MGE detailed information
MGE type: Prophage MGE length: 21707 bp
Accession: NZ_CP016018 Location: 2227145..2248851 Organism: Escherichia coli strain ER1821R Replicon: chromosome
Accession: NZ_CP016018 Location: 2227145..2248851 Organism: Escherichia coli strain ER1821R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9X67_RS10945 () | 2222396..2223106 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| A9X67_RS10950 () | 2223109..2223669 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| A9X67_RS10955 () | 2223704..2224045 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| A9X67_RS10960 () | 2224180..2224506 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| A9X67_RS10965 () | 2224712..2225926 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| A9X67_RS10970 () | 2225938..2226957 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| A9X67_RS24805 () | 2227015..2227125 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| A9X67_RS25275 () | 2227145..2228302 | - | 1158 | Protein_2095 | Tyrosine recombinase XerD ; Integrase | Integrase |
| A9X67_RS10980 () | 2228316..2229011 | - | 696 | Protein_2096 | IS3 family transposase IS2 | Transposase |
| A9X67_RS23510 () | 2229008..2229775 | - | 768 | Protein_2097 | exonuclease | - |
| A9X67_RS10990 () | 2229868..2230059 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| A9X67_RS10995 () | 2230056..2230244 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| A9X67_RS11005 () | 2230812..2231030 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| A9X67_RS11010 () | 2231190..2231345 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| A9X67_RS11015 () | 2231512..2231919 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| A9X67_RS11020 () | 2232003..2232233 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| A9X67_RS11025 () | 2232217..2232495 | + | 279 | Protein_2104 | hypothetical protein | - |
| A9X67_RS11030 () | 2232530..2232679 | + | 150 | WP_011443592.1 | hypothetical protein | - |
| A9X67_RS11035 () | 2233116..2233448 | - | 333 | WP_001301033.1 | protein FlxA | - |
| A9X67_RS23525 () | 2233651..2233956 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| A9X67_RS11040 () | 2233981..2234220 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| A9X67_RS11045 () | 2234220..2234507 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| A9X67_RS11050 () | 2234579..2234734 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| A9X67_RS11055 () | 2234951..2235202 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| A9X67_RS11060 () | 2235269..2235547 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| A9X67_RS11065 () | 2235549..2236598 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| A9X67_RS11070 () | 2236612..2237364 | + | 753 | WP_001047135.1 | antitermination protein | - |
| A9X67_RS25285 () | 2237642..2237731 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| A9X67_RS11075 () | 2237786..2237998 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| A9X67_RS11080 () | 2238299..2238514 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| A9X67_RS25780 () | 2238878..2239048 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| A9X67_RS11085 () | 2239268..2239483 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| A9X67_RS11090 () | 2239488..2239799 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| A9X67_RS11095 () | 2239796..2240329 | + | 534 | WP_001092971.1 | lysozyme | - |
| A9X67_RS11100 () | 2240326..2240823 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| A9X67_RS11105 () | 2241186..2241398 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| A9X67_RS23530 () | 2241409..2241597 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| A9X67_RS25290 () | 2241600..2241665 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| A9X67_RS11110 () | 2241744..2241899 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| A9X67_RS11115 () | 2242071..2242244 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| A9X67_RS11120 () | 2242396..2242806 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| A9X67_RS11125 () | 2242864..2243097 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| A9X67_RS11130 () | 2243486..2244055 | + | 570 | WP_000453612.1 | DNA-packaging protein | - |
| A9X67_RS11135 () | 2244006..2244968 | + | 963 | WP_001027733.1 | phage tail protein | - |
| A9X67_RS11140 () | 2244968..2245543 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| A9X67_RS11145 () | 2245641..2246231 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| A9X67_RS11150 () | 2246548..2246781 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| A9X67_RS25295 () | 2246850..2246963 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| A9X67_RS11155 () | 2247484..2248851 | + | 1368 | Protein_2136 | MHS family MFS transporter | - |
| A9X67_RS11160 () | 2248940..2250400 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| A9X67_RS11165 () | 2250435..2250638 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| A9X67_RS11170 () | 2250815..2251501 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| A9X67_RS11175 () | 2251590..2252336 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.002 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0 |