MGE detailed information
MGE type: IS/Tn MGE length: 1026 bp
Accession: NZ_CP015281 Location: 4645473..4646498 Organism: Photorhabdus laumondii subsp. laumondii strain DSPV002N Replicon: chromosome
Accession: NZ_CP015281 Location: 4645473..4646498 Organism: Photorhabdus laumondii subsp. laumondii strain DSPV002N Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4R40_RS20350 () | 4641001..4642374 | + | 1374 | WP_109791821.1 | outer membrane channel protein TolC | - |
| A4R40_RS20355 () | 4642623..4643036 | - | 414 | WP_011148089.1 | DUF2628 domain-containing protein | - |
| A4R40_RS20360 () | 4643448..4644152 | + | 705 | WP_011148090.1 | DUF1190 family protein | - |
| A4R40_RS20365 () | 4644159..4645319 | + | 1161 | WP_109791822.1 | glutathionylspermidine synthase family protein | - |
| A4R40_RS20370 () | 4645473..4646498 | + | 1026 | WP_109791477.1 | IS630 family transposase ISPlu3 | Transposase |
| A4R40_RS20375 () | 4646889..4647137 | + | 249 | WP_036778328.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| A4R40_RS20380 () | 4647140..4647415 | + | 276 | WP_109791823.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A4R40_RS26175 () | 4647429..4647587 | - | 159 | WP_011148094.1 | hypothetical protein | - |
| A4R40_RS20385 () | 4647654..4648439 | - | 786 | WP_058589147.1 | 4,5-DOPA dioxygenase extradiol | - |
| A4R40_RS20390 () | 4648634..4649287 | - | 654 | WP_011148096.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| A4R40_RS20395 () | 4649747..4650037 | + | 291 | WP_058589148.1 | accessory factor UbiK family protein | - |
| A4R40_RS20400 () | 4650117..4650779 | - | 663 | WP_058589149.1 | DUF799 domain-containing protein | - |
| A4R40_RS20405 () | 4650776..4651135 | - | 360 | WP_109791824.1 | DUF4810 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Photorhabdus luminescens subsp. laumondii TTO1 | IS/Tn | TA21017 | NC_005126 | 4645475..4646500 | 0.001 |