MGE detailed information
MGE type: Integron MGE length: 45686 bp
Accession: NZ_CP016308 Location: 1121237..1166922 Organism: Vibrio scophthalmi strain VS-12 Replicon: chromosome
Accession: NZ_CP016308 Location: 1121237..1166922 Organism: Vibrio scophthalmi strain VS-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VSVS12_RS19760 () | 1116257..1117465 | - | 1209 | WP_032073033.1 | IS4 family transposase | - |
| VSVS12_RS19765 () | 1117606..1118814 | - | 1209 | WP_032073033.1 | IS4 family transposase | - |
| VSVS12_RS19770 () | 1118854..1119054 | - | 201 | WP_065431822.1 | hypothetical protein | - |
| VSVS12_RS19775 () | 1119287..1119910 | - | 624 | Protein_979 | hypothetical protein | - |
| VSVS12_RS19780 () | 1119925..1121133 | - | 1209 | WP_032073033.1 | IS4 family transposase | - |
| VSVS12_RS19785 () | 1122119..1122445 | - | 327 | WP_065432082.1 | hypothetical protein | - |
| VSVS12_RS23290 () | 1123297..1123470 | + | 174 | WP_197498419.1 | hypothetical protein | - |
| VSVS12_RS19790 () | 1123732..1124259 | - | 528 | Protein_983 | hypothetical protein | - |
| VSVS12_RS19795 () | 1124541..1124804 | + | 264 | WP_065431823.1 | DUF1496 domain-containing protein | - |
| VSVS12_RS19800 () | 1125595..1126248 | - | 654 | WP_065431824.1 | hypothetical protein | - |
| VSVS12_RS23295 () | 1126494..1126637 | + | 144 | WP_197498420.1 | hypothetical protein | - |
| VSVS12_RS19805 () | 1126987..1127340 | - | 354 | WP_065432083.1 | hypothetical protein | - |
| VSVS12_RS19810 () | 1127501..1128007 | - | 507 | WP_065431825.1 | GNAT family N-acetyltransferase | - |
| VSVS12_RS19815 () | 1129166..1129585 | - | 420 | WP_065431826.1 | TIR domain-containing protein | - |
| VSVS12_RS19820 () | 1129585..1130046 | - | 462 | WP_065431827.1 | hypothetical protein | - |
| VSVS12_RS19825 () | 1130252..1130500 | - | 249 | WP_065431828.1 | hypothetical protein | - |
| VSVS12_RS19830 () | 1130727..1131050 | - | 324 | WP_065431829.1 | hypothetical protein | - |
| VSVS12_RS19835 () | 1131225..1131926 | - | 702 | WP_065431830.1 | hypothetical protein | - |
| VSVS12_RS19840 () | 1132726..1133220 | - | 495 | WP_083181539.1 | hypothetical protein | - |
| VSVS12_RS22815 () | 1133826..1133918 | - | 93 | WP_075111373.1 | DUF3265 domain-containing protein | - |
| VSVS12_RS19845 () | 1134075..1134293 | + | 219 | WP_038896800.1 | hypothetical protein | - |
| VSVS12_RS23300 () | 1134989..1135153 | - | 165 | WP_197498421.1 | hypothetical protein | - |
| VSVS12_RS19855 () | 1135216..1135491 | - | 276 | WP_197498452.1 | VanZ family protein | - |
| VSVS12_RS19860 () | 1135720..1136220 | - | 501 | WP_083181543.1 | GNAT family N-acetyltransferase | - |
| VSVS12_RS19865 () | 1136469..1136747 | + | 279 | WP_065431833.1 | hypothetical protein | - |
| VSVS12_RS19870 () | 1136912..1137199 | - | 288 | WP_065431834.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VSVS12_RS19875 () | 1137199..1137477 | - | 279 | WP_065431835.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VSVS12_RS23105 () | 1137817..1137987 | + | 171 | WP_156773193.1 | hypothetical protein | - |
| VSVS12_RS19880 () | 1138256..1138675 | - | 420 | WP_065431836.1 | DUF2513 domain-containing protein | - |
| VSVS12_RS19885 () | 1139381..1139770 | - | 390 | WP_156773194.1 | hypothetical protein | - |
| VSVS12_RS23305 () | 1140021..1140188 | + | 168 | WP_197498422.1 | hypothetical protein | - |
| VSVS12_RS22830 () | 1140348..1140440 | - | 93 | WP_197498423.1 | DUF3265 domain-containing protein | - |
| VSVS12_RS19890 () | 1140465..1140656 | - | 192 | WP_065431838.1 | hypothetical protein | - |
| VSVS12_RS19895 () | 1140833..1141249 | - | 417 | WP_065431839.1 | hypothetical protein | - |
| VSVS12_RS19900 () | 1141425..1141772 | - | 348 | WP_060467711.1 | DUF3024 domain-containing protein | - |
| VSVS12_RS19905 () | 1141972..1142481 | - | 510 | WP_065431840.1 | hypothetical protein | VF |
| VSVS12_RS19910 () | 1143789..1144064 | - | 276 | WP_065431841.1 | hypothetical protein | - |
| VSVS12_RS19915 () | 1144345..1144623 | - | 279 | WP_025573065.1 | hypothetical protein | - |
| VSVS12_RS19920 () | 1144785..1145189 | - | 405 | WP_065431842.1 | DUF1801 domain-containing protein | - |
| VSVS12_RS19925 () | 1145383..1145724 | - | 342 | WP_065431843.1 | hypothetical protein | - |
| VSVS12_RS19930 () | 1145860..1146633 | - | 774 | WP_065431844.1 | aminoglycoside phosphotransferase family protein | - |
| VSVS12_RS19935 () | 1146770..1147429 | - | 660 | WP_065431845.1 | hypothetical protein | - |
| VSVS12_RS19940 () | 1147591..1147842 | - | 252 | WP_065431846.1 | hypothetical protein | - |
| VSVS12_RS19945 () | 1149254..1149556 | - | 303 | WP_065431847.1 | hypothetical protein | - |
| VSVS12_RS19950 () | 1150261..1150818 | - | 558 | WP_065431848.1 | hypothetical protein | - |
| VSVS12_RS23310 () | 1152150..1152317 | + | 168 | WP_197498424.1 | hypothetical protein | - |
| VSVS12_RS19955 () | 1152599..1152940 | - | 342 | WP_156773195.1 | hypothetical protein | - |
| VSVS12_RS19960 () | 1153091..1153618 | - | 528 | WP_065431850.1 | CbrC family protein | - |
| VSVS12_RS19965 () | 1153761..1154177 | - | 417 | WP_065431851.1 | hypothetical protein ; Integrase | Integrase |
| VSVS12_RS19975 () | 1154595..1154897 | - | 303 | WP_083181547.1 | hypothetical protein | - |
| VSVS12_RS19980 () | 1155071..1156279 | + | 1209 | WP_032073033.1 | IS4 family transposase IS10R | Transposase |
| VSVS12_RS19985 () | 1157109..1157357 | + | 249 | WP_065431854.1 | hypothetical protein | - |
| VSVS12_RS19990 () | 1158189..1158569 | - | 381 | WP_065431855.1 | GFA family protein | - |
| VSVS12_RS19995 () | 1159278..1159778 | - | 501 | WP_009387539.1 | GNAT family N-acetyltransferase | - |
| VSVS12_RS20000 () | 1159980..1160327 | - | 348 | WP_060467711.1 | DUF3024 domain-containing protein | - |
| VSVS12_RS20005 () | 1160534..1161169 | - | 636 | WP_065431856.1 | Chloramphenicol acetyltransferase | VF |
| VSVS12_RS20010 () | 1161285..1162493 | + | 1209 | WP_032073033.1 | IS4 family transposase IS10R | Transposase |
| VSVS12_RS20015 () | 1162769..1163620 | - | 852 | WP_065431857.1 | hypothetical protein | - |
| VSVS12_RS20020 () | 1163771..1164979 | - | 1209 | WP_032073033.1 | IS4 family transposase IS10R | Transposase |
| VSVS12_RS20025 () | 1165102..1165854 | - | 753 | WP_065431858.1 | hypothetical protein | - |
| VSVS12_RS20030 () | 1166009..1166356 | - | 348 | WP_060467711.1 | DUF3024 domain-containing protein | - |
| VSVS12_RS20035 () | 1166650..1166922 | + | 273 | WP_065431859.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| VSVS12_RS20040 () | 1166919..1167416 | + | 498 | WP_065431860.1 | GNAT family N-acetyltransferase | Toxin Detail |
| VSVS12_RS20045 () | 1167574..1168782 | - | 1209 | WP_032073033.1 | IS4 family transposase | - |
| VSVS12_RS20050 () | 1169331..1170317 | - | 987 | WP_065431861.1 | LacI family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|