MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 92201 bp
Accession: NZ_CP016175 Location: 809731..901931 Organism: Streptococcus suis strain LSM102 Replicon: chromosome
Accession: NZ_CP016175 Location: 809731..901931 Organism: Streptococcus suis strain LSM102 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9494_RS04040 () | 805029..805403 | + | 375 | WP_002934959.1 | DUF1149 family protein | - |
| A9494_RS04045 () | 805405..806256 | + | 852 | WP_011922353.1 | DegV family protein | - |
| A9494_RS04050 () | 806265..807032 | + | 768 | WP_011922354.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| A9494_RS04055 () | 807029..808240 | + | 1212 | WP_011922355.1 | CCA tRNA nucleotidyltransferase | - |
| A9494_RS04060 () | 808233..810101 | + | 1869 | WP_012775435.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| A9494_RS04065 () | 810102..810437 | + | 336 | WP_002934966.1 | hypothetical protein | - |
| A9494_RS04070 () | 810533..811492 | + | 960 | WP_012775086.1 | ROK family glucokinase | - |
| A9494_RS04075 () | 811618..811896 | + | 279 | WP_012775087.1 | hypothetical protein | - |
| A9494_RS04080 () | 811908..812210 | + | 303 | WP_012775088.1 | hypothetical protein | - |
| A9494_RS04085 () | 812263..813102 | + | 840 | WP_011922359.1 | thymidylate synthase | - |
| A9494_RS04090 () | 813388..813900 | + | 513 | WP_011922360.1 | dihydrofolate reductase | - |
| A9494_RS04100 () | 814098..815324 | + | 1227 | WP_002934974.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
| A9494_RS04105 () | 815380..815967 | + | 588 | WP_012775089.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| A9494_RS04110 () | 815990..816403 | + | 414 | WP_012028095.1 | nucleoside-diphosphate kinase | - |
| A9494_RS04115 () | 816507..817178 | + | 672 | WP_011922364.1 | HIRAN domain-containing protein | - |
| A9494_RS04120 () | 817460..819292 | + | 1833 | WP_002943192.1 | translation elongation factor 4 | - |
| A9494_RS04125 () | 819342..819524 | - | 183 | WP_002934978.1 | 4-oxalocrotonate tautomerase | - |
| A9494_RS04130 () | 819659..820966 | + | 1308 | WP_012028097.1 | excalibur calcium-binding domain-containing protein | - |
| A9494_RS04140 () | 821351..821932 | + | 582 | WP_012028098.1 | thymidine kinase | - |
| A9494_RS04145 () | 822383..823462 | + | 1080 | WP_012775090.1 | peptide chain release factor 1 | - |
| A9494_RS04150 () | 823462..824295 | + | 834 | WP_011922371.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| A9494_RS04155 () | 824282..824890 | + | 609 | WP_011922372.1 | threonylcarbamoyl-AMP synthase | - |
| A9494_RS04160 () | 824887..825318 | + | 432 | WP_011922373.1 | GNAT family N-acetyltransferase | - |
| A9494_RS04165 () | 825342..826601 | + | 1260 | WP_011922374.1 | serine hydroxymethyltransferase | - |
| A9494_RS04170 () | 826601..827575 | + | 975 | WP_002943200.1 | nucleoid-associated protein | - |
| A9494_RS04175 () | 827576..828175 | + | 600 | WP_011922375.1 | lysozyme family protein | - |
| A9494_RS04180 () | 828276..829034 | + | 759 | WP_002943202.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| A9494_RS04185 () | 829051..829800 | + | 750 | WP_011922377.1 | translation initiation factor 1 | - |
| A9494_RS04190 () | 829822..830175 | + | 354 | WP_002943204.1 | HIRAN domain-containing protein | - |
| A9494_RS04195 () | 830196..831143 | - | 948 | WP_011922378.1 | hypothetical protein | - |
| A9494_RS04200 () | 831171..831959 | - | 789 | WP_012775093.1 | hypothetical protein | - |
| A9494_RS04205 () | 832155..833852 | + | 1698 | WP_012775094.1 | AAA family ATPase | - |
| A9494_RS04210 () | 833849..834898 | + | 1050 | WP_011922381.1 | 5-methylcytosine-specific restriction endonuclease system specificity protein McrC | - |
| A9494_RS04215 () | 835073..836623 | - | 1551 | WP_002934999.1 | glutamine-hydrolyzing GMP synthase | - |
| A9494_RS04220 () | 836899..837597 | + | 699 | WP_002943214.1 | GntR family transcriptional regulator | - |
| A9494_RS04225 () | 837700..838032 | + | 333 | WP_002935001.1 | putative DNA-binding protein | - |
| A9494_RS04230 () | 838045..839583 | + | 1539 | WP_011922394.1 | signal recognition particle protein | - |
| A9494_RS04235 () | 839777..840445 | + | 669 | WP_011922395.1 | SatD family protein | - |
| A9494_RS04240 () | 840449..841189 | + | 741 | WP_011922396.1 | DUF3307 domain-containing protein | - |
| A9494_RS04245 () | 841254..841691 | + | 438 | WP_087892715.1 | AAA family ATPase | - |
| A9494_RS04250 () | 842348..842653 | + | 306 | WP_015445217.1 | Abi family protein | - |
| A9494_RS04255 () | 842701..843309 | + | 609 | Protein_763 | Abi family protein | - |
| A9494_RS04260 () | 843668..844738 | + | 1071 | WP_012775101.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| A9494_RS04265 () | 844808..846316 | - | 1509 | WP_011922400.1 | hypothetical protein | VF |
| A9494_RS04270 () | 846392..847333 | - | 942 | WP_012775102.1 | sensor histidine kinase | - |
| A9494_RS04275 () | 847330..847995 | - | 666 | WP_012775103.1 | Chemotaxis response regulator protein-glutamate methylesterase | VF |
| A9494_RS04280 () | 848034..848291 | - | 258 | WP_011922404.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A9494_RS04285 () | 848275..848526 | - | 252 | WP_012775104.1 | hypothetical protein | Antitoxin Detail |
| A9494_RS04290 () | 848618..850588 | - | 1971 | WP_012775105.1 | FtsX-like permease family protein | - |
| A9494_RS04295 () | 850589..851341 | - | 753 | WP_011922409.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| A9494_RS04300 () | 851477..852211 | - | 735 | WP_011922410.1 | ABC transporter permease | - |
| A9494_RS04305 () | 852213..852959 | - | 747 | WP_011922411.1 | ABC transporter permease | - |
| A9494_RS04310 () | 852961..853863 | - | 903 | WP_011922412.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| A9494_RS04315 () | 853884..854261 | - | 378 | WP_011922413.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| A9494_RS04320 () | 854274..854414 | - | 141 | WP_012775106.1 | hypothetical protein | - |
| A9494_RS04325 () | 854554..855720 | - | 1167 | WP_011922414.1 | carbamoyl phosphate synthase large subunit | - |
| A9494_RS04330 () | 855738..856484 | - | 747 | WP_011922415.1 | esterase family protein | - |
| A9494_RS04335 () | 856515..857342 | - | 828 | WP_011922416.1 | alpha/beta hydrolase | - |
| A9494_RS04340 () | 857456..858460 | - | 1005 | WP_012775107.1 | winged helix DNA-binding domain-containing protein | - |
| A9494_RS04345 () | 858525..859361 | - | 837 | WP_014636394.1 | AraC family transcriptional regulator | - |
| A9494_RS04350 () | 859438..860772 | - | 1335 | WP_011922419.1 | methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO | - |
| A9494_RS04355 () | 860968..861717 | - | 750 | WP_011922420.1 | HAD family hydrolase | - |
| A9494_RS04360 () | 861902..863101 | - | 1200 | WP_012775621.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| A9494_RS04365 () | 863124..863351 | - | 228 | WP_012775620.1 | DUF3173 family protein | - |
| A9494_RS04370 () | 863630..863851 | - | 222 | WP_011922422.1 | helix-turn-helix transcriptional regulator | - |
| A9494_RS04375 () | 864181..865278 | - | 1098 | WP_012775619.1 | HAMP domain-containing histidine kinase | - |
| A9494_RS04380 () | 865263..865946 | - | 684 | WP_012775618.1 | Sensor histidine kinase RcsC | VF |
| A9494_RS04385 () | 865977..866684 | - | 708 | WP_012775617.1 | ABC transporter permease | - |
| A9494_RS04390 () | 866681..867472 | - | 792 | WP_043029019.1 | ABC transporter permease | - |
| A9494_RS04395 () | 867462..868178 | - | 717 | WP_011922427.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| A9494_RS04400 () | 868191..868853 | - | 663 | Protein_792 | Vitamin B12 import ATP-binding protein BtuD | VF |
| A9494_RS10450 () | 868887..869009 | - | 123 | WP_017370910.1 | hypothetical protein | - |
| A9494_RS04405 () | 869331..871196 | - | 1866 | WP_087892716.1 | relaxase/mobilization nuclease domain-containing protein | - |
| A9494_RS04410 () | 871183..871548 | - | 366 | WP_011922431.1 | MobC family plasmid mobilization relaxosome protein | - |
| A9494_RS04415 () | 871548..871913 | - | 366 | WP_012775113.1 | hypothetical protein | - |
| A9494_RS04420 () | 872278..873174 | + | 897 | WP_011922433.1 | ATP-binding protein | - |
| A9494_RS04425 () | 873296..874513 | - | 1218 | WP_001291561.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| A9494_RS04430 () | 874595..874798 | - | 204 | WP_000814511.1 | excisionase | - |
| A9494_RS04440 () | 875259..875489 | - | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| A9494_RS04445 () | 875486..875908 | - | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| A9494_RS04450 () | 876413..876766 | + | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| A9494_RS04455 () | 876826..876993 | - | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| A9494_RS04460 () | 877112..879031 | - | 1920 | WP_000691736.1 | Peptide chain release factor 3 | VF |
| A9494_RS04465 () | 879047..879163 | - | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| A9494_RS04470 () | 879408..880340 | - | 933 | WP_001224318.1 | conjugal transfer protein | - |
| A9494_RS04475 () | 880337..881338 | - | 1002 | WP_000769868.1 | hypothetical protein | VF |
| A9494_RS04480 () | 881335..883512 | - | 2178 | WP_000804748.1 | membrane protein | - |
| A9494_RS04485 () | 883515..885963 | - | 2449 | Protein_809 | ATP-binding protein | - |
| A9494_RS04490 () | 885947..886453 | - | 507 | WP_000506270.1 | conjugal transfer protein | - |
| A9494_RS04495 () | 886428..886925 | - | 498 | Protein_811 | antirestriction protein ArdA | - |
| A9494_RS04500 () | 887042..887263 | - | 222 | WP_001009056.1 | hypothetical protein | - |
| A9494_RS04505 () | 887306..888511 | - | 1206 | WP_000398284.1 | replication initiation factor domain-containing protein | - |
| A9494_RS04510 () | 888534..888686 | - | 153 | WP_000879507.1 | hypothetical protein | - |
| A9494_RS04515 () | 888689..890074 | - | 1386 | WP_000813488.1 | DNA translocase FtsK | - |
| A9494_RS04520 () | 890103..890489 | - | 387 | WP_000985015.1 | YdcP family protein | - |
| A9494_RS04525 () | 890505..890819 | - | 315 | WP_000420682.1 | YdcP family protein | - |
| A9494_RS04540 () | 891441..892802 | - | 1362 | Protein_818 | ATP-dependent helicase | - |
| A9494_RS04545 () | 892789..894876 | - | 2088 | WP_011922436.1 | AAA family ATPase | - |
| A9494_RS04550 () | 894873..895649 | - | 777 | WP_011922437.1 | zeta toxin family protein | Toxin Detail |
| A9494_RS04555 () | 895649..896125 | - | 477 | WP_012775115.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| A9494_RS04560 () | 896195..896485 | - | 291 | WP_024379089.1 | hypothetical protein | - |
| A9494_RS04565 () | 896535..896924 | - | 390 | WP_011922440.1 | methyl-accepting chemotaxis protein | - |
| A9494_RS04570 () | 896921..897148 | - | 228 | WP_011922441.1 | hypothetical protein | - |
| A9494_RS04575 () | 897202..898278 | - | 1077 | WP_011922442.1 | toprim domain-containing protein | - |
| A9494_RS04580 () | 898317..898955 | - | 639 | WP_011922443.1 | hypothetical protein | - |
| A9494_RS04585 () | 900356..900955 | - | 600 | WP_011922444.1 | response regulator transcription factor | - |
| A9494_RS04590 () | 900933..902441 | - | 1509 | WP_043041512.1 | ATP-binding protein | - |
| A9494_RS04595 () | 902445..903134 | - | 690 | WP_012775116.1 | ABC transporter permease | - |
| A9494_RS04600 () | 903144..903863 | - | 720 | WP_087892717.1 | ABC transporter permease | - |
| A9494_RS04605 () | 903841..904755 | - | 915 | WP_011922447.1 | ATP-binding cassette domain-containing protein | - |
| A9494_RS04610 () | 904727..906022 | - | 1296 | Protein_832 | ATP-binding cassette domain-containing protein | - |
| A9494_RS04615 () | 906327..906623 | - | 297 | WP_012775118.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|