MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 64339 bp
Accession: NZ_CP015586 Location: 1..64339 Organism: Roseomonas gilardii strain U14-5 Replicon: plasmid 2
Accession: NZ_CP015586 Location: 1..64339 Organism: Roseomonas gilardii strain U14-5 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RGI145_RS24015 () | 5253..6059 | + | 807 | WP_075801056.1 | IS5 family transposase ISMdi26 | Transposase |
| RGI145_RS24025 () | 6146..7374 | + | 1229 | WP_115359401.1 | IS3 family transposase ISAli4 | Transposase |
| RGI145_RS24030 () | 7629..8399 | + | 771 | WP_156878776.1 | GntR family transcriptional regulator | - |
| RGI145_RS24035 () | 8506..9456 | + | 951 | WP_167668437.1 | 2-hydroxyacid dehydrogenase | - |
| RGI145_RS24040 () | 9532..10833 | + | 1302 | WP_075801059.1 | MFS transporter | - |
| RGI145_RS24045 () | 11010..12197 | + | 1188 | WP_075801060.1 | alpha-hydroxy-acid oxidizing protein | - |
| RGI145_RS24840 () | 12220..12453 | - | 234 | WP_083671545.1 | IS5 family transposase ISPme2 | Transposase |
| RGI145_RS24055 () | 12516..12737 | + | 222 | WP_083671547.1 | inner membrane CreD family protein | - |
| RGI145_RS24845 () | 14009..14613 | - | 605 | Protein_10 | IS3 family transposase ISMra4 | Transposase |
| RGI145_RS24850 () | 14518..14976 | + | 459 | WP_083671565.1 | EAL domain-containing protein | - |
| RGI145_RS24085 () | 14954..15160 | - | 207 | WP_019463438.1 | hypothetical protein | - |
| RGI145_RS24090 () | 15164..16762 | - | 1599 | WP_075801064.1 | IS66 family transposase ISAli10 | Transposase |
| RGI145_RS24095 () | 16822..17169 | - | 348 | WP_075800935.1 | IS66 family transposase ISAzs20 | Transposase |
| RGI145_RS24100 () | 17166..17567 | - | 402 | WP_167668423.1 | IS66 family transposase ISAzs21 | Transposase |
| RGI145_RS24105 () | 17663..17962 | + | 300 | WP_083671549.1 | IS3 family transposase ISMdi5 | Transposase |
| RGI145_RS24110 () | 17910..18839 | - | 930 | WP_075801065.1 | hypothetical protein | - |
| RGI145_RS24115 () | 19151..19420 | + | 270 | WP_156878777.1 | hypothetical protein | - |
| RGI145_RS24120 () | 19692..22160 | + | 2469 | WP_083671553.1 | PAS domain S-box protein | - |
| RGI145_RS24125 () | 22230..22727 | - | 498 | WP_075801068.1 | DUF892 family protein | - |
| RGI145_RS24130 () | 22884..23087 | - | 204 | WP_075801069.1 | DUF2934 domain-containing protein | - |
| RGI145_RS24135 () | 23664..24200 | - | 537 | WP_156878778.1 | hypothetical protein | - |
| RGI145_RS24140 () | 24197..24502 | - | 306 | WP_075801071.1 | hypothetical protein | - |
| RGI145_RS24145 () | 24525..25076 | - | 552 | WP_075801072.1 | hypothetical protein | - |
| RGI145_RS24150 () | 25218..25583 | + | 366 | WP_083671555.1 | helix-turn-helix domain-containing protein | - |
| RGI145_RS24155 () | 26349..26906 | + | 558 | WP_156878779.1 | hypothetical protein | - |
| RGI145_RS24160 () | 27039..28619 | - | 1581 | WP_075801074.1 | ABC transporter substrate-binding protein | - |
| RGI145_RS24165 () | 28695..29750 | - | 1056 | WP_075801075.1 | tyrosine-type recombinase/integrase | - |
| RGI145_RS24170 () | 29747..31582 | - | 1836 | WP_075801076.1 | IS91 family transposase ISSde12 | Transposase |
| RGI145_RS24175 () | 31687..32154 | - | 468 | WP_075801077.1 | helix-turn-helix domain-containing protein | - |
| RGI145_RS24180 () | 32263..34143 | - | 1881 | WP_075801078.1 | IS481 family transposase ISBxe4 | Transposase |
| RGI145_RS24185 () | 34305..34688 | - | 384 | WP_156878781.1 | hypothetical protein | - |
| RGI145_RS24190 () | 34908..35141 | + | 234 | WP_075801080.1 | helix-turn-helix transcriptional regulator | - |
| RGI145_RS25340 () | 35274..35747 | - | 474 | WP_156878782.1 | hypothetical protein | - |
| RGI145_RS24200 () | 36189..36839 | + | 651 | WP_075801082.1 | Chromosome-partitioning ATPase Soj | VF |
| RGI145_RS24205 () | 37277..37561 | + | 285 | WP_075801083.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RGI145_RS24210 () | 37574..37885 | + | 312 | WP_075801084.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| RGI145_RS24855 () | 38143..38909 | + | 767 | WP_156878783.1 | IS5 family transposase ISNGR9 | Transposase |
| RGI145_RS25345 () | 38915..39226 | - | 312 | WP_156878784.1 | hypothetical protein | - |
| RGI145_RS24230 () | 39393..40421 | + | 1029 | WP_075801087.1 | thymidylate synthase | - |
| RGI145_RS24235 () | 40418..41362 | + | 945 | WP_075801088.1 | hypothetical protein | - |
| RGI145_RS24240 () | 41352..42473 | - | 1122 | WP_075801089.1 | ImmA/IrrE family metallo-endopeptidase | - |
| RGI145_RS24245 () | 42466..42735 | - | 270 | WP_156878785.1 | hypothetical protein | - |
| RGI145_RS25530 () | 42842..43267 | - | 426 | WP_167668438.1 | hypothetical protein | - |
| RGI145_RS24255 () | 43273..44892 | - | 1620 | WP_156878787.1 | hypothetical protein | - |
| RGI145_RS24260 () | 45006..46091 | - | 1086 | WP_075801092.1 | DUF4297 domain-containing protein | - |
| RGI145_RS24265 () | 46526..47281 | - | 756 | WP_075801093.1 | GntR family transcriptional regulator | - |
| RGI145_RS24270 () | 47365..48729 | + | 1365 | WP_075801108.1 | adenylosuccinate lyase family protein | - |
| RGI145_RS24275 () | 48843..50165 | + | 1323 | WP_075801094.1 | cation:dicarboxylase symporter family transporter | - |
| RGI145_RS24280 () | 50258..51148 | + | 891 | WP_075801095.1 | dihydrodipicolinate synthase family protein | - |
| RGI145_RS24285 () | 51222..51779 | - | 558 | WP_075801096.1 | Tn3 family transposase TnpR_TnXo19 | Transposase |
| RGI145_RS24290 () | 51853..53127 | - | 1275 | WP_075801097.1 | Sensor kinase CckA | VF |
| RGI145_RS24295 () | 53114..54604 | - | 1491 | WP_075801098.1 | AAA family ATPase | - |
| RGI145_RS24300 () | 55058..55294 | + | 237 | WP_075801099.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| RGI145_RS24305 () | 55291..55701 | + | 411 | WP_075801100.1 | PIN domain-containing protein | Toxin Detail |
| RGI145_RS24310 () | 55698..56801 | + | 1104 | WP_075801101.1 | site-specific integrase | - |
| RGI145_RS24315 () | 56879..57607 | + | 729 | WP_075801102.1 | hypothetical protein | - |
| RGI145_RS24320 () | 57716..58123 | + | 408 | WP_075801103.1 | hypothetical protein | - |
| RGI145_RS24325 () | 58210..58740 | + | 531 | Protein_59 | transposase | - |
| RGI145_RS25535 () | 58909..59637 | - | 729 | WP_167668435.1 | hypothetical protein | - |
| RGI145_RS24330 () | 60022..64233 | + | 4212 | WP_075801104.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|