MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 49737 bp
Accession: NZ_CP016454 Location: 1..49737 Organism: Sphingobium sp. RAC03 Replicon: plasmid pBSY17_4
Accession: NZ_CP016454 Location: 1..49737 Organism: Sphingobium sp. RAC03 Replicon: plasmid pBSY17_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSY17_RS04035 () | 476..1813 | - | 1338 | WP_048575154.1 | M1 family metallopeptidase | - |
| BSY17_RS04040 () | 1891..2487 | - | 597 | WP_048575153.1 | Tn3 family transposase ISPsy39 | Transposase |
| BSY17_RS04045 () | 2636..4117 | + | 1482 | WP_053085608.1 | DDE-type integrase/transposase/recombinase | - |
| BSY17_RS04050 () | 4117..4749 | + | 633 | WP_083217027.1 | ATP-binding protein | - |
| BSY17_RS04055 () | 4833..5600 | - | 768 | WP_063142326.1 | IS21 family transposase ISSsp5 | Transposase |
| BSY17_RS04060 () | 5597..7090 | - | 1494 | WP_011950768.1 | IS21 family transposase ISSsp5 | Transposase |
| BSY17_RS04065 () | 7136..7822 | + | 687 | WP_171899179.1 | glutathione S-transferase family protein | - |
| BSY17_RS21145 () | 7858..7962 | + | 105 | Protein_8 | alpha/beta hydrolase | - |
| BSY17_RS04070 () | 8314..9543 | - | 1230 | WP_069064527.1 | FAD-dependent oxidoreductase | - |
| BSY17_RS04075 () | 9836..12142 | - | 2307 | WP_069064528.1 | TonB-dependent receptor | - |
| BSY17_RS04080 () | 12502..13686 | + | 1185 | WP_137903378.1 | alpha/beta fold hydrolase | - |
| BSY17_RS04085 () | 13775..14926 | - | 1152 | WP_069064529.1 | Esterase EstB | VF |
| BSY17_RS04090 () | 15184..15732 | - | 549 | WP_052182396.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| BSY17_RS04095 () | 16090..16701 | + | 612 | WP_081095404.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| BSY17_RS04100 () | 16830..17723 | - | 894 | WP_069064530.1 | ABC transporter substrate-binding protein | - |
| BSY17_RS04105 () | 17723..18589 | - | 867 | WP_062344525.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| BSY17_RS04110 () | 18589..19917 | - | 1329 | WP_062344527.1 | Rieske 2Fe-2S domain-containing protein | - |
| BSY17_RS04115 () | 20065..21255 | + | 1191 | WP_062344530.1 | Putative 4,5-dihydroxyphthalate dehydrogenase | VF |
| BSY17_RS04120 () | 21252..22244 | + | 993 | WP_069064531.1 | PhnD/SsuA/transferrin family substrate-binding protein | - |
| BSY17_RS04125 () | 22373..22984 | - | 612 | WP_081095404.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| BSY17_RS04130 () | 23342..23890 | + | 549 | WP_052182396.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| BSY17_RS04135 () | 24148..25299 | + | 1152 | WP_069064529.1 | Esterase EstB | VF |
| BSY17_RS04140 () | 25388..26572 | - | 1185 | WP_137903378.1 | alpha/beta fold hydrolase | - |
| BSY17_RS04145 () | 26809..29823 | - | 3015 | WP_037555775.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| BSY17_RS04150 () | 29955..30515 | + | 561 | WP_011950653.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| BSY17_RS04155 () | 30510..31577 | - | 1068 | WP_011950654.1 | TolC family protein | - |
| BSY17_RS04160 () | 31635..31967 | - | 333 | WP_011950386.1 | hypothetical protein | - |
| BSY17_RS04165 () | 32259..32621 | + | 363 | WP_041380198.1 | hypothetical protein | - |
| BSY17_RS04170 () | 32659..33054 | + | 396 | WP_041380118.1 | CopG family transcriptional regulator | - |
| BSY17_RS04175 () | 33051..34013 | + | 963 | WP_041380120.1 | tyrosine-type recombinase/integrase | - |
| BSY17_RS04180 () | 34010..34630 | - | 621 | WP_019086510.1 | histidine phosphatase family protein | - |
| BSY17_RS04185 () | 34640..34921 | - | 282 | WP_004212931.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| BSY17_RS04190 () | 34908..35174 | - | 267 | WP_011950390.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BSY17_RS04195 () | 35593..36222 | + | 630 | WP_011950391.1 | transcription elongation protein SprT | - |
| BSY17_RS04200 () | 36305..36958 | + | 654 | WP_011950392.1 | Sporulation initiation inhibitor protein Soj | VF |
| BSY17_RS04205 () | 36955..37269 | + | 315 | WP_011950393.1 | hypothetical protein | - |
| BSY17_RS04215 () | 37833..38699 | - | 867 | WP_006953933.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| BSY17_RS04220 () | 38842..41751 | - | 2910 | WP_048938210.1 | Tn3 family transposase TnpA_ISYps3 | Transposase |
| BSY17_RS04225 () | 41917..42582 | + | 666 | WP_066771020.1 | hypothetical protein | - |
| BSY17_RS04230 () | 42587..42877 | - | 291 | WP_066609359.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BSY17_RS04235 () | 42870..43115 | - | 246 | WP_066609365.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| BSY17_RS04240 () | 43179..44228 | - | 1050 | WP_083217029.1 | Mobilization protein A | Relaxase |
| BSY17_RS04245 () | 44451..44720 | + | 270 | WP_069064532.1 | mobilization protein | - |
| BSY17_RS04250 () | 44720..45571 | + | 852 | WP_066771028.1 | hypothetical protein | - |
| BSY17_RS04255 () | 45568..45864 | + | 297 | WP_083217030.1 | hypothetical protein | - |
| BSY17_RS04260 () | 46293..47360 | + | 1068 | WP_083217031.1 | replication initiation protein | - |
| BSY17_RS04265 () | 47439..47873 | + | 435 | WP_037531041.1 | hypothetical protein | - |
| BSY17_RS21475 () | 47883..48059 | - | 177 | WP_156521894.1 | hypothetical protein | - |
| BSY17_RS04270 () | 48159..49511 | - | 1353 | WP_066769679.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|