MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 100147 bp
Accession: NZ_CP016608 Location: 1358881..1459027 Organism: Xylella fastidiosa strain Salento-1 Replicon: chromosome
Accession: NZ_CP016608 Location: 1358881..1459027 Organism: Xylella fastidiosa strain Salento-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCV75_RS06725 (BCV75_06225) | 1354953..1355762 | + | 810 | WP_046419714.1 | DUF481 domain-containing protein | - |
| BCV75_RS06730 (BCV75_06230) | 1355816..1356733 | - | 918 | WP_046419711.1 | hydroxymethylbilane synthase | - |
| BCV75_RS06735 (BCV75_06235) | 1356750..1357508 | - | 759 | WP_010894122.1 | LytTR family DNA-binding domain-containing protein | - |
| BCV75_RS06740 (BCV75_06240) | 1357534..1358532 | - | 999 | WP_004084959.1 | sensor histidine kinase | - |
| BCV75_RS06745 (BCV75_06245) | 1358588..1359262 | - | 675 | WP_046419709.1 | alpha/beta hydrolase | - |
| BCV75_RS06750 (BCV75_06250) | 1359291..1361195 | - | 1905 | WP_046419909.1 | glucans biosynthesis glucosyltransferase MdoH | - |
| BCV75_RS06755 (BCV75_06255) | 1362725..1364056 | + | 1332 | WP_232755965.1 | serine hydrolase domain-containing protein | - |
| BCV75_RS06760 (BCV75_06260) | 1364176..1365030 | - | 855 | WP_046419704.1 | hypothetical protein | - |
| BCV75_RS06765 (BCV75_06265) | 1366290..1367219 | + | 930 | WP_010894113.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| BCV75_RS13235 | 1367510..1367635 | + | 126 | WP_010894111.1 | hypothetical protein | - |
| BCV75_RS06780 (BCV75_06280) | 1368356..1369840 | + | 1485 | WP_053014141.1 | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | - |
| BCV75_RS06785 (BCV75_06285) | 1370218..1371423 | - | 1206 | WP_046419701.1 | AGE family epimerase/isomerase | - |
| BCV75_RS06790 (BCV75_06290) | 1371420..1372364 | - | 945 | WP_053014140.1 | carbohydrate kinase | - |
| BCV75_RS06795 (BCV75_06295) | 1372433..1373713 | - | 1281 | WP_046419696.1 | L-fucose-proton symporter | VF |
| BCV75_RS06800 (BCV75_06300) | 1374583..1375218 | - | 636 | WP_046419693.1 | DUF2058 domain-containing protein | - |
| BCV75_RS06805 (BCV75_06305) | 1375264..1375500 | - | 237 | WP_046419691.1 | SlyX family protein | - |
| BCV75_RS06810 (BCV75_06310) | 1375493..1376845 | - | 1353 | WP_046419690.1 | UDP-glucose 6-dehydrogenase TuaD | VF |
| BCV75_RS06815 (BCV75_06315) | 1376869..1377813 | - | 945 | WP_234048971.1 | putative FKBP-type peptidyl-prolyl cis-trans isomerase FkpA | VF |
| BCV75_RS12850 | 1377725..1377922 | - | 198 | WP_234048977.1 | putative FKBP-type peptidyl-prolyl cis-trans isomerase FkpA | VF |
| BCV75_RS06820 (BCV75_06320) | 1378467..1379045 | - | 579 | WP_046419686.1 | glutathione peroxidase | - |
| BCV75_RS12340 | 1379411..1379572 | - | 162 | WP_010894100.1 | hypothetical protein | - |
| BCV75_RS06830 (BCV75_06330) | 1379791..1380666 | + | 876 | WP_023906641.1 | ABC transporter ATP-binding protein | - |
| BCV75_RS06835 (BCV75_06335) | 1380663..1381640 | + | 978 | WP_046419683.1 | hypothetical protein | - |
| BCV75_RS06840 (BCV75_06340) | 1381882..1382328 | + | 447 | WP_031336674.1 | hypothetical protein | - |
| BCV75_RS12855 (BCV75_06345) | 1382432..1382662 | - | 231 | WP_010894096.1 | hypothetical protein | - |
| BCV75_RS12860 | 1382644..1382826 | - | 183 | WP_010894095.1 | baseplate J/gp47 family protein | - |
| BCV75_RS06850 (BCV75_06350) | 1382929..1383225 | + | 297 | WP_046419679.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BCV75_RS06855 (BCV75_06355) | 1383228..1383521 | + | 294 | WP_004085592.1 | putative addiction module antidote protein | Antitoxin Detail |
| BCV75_RS06860 (BCV75_06360) | 1383577..1383930 | - | 354 | WP_046419676.1 | hypothetical protein | - |
| BCV75_RS06865 (BCV75_06365) | 1383927..1384319 | - | 393 | WP_230950027.1 | Gp138 family membrane-puncturing spike protein | - |
| BCV75_RS06870 (BCV75_06370) | 1384845..1385861 | + | 1017 | WP_060870179.1 | Protease PrtS | VF |
| BCV75_RS06875 (BCV75_06375) | 1385848..1386222 | + | 375 | WP_060870180.1 | hypothetical protein | - |
| BCV75_RS06880 (BCV75_06380) | 1386303..1386518 | + | 216 | WP_230949859.1 | helix-turn-helix domain-containing protein | - |
| BCV75_RS06885 (BCV75_06385) | 1386490..1387056 | + | 567 | WP_081089935.1 | DUF4065 domain-containing protein | - |
| BCV75_RS06890 (BCV75_06390) | 1387059..1387283 | + | 225 | WP_230949856.1 | hypothetical protein | - |
| BCV75_RS06895 (BCV75_06395) | 1387284..1388447 | - | 1164 | WP_046419971.1 | tail fiber protein | - |
| BCV75_RS06900 (BCV75_06400) | 1388451..1389011 | - | 561 | WP_046419969.1 | DUF2612 domain-containing protein | - |
| BCV75_RS06905 (BCV75_06405) | 1389008..1390153 | - | 1146 | WP_046419967.1 | baseplate J/gp47 family protein | - |
| BCV75_RS06910 (BCV75_06410) | 1390256..1390552 | + | 297 | WP_004085590.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BCV75_RS06915 (BCV75_06415) | 1390555..1390848 | + | 294 | WP_004085592.1 | putative addiction module antidote protein | Antitoxin Detail |
| BCV75_RS06920 (BCV75_06420) | 1390904..1391257 | - | 354 | WP_046419963.1 | hypothetical protein | - |
| BCV75_RS06925 (BCV75_06425) | 1391254..1391895 | - | 642 | WP_046419962.1 | Gp138 family membrane-puncturing spike protein | - |
| BCV75_RS06930 (BCV75_06430) | 1391892..1392722 | - | 831 | WP_046419672.1 | hypothetical protein | - |
| BCV75_RS06935 (BCV75_06435) | 1392719..1393036 | - | 318 | WP_046419669.1 | hypothetical protein | - |
| BCV75_RS12865 | 1393036..1393278 | - | 243 | WP_234048933.1 | hypothetical protein | - |
| BCV75_RS06940 (BCV75_06440) | 1393272..1393805 | - | 534 | WP_234048934.1 | hypothetical protein | - |
| BCV75_RS06945 (BCV75_06445) | 1394213..1394470 | - | 258 | WP_046419904.1 | Blp family class II bacteriocin | - |
| BCV75_RS06950 (BCV75_06450) | 1394775..1396664 | - | 1890 | WP_046419664.1 | hypothetical protein | - |
| BCV75_RS12870 | 1396621..1396785 | - | 165 | WP_171817074.1 | hypothetical protein | - |
| BCV75_RS12875 | 1396812..1396934 | - | 123 | Protein_1305 | hypothetical protein | - |
| BCV75_RS12880 | 1396907..1397170 | - | 264 | WP_234048972.1 | putative phage tail assembly chaperone | - |
| BCV75_RS06960 (BCV75_06460) | 1397230..1397667 | - | 438 | WP_004087249.1 | DUF3277 family protein | - |
| BCV75_RS06965 (BCV75_06465) | 1397677..1399173 | - | 1497 | WP_046419658.1 | DUF3383 domain-containing protein | - |
| BCV75_RS06970 (BCV75_06470) | 1399174..1399707 | - | 534 | WP_171817073.1 | hypothetical protein | - |
| BCV75_RS06975 (BCV75_06475) | 1399631..1399999 | - | 369 | WP_046419655.1 | hypothetical protein | - |
| BCV75_RS06980 (BCV75_06480) | 1399986..1400543 | - | 558 | WP_230949932.1 | hypothetical protein | - |
| BCV75_RS06985 (BCV75_06485) | 1400462..1400830 | - | 369 | WP_046419652.1 | DUF4054 domain-containing protein | - |
| BCV75_RS06990 (BCV75_06490) | 1400830..1401183 | - | 354 | WP_046419651.1 | hypothetical protein | - |
| BCV75_RS06995 (BCV75_06495) | 1401249..1402232 | - | 984 | WP_046419650.1 | DUF2184 domain-containing protein | - |
| BCV75_RS07000 (BCV75_06500) | 1402242..1402724 | - | 483 | WP_046419648.1 | hypothetical protein | - |
| BCV75_RS07005 (BCV75_06505) | 1402752..1403942 | - | 1191 | WP_046419647.1 | DUF2213 domain-containing protein | - |
| BCV75_RS07010 (BCV75_06510) | 1403942..1404787 | - | 846 | WP_046419646.1 | phage head morphogenesis protein | - |
| BCV75_RS07015 (BCV75_06515) | 1404860..1405198 | + | 339 | WP_046419644.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BCV75_RS07020 (BCV75_06520) | 1405195..1405476 | + | 282 | WP_046419643.1 | helix-turn-helix domain-containing protein | - |
| BCV75_RS07025 (BCV75_06525) | 1405525..1406913 | - | 1389 | WP_171817071.1 | DUF1073 domain-containing protein | - |
| BCV75_RS07030 (BCV75_06530) | 1406910..1408460 | - | 1551 | WP_046419640.1 | phage terminase large subunit | - |
| BCV75_RS07035 (BCV75_06535) | 1408411..1408809 | - | 399 | WP_046419638.1 | hypothetical protein | - |
| BCV75_RS07040 (BCV75_06540) | 1408901..1409176 | - | 276 | WP_196484578.1 | hypothetical protein | - |
| BCV75_RS07045 (BCV75_06545) | 1409115..1409576 | - | 462 | WP_046419636.1 | hypothetical protein | - |
| BCV75_RS07050 (BCV75_06550) | 1409566..1409895 | - | 330 | WP_046419634.1 | phage holin family protein | - |
| BCV75_RS07055 (BCV75_06555) | 1409888..1410385 | - | 498 | WP_023907472.1 | lysozyme | - |
| BCV75_RS07060 (BCV75_06560) | 1410590..1410928 | - | 339 | WP_004085696.1 | BrnA antitoxin family protein | - |
| BCV75_RS07065 (BCV75_06565) | 1410915..1411181 | - | 267 | WP_010894061.1 | BrnT family toxin | - |
| BCV75_RS07070 (BCV75_06570) | 1411369..1412067 | - | 699 | WP_046419632.1 | hypothetical protein | - |
| BCV75_RS07075 (BCV75_06575) | 1412196..1412657 | - | 462 | WP_171817069.1 | hypothetical protein | - |
| BCV75_RS07080 (BCV75_06580) | 1412654..1413343 | - | 690 | WP_046419631.1 | hypothetical protein | - |
| BCV75_RS07085 (BCV75_06585) | 1413324..1414316 | - | 993 | WP_104993183.1 | YdaU family protein | - |
| BCV75_RS07090 (BCV75_06590) | 1414313..1414711 | - | 399 | Protein_1333 | hypothetical protein | - |
| BCV75_RS12885 | 1414690..1414761 | + | 72 | Protein_1334 | single-stranded DNA-binding protein | - |
| BCV75_RS07095 (BCV75_06595) | 1414795..1415010 | + | 216 | WP_046419888.1 | DUF4224 domain-containing protein | - |
| BCV75_RS07100 (BCV75_06600) | 1415010..1416029 | + | 1020 | WP_046419629.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| BCV75_RS07105 (BCV75_06605) | 1416174..1417583 | - | 1410 | WP_046419886.1 | class II fumarate hydratase | - |
| BCV75_RS12345 | 1417688..1417828 | - | 141 | WP_155641460.1 | hypothetical protein | - |
| BCV75_RS07110 (BCV75_06610) | 1418148..1419515 | + | 1368 | WP_046419626.1 | adenylosuccinate lyase | - |
| BCV75_RS07115 (BCV75_06615) | 1419686..1420954 | + | 1269 | WP_046419624.1 | cupin domain-containing protein | - |
| BCV75_RS07120 (BCV75_06620) | 1422149..1424977 | + | 2829 | WP_046419622.1 | 2-oxoglutarate dehydrogenase E1 component | - |
| BCV75_RS07125 (BCV75_06625) | 1425019..1426194 | + | 1176 | WP_046419619.1 | dihydrolipoyllysine-residue succinyltransferase | - |
| BCV75_RS07130 (BCV75_06630) | 1426210..1426638 | + | 429 | WP_023906676.1 | hypothetical protein | - |
| BCV75_RS07135 (BCV75_06635) | 1426631..1428067 | + | 1437 | WP_031337879.1 | dihydrolipoyl dehydrogenase | - |
| BCV75_RS07140 (BCV75_06640) | 1429241..1429702 | - | 462 | WP_046419616.1 | glycine zipper 2TM domain-containing protein | - |
| BCV75_RS07145 (BCV75_06645) | 1430417..1431247 | + | 831 | WP_010894044.1 | tRNA threonylcarbamoyladenosine dehydratase | - |
| BCV75_RS12890 | 1431771..1431953 | + | 183 | WP_162009299.1 | hypothetical protein | - |
| BCV75_RS07155 (BCV75_06650) | 1432564..1433253 | - | 690 | WP_046419884.1 | cAMP-activated global transcriptional regulator CRP | - |
| BCV75_RS07160 (BCV75_06655) | 1433396..1434190 | + | 795 | WP_004083667.1 | adenosylmethionine decarboxylase | - |
| BCV75_RS07165 (BCV75_06660) | 1434358..1435011 | - | 654 | WP_046419882.1 | 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase | - |
| BCV75_RS07170 (BCV75_06665) | 1435232..1435660 | + | 429 | WP_010894037.1 | 50S ribosomal protein L13 | - |
| BCV75_RS07175 (BCV75_06670) | 1435665..1436057 | + | 393 | WP_046419612.1 | 30S ribosomal protein S9 | - |
| BCV75_RS07180 (BCV75_06675) | 1436275..1437564 | - | 1290 | WP_010894035.1 | citrate synthase | - |
| BCV75_RS07185 (BCV75_06680) | 1437792..1438034 | - | 243 | WP_004083672.1 | type B 50S ribosomal protein L31 | - |
| BCV75_RS07190 (BCV75_06685) | 1438351..1439040 | - | 690 | WP_046419608.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| BCV75_RS07195 (BCV75_06690) | 1439166..1440101 | - | 936 | WP_031336710.1 | Hydrogen peroxide-inducible genes activator | VF |
| BCV75_RS07200 (BCV75_06695) | 1440206..1441801 | - | 1596 | WP_046419606.1 | Alkyl hydroperoxide reductase subunit F | VF |
| BCV75_RS07205 (BCV75_06700) | 1441999..1442559 | - | 561 | WP_020852892.1 | alkyl hydroperoxide reductase subunit C | - |
| BCV75_RS07210 (BCV75_06705) | 1442938..1447386 | - | 4449 | WP_232755944.1 | YadA-like family protein | - |
| BCV75_RS07220 (BCV75_06710) | 1448573..1450900 | - | 2328 | WP_046419602.1 | type II secretion system secretin GspD | - |
| BCV75_RS07225 (BCV75_06715) | 1450945..1451712 | - | 768 | WP_010894027.1 | hypothetical protein | - |
| BCV75_RS07230 (BCV75_06720) | 1451702..1452334 | - | 633 | WP_046419599.1 | type II secretion system protein GspM | - |
| BCV75_RS07235 (BCV75_06725) | 1452315..1453445 | - | 1131 | WP_046419596.1 | PilN domain-containing protein | - |
| BCV75_RS07240 (BCV75_06730) | 1453442..1454287 | - | 846 | WP_010894024.1 | hypothetical protein | VF |
| BCV75_RS07245 (BCV75_06735) | 1454287..1454913 | - | 627 | WP_010894023.1 | type II secretion system protein J | - |
| BCV75_RS07250 (BCV75_06740) | 1454910..1455308 | - | 399 | WP_010894022.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| BCV75_RS07255 (BCV75_06745) | 1455305..1455811 | - | 507 | WP_010894021.1 | Tfp pilus assembly protein FimT/FimU | - |
| BCV75_RS07260 (BCV75_06750) | 1455817..1456251 | - | 435 | WP_004083686.1 | Type II secretion system protein G | VF |
| BCV75_RS07265 (BCV75_06755) | 1456468..1457685 | - | 1218 | WP_010894019.1 | Type II secretion system protein F | VF |
| BCV75_RS07270 (BCV75_06760) | 1457721..1459421 | - | 1701 | WP_046419592.1 | type II secretion system ATPase GspE | - |
| BCV75_RS07275 (BCV75_06765) | 1459713..1462706 | - | 2994 | WP_046419589.1 | YadA-like family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|