MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 136327 bp
Accession: NZ_CP015836 Location: 1..136327 Organism: Escherichia coli strain MS6198 Replicon: plasmid pMS6198B
Accession: NZ_CP015836 Location: 1..136327 Organism: Escherichia coli strain MS6198 Replicon: plasmid pMS6198B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MS6198_RS31310 () | 1285..1567 | - | 283 | Protein_1 | conjugal transfer protein TrbJ | - |
| MS6198_RS26370 () | 1595..2111 | - | 517 | Protein_2 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| MS6198_RS26375 () | 2098..2381 | - | 284 | Protein_3 | type-F conjugative transfer system pilin chaperone TraQ | - |
| MS6198_RS26380 () | 2500..2847 | - | 348 | WP_001287894.1 | conjugal transfer protein TrbA | - |
| MS6198_RS26390 () | 2844..3603 | - | 760 | Protein_5 | type-F conjugative transfer system pilin assembly protein TraF | - |
| MS6198_RS26395 () | 3596..3853 | - | 258 | WP_039023152.1 | conjugal transfer protein TrbE | - |
| MS6198_RS26400 () | 3880..5667 | - | 1788 | WP_039052473.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| MS6198_RS26405 () | 5978..6358 | - | 381 | WP_039052469.1 | hypothetical protein | - |
| MS6198_RS26410 () | 6355..6993 | - | 639 | WP_039052468.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| MS6198_RS26415 () | 7002..7994 | - | 993 | WP_000830835.1 | conjugal transfer pilus assembly protein TraU | - |
| MS6198_RS26420 () | 7991..8623 | - | 633 | WP_039052467.1 | type-F conjugative transfer system protein TraW | - |
| MS6198_RS26425 () | 8620..9006 | - | 387 | WP_000099693.1 | type-F conjugative transfer system protein TrbI | - |
| MS6198_RS26430 () | 9003..11630 | - | 2628 | WP_001064265.1 | type IV secretion system protein TraC | - |
| MS6198_RS29735 () | 11790..12011 | - | 222 | WP_001278685.1 | conjugal transfer protein TraR | - |
| MS6198_RS26435 () | 12146..12661 | - | 516 | WP_039052466.1 | type IV conjugative transfer system lipoprotein TraV | - |
| MS6198_RS26440 () | 12658..12909 | - | 252 | WP_039052465.1 | conjugal transfer protein TrbG | - |
| MS6198_RS26445 () | 12902..13270 | - | 369 | WP_071550054.1 | conjugal transfer protein TrbD | - |
| MS6198_RS26450 () | 13209..13790 | - | 582 | WP_052273600.1 | conjugal transfer protein TraP | - |
| MS6198_RS26455 () | 13759..15210 | - | 1452 | WP_039052463.1 | conjugal transfer protein TraB | - |
| MS6198_RS26460 () | 15210..15914 | - | 705 | WP_148936096.1 | type-F conjugative transfer system secretin TraK | - |
| MS6198_RS26465 () | 15925..16491 | - | 567 | WP_039052461.1 | type IV conjugative transfer system protein TraE | - |
| MS6198_RS26470 () | 16513..16824 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| MS6198_RS26475 () | 16829..17191 | - | 363 | WP_039052460.1 | type IV conjugative transfer system pilin TraA | - |
| MS6198_RS26480 () | 17224..17619 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| MS6198_RS26485 () | 17718..18389 | - | 672 | WP_064757395.1 | conjugal transfer transcriptional regulator TraJ | - |
| MS6198_RS26490 () | 18386..19083 | - | 698 | Protein_26 | IS1 family transposase IS1G | Transposase |
| MS6198_RS29740 () | 19256..19873 | + | 618 | Protein_27 | ISL3 family transposase ISEc38 | Transposase |
| MS6198_RS26500 () | 20337..21344 | - | 1008 | WP_001232702.1 | LacI family DNA-binding transcriptional regulator | - |
| MS6198_RS26505 () | 21370..22779 | - | 1410 | WP_039052598.1 | sucrose-6-phosphate hydrolase | - |
| MS6198_RS26510 () | 22779..24149 | - | 1371 | WP_000344915.1 | sucrose-specific PTS transporter subunit IIBC | - |
| MS6198_RS26515 () | 24210..25727 | - | 1518 | WP_039052597.1 | carbohydrate porin | - |
| MS6198_RS26520 () | 25895..26815 | - | 921 | WP_039052596.1 | aminoimidazole riboside kinase | - |
| MS6198_RS31580 () | 27176..27534 | + | 359 | Protein_33 | pilus protein | - |
| MS6198_RS26530 () | 27515..28078 | - | 564 | WP_001377760.1 | class I SAM-dependent methyltransferase | - |
| MS6198_RS26535 () | 28126..29487 | - | 1362 | WP_039052595.1 | DUF3560 domain-containing protein | - |
| MS6198_RS26540 () | 29539..29768 | - | 230 | Protein_36 | hypothetical protein | - |
| MS6198_RS26550 () | 30721..30912 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| MS6198_RS26555 () | 30961..31263 | - | 303 | WP_077878372.1 | antirestriction protein | - |
| MS6198_RS31585 () | 31802..32251 | - | 450 | Protein_39 | hypothetical protein | - |
| MS6198_RS26570 () | 32428..32631 | + | 204 | WP_069383072.1 | hypothetical protein | - |
| MS6198_RS26575 () | 32660..33357 | + | 698 | Protein_41 | IS1 family transposase IS1G | Transposase |
| MS6198_RS26580 () | 33378..33611 | - | 234 | Protein_42 | sodium/glutamate symporter | - |
| MS6198_RS26585 () | 34055..34375 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| MS6198_RS26590 () | 34368..34754 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| MS6198_RS26595 () | 34762..35448 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| MS6198_RS26600 () | 35426..36049 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| MS6198_RS26605 () | 36131..37336 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| MS6198_RS26610 () | 37449..38042 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| MS6198_RS26615 () | 38175..38546 | + | 372 | WP_035689358.1 | Transposon Tn10 TetD protein | VF |
| MS6198_RS26620 () | 38556..39773 | - | 1218 | WP_061856962.1 | IS4 family transposase IS10R | Transposase |
| MS6198_RS26630 () | 39795..40915 | + | 1121 | WP_087758690.1 | IS3 family transposase ISSen4 | Transposase |
| MS6198_RS26635 () | 41899..42675 | + | 777 | WP_039052454.1 | hypothetical protein | - |
| MS6198_RS26640 () | 42677..44941 | + | 2265 | WP_039052447.1 | UvrD-helicase domain-containing protein | - |
| MS6198_RS26645 () | 45284..46264 | + | 981 | WP_039052448.1 | IS5 family transposase ISKpn26 | Transposase |
| MS6198_RS30660 () | 46678..47768 | + | 1091 | Protein_55 | translesion error-prone DNA polymerase V subunit UmuC | - |
| MS6198_RS26660 () | 47773..48165 | - | 393 | WP_039052449.1 | plasmid partitioning/stability family protein | - |
| MS6198_RS26665 () | 48170..49141 | - | 972 | WP_039052450.1 | plasmid segregation protein parM | - |
| MS6198_RS26670 () | 49370..50014 | + | 645 | WP_000633913.1 | AAA family ATPase | - |
| MS6198_RS26675 () | 50008..50283 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| MS6198_RS26680 () | 50421..50921 | - | 501 | Protein_60 | IS91 family transposase ISAzo26 | Transposase |
| MS6198_RS30665 () | 50903..51142 | - | 240 | WP_157916581.1 | resolvase | - |
| MS6198_RS26685 () | 51249..51857 | - | 609 | WP_039052451.1 | hypothetical protein | - |
| MS6198_RS26690 () | 51927..52277 | - | 351 | WP_039052452.1 | hypothetical protein | - |
| MS6198_RS26695 () | 52955..53950 | + | 996 | WP_000246635.1 | hypothetical protein | - |
| MS6198_RS26700 () | 53954..54886 | + | 933 | WP_000991831.1 | hypothetical protein | - |
| MS6198_RS26705 () | 55179..55364 | + | 186 | WP_001586223.1 | hypothetical protein | - |
| MS6198_RS26710 () | 55365..56267 | + | 903 | WP_024187432.1 | hypothetical protein | - |
| MS6198_RS26715 () | 56269..57138 | + | 870 | WP_001586225.1 | hypothetical protein | - |
| MS6198_RS26720 () | 57195..58760 | - | 1566 | WP_001586226.1 | ATP-binding protein | - |
| MS6198_RS26725 () | 59047..59559 | + | 513 | WP_001586228.1 | hypothetical protein | - |
| MS6198_RS26730 () | 59593..60726 | - | 1134 | WP_000545985.1 | DUF3800 domain-containing protein | - |
| MS6198_RS31330 () | 60893..61665 | - | 773 | Protein_72 | hypothetical protein | - |
| MS6198_RS26745 () | 61694..62179 | - | 486 | WP_001403958.1 | hypothetical protein | - |
| MS6198_RS26750 () | 62570..65191 | + | 2622 | WP_001586230.1 | hypothetical protein | - |
| MS6198_RS26755 () | 65390..65620 | + | 231 | WP_001261274.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| MS6198_RS26760 () | 65709..65984 | + | 276 | WP_001403920.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| MS6198_RS31335 () | 65989..66206 | - | 218 | Protein_77 | transposase | - |
| MS6198_RS26765 () | 66207..66737 | - | 531 | WP_000348883.1 | GNAT family N-acetyltransferase | Toxin Detail |
| MS6198_RS26770 () | 66741..67010 | - | 270 | WP_001275013.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| MS6198_RS26775 () | 67898..68887 | + | 990 | WP_123002471.1 | RepB family plasmid replication initiator protein | - |
| MS6198_RS26780 () | 69210..69950 | - | 741 | WP_001586233.1 | tyrosine-type recombinase/integrase | - |
| MS6198_RS31340 () | 70071..70253 | - | 183 | WP_042004909.1 | hypothetical protein | - |
| MS6198_RS26790 () | 70320..70481 | - | 162 | WP_001440647.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| MS6198_RS26795 () | 70597..70865 | - | 269 | Protein_84 | type II toxin-antitoxin system ParD family antitoxin | - |
| MS6198_RS26800 () | 71161..71901 | - | 741 | WP_029702141.1 | IS91 family transposase ISMno23 | Transposase |
| MS6198_RS26805 () | 71941..72638 | - | 698 | Protein_86 | IS1 family transposase IS1X2 | Transposase |
| MS6198_RS26815 () | 72854..73303 | - | 450 | WP_029702172.1 | hypothetical protein | - |
| MS6198_RS30675 () | 73830..74353 | + | 524 | Protein_88 | IS1 family transposase | - |
| MS6198_RS26825 () | 74445..74726 | - | 282 | Protein_89 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| MS6198_RS26835 () | 74982..76314 | - | 1333 | Protein_90 | group II intron reverse transcriptase/maturase | - |
| MS6198_RS26845 () | 76931..77791 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| MS6198_RS26850 () | 77974..78531 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| MS6198_RS31345 () | 78695..78889 | + | 195 | Protein_93 | Tn3 family transposase TnpA_Tn3 | Transposase |
| MS6198_RS26860 () | 79095..80357 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| MS6198_RS26870 () | 80613..81488 | + | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| MS6198_RS26875 () | 81535..81867 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| MS6198_RS26880 () | 81881..84124 | + | 2244 | Protein_97 | Tn3 family transposase TnpA_Tn3 | Transposase |
| MS6198_RS26885 () | 84189..84893 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| MS6198_RS26890 () | 85216..86748 | - | 1533 | WP_013362816.1 | IS91 family transposase ISVsa3 | Transposase |
| MS6198_RS31590 () | 86975..87316 | - | 342 | WP_023909256.1 | 60 kDa chaperonin 2 | VF |
| MS6198_RS26900 () | 87277..87726 | - | 450 | WP_013362817.1 | hypothetical protein | - |
| MS6198_RS26910 () | 88235..89355 | + | 1121 | WP_087758690.1 | IS3 family transposase ISSen4 | Transposase |
| MS6198_RS31595 () | 89443..89613 | - | 171 | WP_170852050.1 | rRNA adenine methyltransferase | - |
| MS6198_RS26915 () | 89558..90295 | - | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| MS6198_RS26920 () | 90421..90516 | - | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| MS6198_RS26925 () | 90651..91355 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| MS6198_RS26930 () | 91477..92382 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| MS6198_RS26935 () | 92379..93617 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| MS6198_RS26940 () | 93617..94201 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| MS6198_RS26950 () | 94694..95458 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| MS6198_RS31600 () | 95576..95641 | - | 66 | Protein_111 | EAL domain-containing protein | - |
| MS6198_RS26955 () | 95685..95990 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| MS6198_RS26960 () | 96001..97206 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| MS6198_RS26965 () | 97434..98438 | + | 1005 | WP_000427620.1 | IS110 family transposase IS4321 | Transposase |
| MS6198_RS26970 () | 98620..98823 | - | 204 | WP_064765192.1 | hypothetical protein | - |
| MS6198_RS26975 () | 99020..99859 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| MS6198_RS26980 () | 99853..100200 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| MS6198_RS26985 () | 100406..101194 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| MS6198_RS26990 () | 101325..101798 | - | 474 | WP_001389366.1 | Dihydrofolate reductase type 1 | ARG |
| MS6198_RS26995 () | 101956..102636 | + | 681 | Protein_120 | IS91 family transposase ISAzo26 | Transposase |
| MS6198_RS27000 () | 102701..103405 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| MS6198_RS27005 () | 103471..104016 | + | 546 | Protein_122 | Tn3 family transposase TnpA_Tn3 | Transposase |
| MS6198_RS27015 () | 104052..104467 | - | 416 | Protein_123 | IS1 family transposase | - |
| MS6198_RS27020 () | 104716..105117 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| MS6198_RS31365 () | 105050..105307 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| MS6198_RS27030 () | 105400..106053 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| MS6198_RS31805 () | 106151..106291 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| MS6198_RS27035 () | 106992..107849 | - | 858 | WP_029702152.1 | incFII family plasmid replication initiator RepA | - |
| MS6198_RS27040 () | 107842..107916 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| MS6198_RS27045 () | 108152..108409 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| MS6198_RS27050 () | 108693..108899 | - | 207 | WP_032215358.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 108886..108947 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 108886..108947 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 108886..108947 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 108886..108947 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| MS6198_RS31605 () | 109086..109352 | - | 267 | WP_087757657.1 | hypothetical protein | - |
| MS6198_RS27060 () | 109727..110296 | - | 570 | WP_029702150.1 | DUF2726 domain-containing protein | - |
| MS6198_RS27065 () | 110448..111074 | - | 627 | WP_029702149.1 | hypothetical protein | - |
| MS6198_RS27070 () | 111486..111695 | - | 210 | WP_039023209.1 | hypothetical protein | - |
| MS6198_RS27075 () | 111826..112386 | - | 561 | WP_001567328.1 | fertility inhibition protein FinO | - |
| MS6198_RS27080 () | 112441..113187 | - | 747 | WP_052273601.1 | conjugal transfer pilus acetylase TraX | - |
| MS6198_RS27085 () | 113215..113961 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| MS6198_RS27090 () | 113976..115517 | - | 1542 | WP_002431311.1 | IS21 family transposase ISEc12 | Transposase |
| MS6198_RS27095 () | 115793..121063 | - | 5271 | WP_039052472.1 | Multifunctional conjugation protein TraI | Relaxase |
| MS6198_RS27100 () | 121145..121372 | + | 228 | WP_039023146.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| MS6198_RS27105 () | 121372..121770 | + | 399 | WP_039023147.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| MS6198_RS27110 () | 121779..123977 | - | 2199 | WP_061856952.1 | type IV conjugative transfer system coupling protein TraD | - |
| MS6198_RS27115 () | 124230..124961 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| MS6198_RS27120 () | 124993..125490 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| MS6198_RS27125 () | 125509..128328 | - | 2820 | WP_039023149.1 | conjugal transfer mating pair stabilization protein TraG | - |
| MS6198_RS27130 () | 128325..129698 | - | 1374 | WP_039023150.1 | conjugal transfer protein TraH | - |
| MS6198_RS27135 () | 129698..130060 | - | 363 | WP_071550055.1 | P-type conjugative transfer protein TrbJ | - |
| MS6198_RS27140 () | 129990..130535 | - | 546 | WP_039052470.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| MS6198_RS27145 () | 130522..130806 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| MS6198_RS27150 () | 130925..131272 | - | 348 | WP_001287894.1 | conjugal transfer protein TrbA | - |
| MS6198_RS27155 () | 131288..132031 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| MS6198_RS27160 () | 132024..132281 | - | 258 | WP_039023152.1 | conjugal transfer protein TrbE | - |
| MS6198_RS27165 () | 132308..134095 | - | 1788 | WP_039052473.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| MS6198_RS27170 () | 134406..134785 | - | 380 | Protein_155 | hypothetical protein | - |
| MS6198_RS27175 () | 134754..135363 | - | 610 | Protein_156 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| MS6198_RS27180 () | 135430..136326 | - | 897 | Protein_157 | conjugal transfer pilus assembly protein TraU | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|