP_046419969.1 | DUF2612 domain-containing protein | - |
| BC375_RS06930 (BC375_06470) | 1389146..1390291 | - | 1146 | WP_046419967.1 | baseplate J/gp47 family protein | - |
| BC375_RS06935 (BC375_06475) | 1390394..1390690 | + | 297 | WP_004085590.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BC375_RS06940 (BC375_06480) | 1390693..1390986 | + | 294 | WP_004085592.1 | putative addiction module antidote protein | Antitoxin Detail |
| BC375_RS06945 (BC375_06485) | 1391042..1391395 | - | 354 | WP_046419963.1 | hypothetical protein | - |
| BC375_RS06950 (BC375_06490) | 1391392..1392033 | - | 642 | WP_046419962.1 | Gp138 family membrane-puncturing spike protein | - |
| BC375_RS06955 (BC375_06495) | 1392030..1392860 | - | 831 | WP_046419672.1 | hypothetical protein | - |
| BC375_RS06960 (BC375_06500) | 1392857..1393174 | - | 318 | WP_046419669.1 | hypothetical protein | - |
| BC375_RS06965 (BC375_06505) | 1393174..1393944 | - | 771 | WP_046419667.1 | hypothetical protein | - |
| BC375_RS06970 (BC375_06510) | 1394352..1394609 | - | 258 | WP_046419904.1 | Blp family class II bacteriocin | - |
| BC375_RS06975 (BC375_06515) | 1394914..1396707 | - | 1794 | WP_234048980.1 | phage tail tape measure protein | - |
| BC375_RS12850 | 1396760..1396924 | - | 165 | WP_171817074.1 | hypothetical protein | - |
| BC375_RS12855 | 1396951..1397073 | - | 123 | Protein_1303 | hypothetical protein | - |
| BC375_RS12860 | 1397046..1397309 | - | 264 | WP_234048972.1 | putative phage tail assembly chaperone | - |
| BC375_RS06985 (BC375_06525) | 1397407..1397805 | - | 399 | WP_234048920.1 | DUF3277 family protein | - |
| BC375_RS13220 | 1397815..1398429 | - | 615 | WP_267893650.1 | DUF3383 family protein | - |
| BC375_RS13225 | 1398393..1399310 | - | 918 | WP_267893651.1 | DUF3383 family protein | - |
| BC375_RS06995 (BC375_06535) | 1399311..1399715 | - | 405 | WP_234048981.1 | hypothetical protein | - |
| BC375_RS07000 (BC375_06540) | 1399767..1400135 | - | 369 | WP_046419655.1 | hypothetical protein | - |
| BC375_RS12865 | 1400317..1400817 | - | 501 | WP_234049004.1 | DUF4054 domain-containing protein | - |
| BC375_RS12870 | 1400742..1400960 | - | 219 | WP_234049005.1 | DUF4054 domain-containing protein | - |
| BC375_RS07015 (BC375_06550) | 1401003..1401311 | - | 309 | WP_234048982.1 | hypothetical protein | - |
| BC375_RS12875 | 1401376..1401513 | - | 138 | WP_234048983.1 | DUF2184 domain-containing protein | - |
| BC375_RS07020 (BC375_06555) | 1401459..1402358 | - | 900 | WP_234048984.1 | DUF2184 domain-containing protein | - |
| BC375_RS07025 (BC375_06560) | 1402372..1402848 | - | 477 | WP_234048985.1 | hypothetical protein | - |
| BC375_RS12880 | 1402876..1403310 | - | 435 | WP_234048986.1 | hypothetical protein | - |
| BC375_RS12885 | 1403325..1403501 | - | 177 | WP_234048987.1 | hypothetical protein | - |
| BC375_RS12890 | 1403482..1403892 | - | 411 | WP_234048988.1 | DUF2213 domain-containing protein | - |
| BC375_RS12895 | 1403820..1404002 | - | 183 | WP_234048989.1 | DUF2213 domain-containing protein | - |
| BC375_RS07035 (BC375_06570) | 1404062..1404907 | - | 846 | WP_046419646.1 | phage head morphogenesis protein | - |
| BC375_RS07040 (BC375_06575) | 1404980..1405318 | + | 339 | WP_046419644.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BC375_RS07045 (BC375_06580) | 1405315..1405596 | + | 282 | WP_046419643.1 | helix-turn-helix domain-containing protein | - |
| BC375_RS07050 (BC375_06585) | 1405645..1407033 | - | 1389 | WP_171817071.1 | DUF1073 domain-containing protein | - |
| BC375_RS07055 (BC375_06590) | 1407030..1408580 | - | 1551 | WP_046419640.1 | phage terminase large subunit | - |
| BC375_RS07060 (BC375_06595) | 1408531..1408929 | - | 399 | WP_046419638.1 | hypothetical protein | - |
| BC375_RS07065 | 1409021..1409296 | - | 276 | WP_196484578.1 | hypothetical protein | - |
| BC375_RS07070 (BC375_06600) | 1409235..1409696 | - | 462 | WP_046419636.1 | hypothetical protein | - |
| BC375_RS07075 (BC375_06605) | 1409686..1410015 | - | 330 | WP_046419634.1 | phage holin family protein | - |
| BC375_RS07080 (BC375_06610) | 1410008..1410505 | - | 498 | WP_023907472.1 | lysozyme | - |
| BC375_RS07085 (BC375_06615) | 1410710..1411048 | - | 339 | WP_004085696.1 | BrnA antitoxin family protein | - |
| BC375_RS07090 (BC375_06620) | 1411035..1411301 | - | 267 | WP_010894061.1 | BrnT family toxin | - |
| BC375_RS07095 (BC375_06625) | 1411489..1412186 | - | 698 | Protein_1332 | hypothetical protein | - |
| BC375_RS07100 (BC375_06630) | 1412315..1412776 | - | 462 | WP_171817069.1 | hypothetical protein | - |
| BC375_RS07105 (BC375_06635) | 1412773..1413462 | - | 690 | WP_046419631.1 | hypothetical protein | - |
| BC375_RS07110 (BC375_06640) | 1413443..1414435 | - | 993 | WP_104993183.1 | YdaU family protein | - |
| BC375_RS07115 (BC375_06645) | 1414432..1414830 | - | 399 | Protein_1336 | hypothetical protein | - |
| BC375_RS12900 | 1414809..1414880 | + | 72 | Protein_1337 | single-stranded DNA-binding protein | - |
| BC375_RS07120 (BC375_06650) | 1414914..1415129 | + | 216 | WP_046419888.1 | DUF4224 domain-containing protein | - |
| BC375_RS07125 (BC375_06655) | 1415129..1416148 | + | 1020 | WP_046419629.1 | Yop proteins translocation protein O ; Integrase | Integrase |
| BC375_RS07130 (BC375_06660) | 1416293..1417702 | - | 1410 | WP_046419886.1 | class II fumarate hydratase | - |
| BC375_RS07135 (BC375_06665) | 1417807..1417947 | - | 141 | WP_155641460.1 | hypothetical protein | - |
| BC375_RS07140 (BC375_06670) | 1418291..1419658 | + | 1368 | WP_046419626.1 | adenylosuccinate lyase | - |
| BC375_RS07145 (BC375_06675) | 1419829..1421097 | + | 1269 | WP_046419624.1 | cupin domain-containing protein | - |
| BC375_RS07150 (BC375_06680) | 1422292..1425120 | + | 2829 | WP_046419622.1 | 2-oxoglutarate dehydrogenase E1 component | - |
| BC375_RS07155 (BC375_06685) | 1425162..1426337 | + | 1176 | WP_046419619.1 | dihydrolipoyllysine-residue succinyltransferase | - |
| BC375_RS07160 (BC375_06690) | 1426353..1426781 | + | 429 | WP_023906676.1 | hypothetical protein | - |
| BC375_RS07165 (BC375_06695) | 1426774..1428210 | + | 1437 | WP_031337879.1 | dihydrolipoyl dehydrogenase | - |
| BC375_RS07170 (BC375_06700) | 1429385..1429846 | - | 462 | WP_046419616.1 | glycine zipper 2TM domain-containing protein | - |
| BC375_RS07175 (BC375_06705) | 1430561..1431391 | + | 831 | WP_010894044.1 | tRNA threonylcarbamoyladenosine dehydratase | - |
| BC375_RS12905 | 1431915..1432097 | + | 183 | WP_162009299.1 | hypothetical protein | - |
| BC375_RS07185 (BC375_06710) | 1432708..1433397 | - | 690 | WP_046419884.1 | cAMP-activated global transcriptional regulator CRP | - |
| BC375_RS07190 (BC375_06715) | 1433540..1434334 | + | 795 | WP_004083667.1 | adenosylmethionine decarboxylase | - |
| BC375_RS07195 (BC375_06720) | 1434502..1435155 | - | 654 | WP_046419882.1 | 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase | - |
| BC375_RS07200 (BC375_06725) | 1435376..1435804 | + | 429 | WP_010894037.1 | 50S ribosomal protein L13 | - |
| BC375_RS07205 (BC375_06730) | 1435809..1436201 | + | 393 | WP_046419612.1 | 30S ribosomal protein S9 | - |
| BC375_RS07210 (BC375_06735) | 1436419..1437708 | - | 1290 | WP_010894035.1 | citrate synthase | - |
| BC375_RS07215 (BC375_06740) | 1437936..1438178 | - | 243 | WP_004083672.1 | type B 50S ribosomal protein L31 | - |
| BC375_RS07220 (BC375_06745) | 1438495..1439184 | - | 690 | WP_046419608.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| BC375_RS07225 (BC375_06750) | 1439310..1440245 | - | 936 | WP_031336710.1 | 2-methylisocitrate lyase | VF |
| BC375_RS07230 (BC375_06755) | 1440350..1441945 | - | 1596 | WP_046419606.1 | 2-methylcitrate synthase | VF |
| BC375_RS07235 (BC375_06760) | 1442143..1442703 | - | 561 | WP_020852892.1 | alkyl hydroperoxide reductase subunit C | - |
| BC375_RS07240 (BC375_06765) | 1443082..1447530 | - | 4449 | WP_232755944.1 | YadA-like family protein | - |
| BC375_RS07250 (BC375_06770) | 1448717..1451044 | - | 2328 | WP_046419602.1 | type II secretion system secretin GspD | - |
| BC375_RS07255 (BC375_06775) | 1451089..1451856 | - | 768 | WP_010894027.1 | hypothetical protein | - |
| BC375_RS07260 (BC375_06780) | 1451846..1452478 | - | 633 | WP_046419599.1 | type II secretion system protein GspM | - |
| BC375_RS07265 (BC375_06785) | 1452459..1453589 | - | 1131 | WP_046419596.1 | PilN domain-containing protein | - |
| BC375_RS07270 (BC375_06790) | 1453586..1454431 | - | 846 | WP_010894024.1 | 7-cyano-7-deazaguanine synthase | VF |
| BC375_RS07275 (BC375_06795) | 1454431..1455057 | - | 627 | WP_010894023.1 | type II secretion system protein J | - |
| BC375_RS07280 (BC375_06800) | 1455054..1455452 | - | 399 | WP_010894022.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| BC375_RS07285 (BC375_06805) | 1455449..1455955 | - | 507 | WP_010894021.1 | Tfp pilus assembly protein FimT/FimU | - |
| BC375_RS07290 (BC375_06810) | 1455961..1456395 | - | 435 | WP_004083686.1 | Outer membrane efflux protein BepC | VF |
| BC375_RS07295 (BC375_06815) | 1456612..1457829 | - | 1218 | WP_010894019.1 | Alginate lyase 7 | VF |
| BC375_RS07300 (BC375_06820) | 1457865..1459565 | - | 1701 | WP_046419592.1 | type II secretion system ATPase GspE | - |
| BC375_RS07305 (BC375_06825) | 1459857..1462850 | - | 2994 | WP_046419589.1 | YadA-like family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|