MGE detailed information
MGE type: Conjugative plasmid MGE length: 100096 bp
Accession: NZ_CP015916 Location: 1..100096 Organism: Escherichia coli strain 210205630 isolate 210205630 Replicon: plasmid pSLy4
Accession: NZ_CP015916 Location: 1..100096 Organism: Escherichia coli strain 210205630 isolate 210205630 Replicon: plasmid pSLy4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9C00_RS26560 () | 400..666 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| A9C00_RS26565 () | 731..1621 | + | 891 | WP_053289965.1 | Recombination-promoting nuclease RpnA | VF |
| A9C00_RS26570 () | 1621..1902 | + | 282 | WP_168994714.1 | hypothetical protein | VF |
| A9C00_RS26575 () | 1933..2184 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| A9C00_RS31025 () | 2218..2415 | - | 198 | Protein_5 | hypothetical protein | - |
| A9C00_RS26580 () | 2764..3612 | + | 849 | WP_001077033.1 | DUF4942 domain-containing protein | - |
| A9C00_RS26585 () | 3698..4033 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| A9C00_RS26590 () | 4267..4599 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| A9C00_RS26595 () | 4610..7309 | + | 2700 | WP_065304504.1 | Protein TraI | Relaxase |
| A9C00_RS26600 () | 7346..9637 | - | 2292 | WP_001289269.1 | TrbC | - |
| A9C00_RS26605 () | 9630..10700 | - | 1071 | WP_000151576.1 | IncI1-type conjugal transfer protein TrbB | - |
| A9C00_RS26610 () | 10719..11927 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 12107..12169 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 12107..12169 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 12107..12169 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 12107..12169 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| A9C00_RS26615 () | 12219..12371 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| A9C00_RS26620 () | 12443..12694 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| - () | 13081..13132 | - | 52 | NuclAT_1 | - | - |
| - () | 13081..13132 | - | 52 | NuclAT_1 | - | - |
| - () | 13081..13132 | - | 52 | NuclAT_1 | - | - |
| - () | 13081..13132 | - | 52 | NuclAT_1 | - | - |
| A9C00_RS31030 () | 13618..13794 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| A9C00_RS26635 () | 14186..14395 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| A9C00_RS26640 () | 14467..15129 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| A9C00_RS26645 () | 15200..17368 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| A9C00_RS26650 () | 17465..18049 | - | 585 | WP_001037985.1 | IncI1-type conjugal transfer protein TraX | - |
| A9C00_RS26655 () | 18078..19280 | - | 1203 | WP_021555368.1 | IncI1-type conjugal transfer protein TraW | - |
| A9C00_RS26660 () | 19247..19861 | - | 615 | WP_001542516.1 | IncI1-type conjugal transfer protein TraV | - |
| A9C00_RS26665 () | 19861..22905 | - | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| A9C00_RS26670 () | 22995..23795 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| A9C00_RS26675 () | 23779..23967 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| A9C00_RS26680 () | 24031..24435 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| A9C00_RS26685 () | 24486..25013 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| A9C00_RS26690 () | 25013..25717 | - | 705 | WP_040027719.1 | IncI1-type conjugal transfer protein TraP | - |
| A9C00_RS26695 () | 25717..27006 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| A9C00_RS26700 () | 27009..27992 | - | 984 | WP_021513963.1 | hypothetical protein | VF |
| A9C00_RS26705 () | 28003..28695 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| A9C00_RS26710 () | 28692..29039 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| A9C00_RS26715 () | 29057..32824 | - | 3768 | WP_061348655.1 | DNA primase | - |
| A9C00_RS26720 () | 32914..33465 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| A9C00_RS29115 () | 33480..33770 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| A9C00_RS26725 () | 33767..34915 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| A9C00_RS26730 () | 34912..35730 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| A9C00_RS26735 () | 35727..36185 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| A9C00_RS26740 () | 36580..37164 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| A9C00_RS26745 () | 37224..38426 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| A9C00_RS26750 () | 38512..39336 | - | 825 | WP_001238927.1 | hypothetical protein | - |
| A9C00_RS26755 () | 39487..40641 | - | 1155 | WP_001139958.1 | integrase | - |
| A9C00_RS29120 () | 40769..40924 | + | 156 | WP_001302705.1 | hypothetical protein | - |
| A9C00_RS30595 () | 41833..42081 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| A9C00_RS26770 () | 42078..43370 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| A9C00_RS26775 () | 43370..44026 | - | 657 | WP_001389386.1 | hypothetical protein | VF |
| A9C00_RS26780 () | 44011..44571 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| A9C00_RS26785 () | 44581..45195 | - | 615 | WP_000959786.1 | hypothetical protein | VF |
| A9C00_RS26790 () | 45213..46310 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| A9C00_RS26795 () | 46323..47876 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| A9C00_RS26800 () | 47887..48339 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| A9C00_RS26805 () | 48326..49621 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| A9C00_RS26810 () | 49614..51296 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| A9C00_RS26815 () | 51310..51747 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| A9C00_RS26820 () | 51747..52814 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| A9C00_RS26825 () | 53438..53734 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| A9C00_RS26830 () | 53910..54164 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| A9C00_RS26835 () | 54326..54877 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| A9C00_RS26840 () | 55050..55733 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| A9C00_RS26845 () | 55987..56520 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| A9C00_RS26850 () | 56962..57249 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| A9C00_RS26855 () | 57167..57430 | - | 264 | WP_001324596.1 | ash family protein | - |
| A9C00_RS26865 () | 58403..59434 | + | 1032 | WP_000907870.1 | replication initiation protein | - |
| A9C00_RS26875 () | 60644..61843 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| A9C00_RS26880 () | 61853..62041 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| A9C00_RS26885 () | 62821..63000 | + | 180 | WP_000347021.1 | hypothetical protein | - |
| A9C00_RS26890 () | 63387..65288 | - | 1902 | WP_065304505.1 | AAA family ATPase | - |
| A9C00_RS26895 () | 65394..65903 | - | 510 | WP_000190049.1 | hypothetical protein | - |
| A9C00_RS26900 () | 65987..66337 | - | 351 | WP_065304506.1 | hypothetical protein | - |
| A9C00_RS31035 () | 66488..66817 | - | 330 | WP_205247801.1 | hypothetical protein | - |
| A9C00_RS26910 () | 66935..67210 | - | 276 | WP_001135351.1 | hypothetical protein | - |
| A9C00_RS26920 () | 67652..68814 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| A9C00_RS26925 () | 69316..70283 | - | 968 | Protein_72 | IS5 family transposase IS903B | Transposase |
| A9C00_RS26930 () | 70524..70844 | + | 321 | WP_065304508.1 | FlxA-like family protein | - |
| A9C00_RS26935 () | 71019..71457 | - | 439 | Protein_74 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| A9C00_RS26940 () | 71555..72522 | + | 968 | Protein_75 | IS5 family transposase IS903B | Transposase |
| A9C00_RS30020 () | 73588..74273 | + | 686 | Protein_76 | IS3 family transposase ISEc14 | Transposase |
| A9C00_RS26955 () | 74946..76454 | + | 1509 | WP_065304502.1 | group II intron reverse transcriptase/maturase | - |
| A9C00_RS29195 () | 76535..77032 | + | 498 | Protein_78 | IS3 family transposase | - |
| A9C00_RS26965 () | 77247..77516 | + | 270 | WP_048213818.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| A9C00_RS26970 () | 77520..78050 | + | 531 | WP_048213819.1 | GNAT family N-acetyltransferase | Toxin Detail |
| A9C00_RS26975 () | 78135..79139 | - | 1005 | WP_048213820.1 | hypothetical protein | - |
| A9C00_RS26980 () | 79144..79389 | - | 246 | WP_048213821.1 | hypothetical protein | - |
| A9C00_RS26985 () | 79959..80309 | + | 351 | WP_000493379.1 | hypothetical protein | - |
| A9C00_RS26990 () | 80353..81042 | + | 690 | WP_065304509.1 | hypothetical protein | - |
| A9C00_RS26995 () | 81039..81827 | + | 789 | WP_000016498.1 | site-specific integrase | - |
| A9C00_RS27000 () | 82007..82651 | + | 645 | WP_001144036.1 | ParA family protein | - |
| A9C00_RS27005 () | 82738..83046 | + | 309 | WP_000048808.1 | hypothetical protein | - |
| A9C00_RS27010 () | 83460..84440 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| A9C00_RS27015 () | 84433..84849 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| A9C00_RS27020 () | 84851..86125 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| A9C00_RS27025 () | 86125..86562 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| A9C00_RS27030 () | 86559..86807 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| A9C00_RS27035 () | 87225..88127 | + | 903 | WP_205247800.1 | DUF1281 domain-containing protein | - |
| A9C00_RS30025 () | 88124..88435 | + | 312 | WP_065304464.1 | hypothetical protein | - |
| A9C00_RS27040 () | 88511..89194 | + | 684 | WP_001599378.1 | DNA methylase | - |
| A9C00_RS27045 () | 89195..89416 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| A9C00_RS27050 () | 89430..89864 | + | 435 | WP_000274502.1 | DUF1380 family protein | - |
| A9C00_RS30865 () | 89909..90679 | + | 771 | WP_065304510.1 | hypothetical protein | - |
| A9C00_RS27060 () | 91220..91522 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| A9C00_RS27065 () | 91569..91991 | + | 423 | WP_058647586.1 | DUF1380 family protein | - |
| A9C00_RS27070 () | 91988..92179 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| A9C00_RS30030 () | 92250..92564 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| A9C00_RS27080 () | 92948..93475 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| A9C00_RS27085 () | 93533..93766 | + | 234 | WP_052895272.1 | DUF905 domain-containing protein | - |
| A9C00_RS27090 () | 93825..95783 | + | 1959 | WP_065304511.1 | ParB/RepB/Spo0J family partition protein | - |
| A9C00_RS27095 () | 95838..96272 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| A9C00_RS27100 () | 96269..96988 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| A9C00_RS27105 () | 97117..98292 | + | 1176 | WP_065304512.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| A9C00_RS27115 () | 98740..99240 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|