MGE detailed information
MGE type: Conjugative plasmid MGE length: 85291 bp
Accession: NZ_CP015373 Location: 1..85291 Organism: Pandoraea pnomenusa strain MCB032 Replicon: plasmid unnamed 2
Accession: NZ_CP015373 Location: 1..85291 Organism: Pandoraea pnomenusa strain MCB032 Replicon: plasmid unnamed 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6P55_RS25430 () | 409..995 | + | 587 | Protein_2 | dihydrolipoyl dehydrogenase | - |
| A6P55_RS25435 () | 1104..2648 | + | 1545 | Protein_3 | IS91 family transposase ISPps1 | Transposase |
| A6P55_RS26685 () | 2812..4099 | - | 1288 | Protein_4 | IS30 family transposase ISPa37 | Transposase |
| A6P55_RS26690 () | 4167..4452 | + | 286 | Protein_5 | IS3 family transposase | - |
| A6P55_RS25445 () | 4551..4853 | - | 303 | WP_063599767.1 | hypothetical protein | - |
| A6P55_RS25450 () | 4957..6342 | - | 1386 | WP_063599754.1 | MFS transporter | - |
| A6P55_RS25455 () | 6547..7524 | - | 978 | WP_063599755.1 | PDR/VanB family oxidoreductase | - |
| A6P55_RS25460 () | 7622..8101 | - | 480 | WP_011489368.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| A6P55_RS25465 () | 8104..9366 | - | 1263 | WP_011489367.1 | Rieske 2Fe-2S domain-containing protein | - |
| A6P55_RS25470 () | 10162..11145 | - | 984 | WP_063599756.1 | AraC family transcriptional regulator | - |
| A6P55_RS25475 () | 11255..12313 | - | 1059 | WP_063599757.1 | maleylacetate reductase | - |
| A6P55_RS25480 () | 12310..13020 | - | 711 | WP_063599768.1 | dienelactone hydrolase family protein | - |
| A6P55_RS25485 () | 13042..14023 | - | 982 | Protein_14 | tripartite tricarboxylate transporter substrate binding protein | - |
| A6P55_RS25490 () | 14050..15162 | - | 1113 | WP_063599758.1 | muconate cycloisomerase family protein | - |
| A6P55_RS25495 () | 15159..15941 | - | 783 | WP_063599759.1 | chlorocatechol 1,2-dioxygenase | - |
| A6P55_RS26695 () | 16111..16995 | + | 885 | WP_081256096.1 | LysR family transcriptional regulator | - |
| A6P55_RS25505 () | 17472..20387 | + | 2916 | WP_003049965.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| A6P55_RS25510 () | 20570..20770 | + | 201 | WP_003159550.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| A6P55_RS25515 () | 22114..22395 | - | 282 | WP_011114071.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| A6P55_RS25520 () | 22382..22645 | - | 264 | WP_011114070.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| A6P55_RS25525 () | 22818..23246 | + | 429 | WP_011114069.1 | antirestriction protein | - |
| A6P55_RS25530 () | 23246..23509 | + | 264 | WP_011296181.1 | hypothetical protein | - |
| A6P55_RS25535 () | 23521..24729 | + | 1209 | WP_011114068.1 | hypothetical protein | - |
| A6P55_RS25540 () | 24746..25003 | + | 258 | WP_011114067.1 | hypothetical protein | - |
| A6P55_RS25545 () | 25161..25397 | + | 237 | WP_011114066.1 | stable inheritance protein KleA | - |
| A6P55_RS25550 () | 25606..25932 | + | 327 | WP_011114065.1 | hypothetical protein | - |
| A6P55_RS25555 () | 25934..26263 | + | 330 | WP_011114064.1 | DUF2761 domain-containing protein | - |
| A6P55_RS25560 () | 26370..26678 | + | 309 | WP_011114062.1 | KorA protein | - |
| A6P55_RS25565 () | 26675..27439 | + | 765 | WP_011114061.1 | ParA family protein | - |
| A6P55_RS25570 () | 27436..28485 | + | 1050 | WP_011114060.1 | ParB/RepB/Spo0J family partition protein | - |
| A6P55_RS25575 () | 28664..29695 | + | 1032 | WP_011114059.1 | DNA-binding protein | - |
| A6P55_RS25580 () | 29866..30213 | + | 348 | WP_000664557.1 | hypothetical protein | - |
| A6P55_RS26720 () | 30242..30894 | + | 653 | Protein_34 | conjugal transfer protein | - |
| A6P55_RS25595 () | 31097..31537 | - | 441 | WP_000718516.1 | conjugal transfer protein TraM | - |
| A6P55_RS25600 () | 31537..32262 | - | 726 | WP_011114058.1 | protein TraL | - |
| A6P55_RS26725 () | 32262..32659 | - | 398 | Protein_37 | TraK family protein | - |
| A6P55_RS25605 () | 33033..33407 | + | 375 | WP_000426567.1 | conjugal transfer transcriptional regulator TraJ | - |
| A6P55_RS25610 () | 33442..35682 | + | 2241 | WP_011114057.1 | Protein TraI | Relaxase |
| A6P55_RS25615 () | 35679..37592 | + | 1914 | WP_000694765.1 | hypothetical protein | VF |
| A6P55_RS25620 () | 37589..38125 | + | 537 | WP_006122512.1 | conjugative transfer signal peptidase TraF | - |
| A6P55_RS25625 () | 38137..40200 | + | 2064 | WP_011114056.1 | DNA topoisomerase III | - |
| A6P55_RS25630 () | 40222..40611 | + | 390 | WP_006122510.1 | protein TraD | - |
| A6P55_RS25635 () | 40615..44961 | + | 4347 | WP_011114055.1 | DUF1738 domain-containing protein | - |
| A6P55_RS25645 () | 45548..46084 | - | 537 | WP_037031213.1 | hypothetical protein | - |
| A6P55_RS25650 () | 46098..46424 | - | 327 | WP_009238012.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| A6P55_RS25655 () | 46421..46678 | - | 258 | WP_009238013.1 | antitoxin | Antitoxin Detail |
| A6P55_RS25660 () | 46860..47426 | + | 567 | WP_063599763.1 | Tn3 family transposase ISPsy42 | Transposase |
| A6P55_RS25665 () | 47714..48145 | - | 432 | WP_001665065.1 | hypothetical protein | VF |
| A6P55_RS25670 () | 48161..48859 | - | 699 | WP_011114053.1 | conjugal transfer protein TraX | - |
| A6P55_RS25675 () | 48859..49125 | - | 267 | WP_010890140.1 | hypothetical protein | - |
| A6P55_RS25680 () | 49154..49789 | - | 636 | WP_011114052.1 | hypothetical protein | VF |
| A6P55_RS25685 () | 49803..50390 | - | 588 | WP_010890138.1 | conjugal transfer protein TrbM | - |
| A6P55_RS25690 () | 50408..52126 | - | 1719 | WP_011114051.1 | P-type conjugative transfer protein TrbL | - |
| A6P55_RS25695 () | 52137..52364 | - | 228 | WP_000644148.1 | entry exclusion lipoprotein TrbK | - |
| A6P55_RS25700 () | 52374..53138 | - | 765 | WP_010890135.1 | P-type conjugative transfer protein TrbJ | - |
| A6P55_RS25705 () | 53159..54580 | - | 1422 | WP_011114050.1 | hypothetical protein | VF |
| A6P55_RS25710 () | 54585..55073 | - | 489 | WP_006122479.1 | conjugal transfer protein TrbH | - |
| A6P55_RS25715 () | 55076..55975 | - | 900 | WP_006122480.1 | P-type conjugative transfer protein TrbG | - |
| A6P55_RS25720 () | 55993..56775 | - | 783 | WP_011114048.1 | conjugal transfer protein TrbF | - |
| A6P55_RS25725 () | 56772..59330 | - | 2559 | WP_011114047.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| A6P55_RS25730 () | 59327..59638 | - | 312 | WP_001207961.1 | conjugal transfer protein TrbD | - |
| A6P55_RS25735 () | 59642..60105 | - | 464 | Protein_63 | conjugal transfer system pilin TrbC | - |
| A6P55_RS25740 () | 60122..61084 | - | 963 | WP_000132020.1 | hypothetical protein | VF |
| A6P55_RS25745 () | 61394..61756 | - | 363 | WP_011114045.1 | transcriptional regulator | - |
| A6P55_RS25750 () | 61870..62211 | + | 342 | WP_000019167.1 | single-stranded DNA-binding protein | - |
| A6P55_RS25755 () | 62258..63478 | + | 1221 | WP_011114072.1 | replication initiator protein A | - |
| A6P55_RS25760 () | 63591..64025 | - | 435 | WP_003131969.1 | mercury resistance transcriptional regulator MerR | - |
| A6P55_RS25765 () | 64097..64447 | + | 351 | WP_003131974.1 | mercuric ion transporter MerT | - |
| A6P55_RS25770 () | 64460..64735 | + | 276 | WP_003131987.1 | mercury resistance system periplasmic binding protein MerP | - |
| A6P55_RS25775 () | 64807..66492 | + | 1686 | WP_003158917.1 | mercury(II) reductase | - |
| A6P55_RS25780 () | 66510..66875 | + | 366 | WP_000995360.1 | mercury resistance co-regulator MerD | - |
| A6P55_RS25785 () | 66872..67108 | + | 237 | WP_003132004.1 | broad-spectrum mercury transporter MerE | - |
| A6P55_RS25790 () | 67105..68094 | + | 990 | WP_003132006.1 | hypothetical protein | VF |
| A6P55_RS25795 () | 68225..68785 | + | 561 | WP_003124096.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| A6P55_RS25800 () | 68788..71520 | + | 2733 | Protein_76 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| A6P55_RS25805 () | 71666..74581 | + | 2916 | WP_003049965.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| A6P55_RS25815 () | 74725..75317 | + | 593 | Protein_78 | FAD-dependent oxidoreductase | - |
| A6P55_RS25820 () | 75426..76971 | + | 1546 | Protein_79 | IS91 family transposase ISPps1 | Transposase |
| A6P55_RS26740 () | 77135..78422 | - | 1288 | Protein_80 | IS30 family transposase ISPa37 | Transposase |
| A6P55_RS26745 () | 78490..78775 | + | 286 | Protein_81 | IS3 family transposase | - |
| A6P55_RS25830 () | 78874..79176 | - | 303 | WP_063599767.1 | hypothetical protein | - |
| A6P55_RS25835 () | 79280..80658 | - | 1379 | Protein_83 | MFS transporter | - |
| A6P55_RS26750 () | 80679..81790 | - | 1112 | Protein_84 | oxidoreductase | - |
| A6P55_RS25845 () | 82399..83650 | - | 1252 | Protein_85 | Rieske 2Fe-2S domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|