MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP016018 Location: 1096329..1128209 Organism: Escherichia coli strain ER1821R Replicon: chromosome
Accession: NZ_CP016018 Location: 1096329..1128209 Organism: Escherichia coli strain ER1821R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9X67_RS05420 () | 1092513..1093781 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| A9X67_RS05425 () | 1093801..1094778 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| A9X67_RS25195 () | 1095114..1097366 | - | 2253 | Protein_1029 | hypothetical protein | - |
| A9X67_RS25200 () | 1098752..1100125 | + | 1374 | Protein_1030 | DUF5507 domain-containing protein | - |
| A9X67_RS23080 () | 1100489..1100698 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| A9X67_RS23090 () | 1100853..1100972 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| A9X67_RS24675 () | 1101037..1105617 | + | 4581 | WP_010723187.1 | hypothetical protein | VF |
| A9X67_RS05465 () | 1105981..1106310 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| A9X67_RS05470 () | 1106331..1106648 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| A9X67_RS23140 () | 1106686..1106886 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| A9X67_RS05475 () | 1106895..1107377 | - | 483 | WP_001407480.1 | RadC family protein | - |
| A9X67_RS05480 () | 1107386..1107844 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| A9X67_RS23145 () | 1107947..1108170 | - | 224 | Protein_1039 | DUF905 family protein | - |
| A9X67_RS05485 () | 1108742..1110445 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| A9X67_RS05490 () | 1110587..1111596 | + | 1010 | Protein_1041 | arsenic transporter | - |
| A9X67_RS05495 () | 1111609..1111923 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| A9X67_RS05500 () | 1112148..1112615 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| A9X67_RS05505 () | 1112639..1113082 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| A9X67_RS05510 () | 1113082..1113318 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| A9X67_RS05515 () | 1113359..1114060 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| A9X67_RS05520 () | 1114277..1115098 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| A9X67_RS05525 () | 1115190..1116053 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| A9X67_RS05530 () | 1116408..1116779 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| A9X67_RS05535 () | 1116772..1117845 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| A9X67_RS05540 () | 1117987..1118250 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| A9X67_RS05545 () | 1118610..1120226 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| A9X67_RS05550 () | 1120223..1122412 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| A9X67_RS05555 () | 1122590..1123216 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| A9X67_RS05560 () | 1123369..1124778 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| A9X67_RS05565 () | 1124907..1125119 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| A9X67_RS05570 () | 1125163..1126119 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| A9X67_RS05575 () | 1126363..1127604 | - | 1242 | WP_000101723.1 | hypothetical protein ; Integrase | Integrase |
| A9X67_RS05585 () | 1128385..1128867 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| A9X67_RS05590 () | 1129038..1129475 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| A9X67_RS05595 () | 1129465..1129755 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| A9X67_RS05600 () | 1129817..1130158 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| A9X67_RS05605 () | 1130307..1131968 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| A9X67_RS05610 () | 1132054..1132932 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |