MGE detailed information
MGE type: Conjugative plasmid MGE length: 93029 bp
Accession: NZ_CP015996 Location: 1..93029 Organism: Escherichia coli strain S51 Replicon: plasmid pS51_1
Accession: NZ_CP015996 Location: 1..93029 Organism: Escherichia coli strain S51 Replicon: plasmid pS51_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9K64_RS27910 () | 1420..1685 | - | 266 | Protein_1 | prepilin | - |
| A9K64_RS29335 () | 2704..2922 | - | 219 | WP_071527775.1 | shufflon protein D' | - |
| A9K64_RS29345 () | 2971..3057 | - | 87 | Protein_3 | shufflon protein D' | - |
| A9K64_RS25055 () | 3056..4210 | + | 1155 | WP_001139957.1 | integrase | - |
| A9K64_RS25060 () | 4361..5184 | + | 824 | Protein_5 | conjugal transfer protein TraE | - |
| A9K64_RS25065 () | 5269..6471 | + | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| A9K64_RS25070 () | 6531..7115 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| A9K64_RS25075 () | 7510..7968 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| A9K64_RS25080 () | 7965..8783 | + | 819 | WP_064638599.1 | hypothetical protein | VF |
| A9K64_RS25085 () | 8780..9928 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| A9K64_RS27935 () | 9925..10215 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| A9K64_RS25090 () | 10230..10781 | + | 552 | WP_000014583.1 | Phospholipase D | VF |
| A9K64_RS25095 () | 10870..14635 | + | 3766 | Protein_13 | DNA primase | - |
| A9K64_RS25100 () | 14653..15000 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| A9K64_RS25105 () | 14997..15689 | + | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| A9K64_RS25110 () | 15700..16683 | + | 984 | WP_001191877.1 | hypothetical protein | VF |
| A9K64_RS25115 () | 16686..17975 | + | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| A9K64_RS25120 () | 17975..18679 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| A9K64_RS25125 () | 18679..19206 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| A9K64_RS25130 () | 19257..19661 | + | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| A9K64_RS25135 () | 19725..19913 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| A9K64_RS25140 () | 19897..20697 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| A9K64_RS25145 () | 20787..23831 | + | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| A9K64_RS25150 () | 23831..24445 | + | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| A9K64_RS25155 () | 24412..25614 | + | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| A9K64_RS25160 () | 25643..26227 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| A9K64_RS25165 () | 26324..28486 | + | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| A9K64_RS25170 () | 28551..29213 | + | 663 | WP_000653334.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| A9K64_RS25175 () | 29285..29494 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| A9K64_RS29525 () | 29886..30062 | + | 177 | WP_001054904.1 | hypothetical protein | - |
| A9K64_RS25190 () | 30127..30423 | - | 297 | WP_001275298.1 | hypothetical protein | - |
| A9K64_RS25195 () | 31046..31198 | - | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| - () | 31253..31310 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 31253..31310 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 31253..31310 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 31253..31310 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| A9K64_RS25200 () | 31490..32698 | + | 1209 | WP_000121274.1 | IncI1-type conjugal transfer protein TrbA | - |
| A9K64_RS25205 () | 32717..33787 | + | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| A9K64_RS25210 () | 33780..36071 | + | 2292 | WP_001289276.1 | hypothetical protein | - |
| A9K64_RS25215 () | 36108..38807 | - | 2700 | WP_001354015.1 | Protein TraI | Relaxase |
| A9K64_RS25220 () | 38818..39150 | - | 333 | WP_001281051.1 | hypothetical protein | - |
| A9K64_RS25225 () | 39383..39718 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| A9K64_RS25230 () | 39804..40652 | - | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| A9K64_RS25235 () | 41001..41198 | + | 198 | WP_001161115.1 | hypothetical protein | - |
| A9K64_RS25240 () | 41232..41483 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| A9K64_RS28720 () | 41514..41711 | - | 198 | WP_001348086.1 | hypothetical protein | - |
| A9K64_RS25245 () | 41734..42672 | - | 939 | WP_000078704.1 | Recombination-promoting nuclease RpnA | VF |
| A9K64_RS25250 () | 42737..43003 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| A9K64_RS25255 () | 43097..43531 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| A9K64_RS29530 () | 43820..44043 | + | 224 | Protein_46 | hypothetical protein | - |
| A9K64_RS29720 () | 44078..44257 | + | 180 | WP_001341457.1 | hypothetical protein | - |
| A9K64_RS25265 () | 44259..44759 | - | 501 | WP_000117633.1 | antirestriction protein ArdA | - |
| A9K64_RS29535 () | 45217..45812 | - | 596 | Protein_49 | hypothetical protein | - |
| A9K64_RS25275 () | 45809..46528 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| A9K64_RS25280 () | 46525..46959 | - | 435 | WP_064638604.1 | conjugation system SOS inhibitor PsiB | - |
| A9K64_RS25285 () | 47014..48948 | - | 1935 | Protein_52 | ParB/RepB/Spo0J family partition protein | - |
| A9K64_RS25290 () | 49034..49267 | - | 234 | WP_021532677.1 | DUF905 family protein | - |
| A9K64_RS25295 () | 49325..49852 | - | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| A9K64_RS29540 () | 50221..50289 | + | 69 | Protein_55 | pilus protein | - |
| A9K64_RS29545 () | 50289..50459 | - | 171 | WP_187703343.1 | hypothetical protein | - |
| A9K64_RS25305 () | 50621..50811 | - | 191 | Protein_57 | hypothetical protein | - |
| A9K64_RS25310 () | 50851..51223 | - | 373 | Protein_58 | DUF1380 family protein | - |
| A9K64_RS25315 () | 51270..51572 | - | 303 | WP_014653258.1 | antirestriction protein | - |
| A9K64_RS29550 () | 52113..52889 | - | 777 | WP_001005043.1 | hypothetical protein | - |
| A9K64_RS25330 () | 52935..53369 | - | 435 | WP_000274500.1 | DUF1380 family protein | - |
| A9K64_RS25335 () | 53383..53604 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| A9K64_RS25340 () | 53605..54288 | - | 684 | WP_000086147.1 | DNA methylase | - |
| A9K64_RS28740 () | 54364..54676 | - | 313 | Protein_64 | hypothetical protein | - |
| A9K64_RS25350 () | 54673..55575 | - | 903 | WP_001348079.1 | DUF1281 domain-containing protein | - |
| A9K64_RS25360 () | 56256..56648 | - | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| A9K64_RS25365 () | 56652..57626 | - | 975 | WP_001217836.1 | hypothetical protein | - |
| A9K64_RS29555 () | 57865..58239 | - | 375 | WP_000752652.1 | hypothetical protein | - |
| A9K64_RS25375 () | 58239..58871 | - | 633 | WP_000312331.1 | ParA family protein | - |
| A9K64_RS25380 () | 59455..60239 | - | 785 | Protein_70 | IS91 family transposase ISShvi3 | Transposase |
| A9K64_RS25385 () | 60241..60653 | - | 413 | Protein_71 | hypothetical protein | - |
| A9K64_RS25390 () | 61222..61482 | + | 261 | WP_000343102.1 | hypothetical protein | - |
| A9K64_RS25395 () | 61479..62069 | + | 591 | WP_000194561.1 | hypothetical protein | - |
| A9K64_RS25400 () | 62087..62434 | - | 348 | WP_000142424.1 | hypothetical protein | - |
| A9K64_RS25405 () | 62553..62900 | + | 348 | WP_000762580.1 | hypothetical protein | - |
| A9K64_RS25410 () | 62918..64798 | - | 1881 | WP_001283356.1 | colicin | - |
| A9K64_RS25415 () | 65077..66423 | - | 1347 | WP_001132019.1 | hypothetical protein | - |
| A9K64_RS25420 () | 66777..67379 | + | 603 | WP_000517689.1 | hypothetical protein | - |
| A9K64_RS25425 () | 67435..67929 | + | 495 | WP_001442119.1 | hypothetical protein | - |
| A9K64_RS25430 () | 67929..68195 | + | 267 | WP_000627831.1 | hypothetical protein | - |
| A9K64_RS25435 () | 68672..69088 | - | 417 | WP_031611423.1 | hypothetical protein | - |
| A9K64_RS25440 () | 69097..72063 | - | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| A9K64_RS25445 () | 72066..72359 | - | 294 | Protein_83 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| A9K64_RS25450 () | 72414..73118 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| A9K64_RS25460 () | 73172..73375 | + | 204 | Protein_85 | helix-turn-helix domain-containing protein | - |
| A9K64_RS25465 () | 73558..74418 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| A9K64_RS25470 () | 74582..75430 | - | 849 | WP_001058012.1 | 3'-5' exonuclease | - |
| A9K64_RS25475 () | 75476..75757 | - | 282 | WP_000969983.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A9K64_RS25480 () | 75754..76023 | - | 270 | WP_000079943.1 | hypothetical protein | Antitoxin Detail |
| A9K64_RS25490 () | 76931..77962 | - | 1032 | WP_000907875.1 | replication initiation protein | - |
| A9K64_RS25500 () | 78935..79198 | + | 264 | WP_001324596.1 | ash family protein | - |
| A9K64_RS25505 () | 79116..79403 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| A9K64_RS25510 () | 79845..80378 | + | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| A9K64_RS25515 () | 80632..81315 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| A9K64_RS25520 () | 81329..81895 | + | 567 | WP_000776428.1 | hypothetical protein | - |
| A9K64_RS25525 () | 82163..82417 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| A9K64_RS25530 () | 82460..82912 | + | 453 | WP_000008893.1 | hypothetical protein | - |
| A9K64_RS25535 () | 83586..84652 | + | 1067 | Protein_98 | hypothetical protein | VF |
| A9K64_RS25540 () | 84652..85089 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| A9K64_RS25545 () | 85103..86785 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| A9K64_RS25550 () | 86778..88073 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| A9K64_RS25555 () | 88060..88512 | + | 453 | WP_001247336.1 | hypothetical protein | VF |
| A9K64_RS25560 () | 88523..90076 | + | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| A9K64_RS25565 () | 90089..91186 | + | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| A9K64_RS25570 () | 91204..91818 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| A9K64_RS25575 () | 91828..92388 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| A9K64_RS25580 () | 92373..93029 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|