MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110830 bp
Accession: NZ_CP015280 Location: 1..110830 Organism: Mycobacterium intracellulare subsp. chimaera strain DSM 44623 Replicon: plasmid unnamed 2
Accession: NZ_CP015280 Location: 1..110830 Organism: Mycobacterium intracellulare subsp. chimaera strain DSM 44623 Replicon: plasmid unnamed 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MYCODSM44623_RS28305 () | 459..1538 | + | 1080 | WP_007172361.1 | hypothetical protein | - |
| MYCODSM44623_RS29365 () | 1648..2319 | + | 672 | WP_139315441.1 | hypothetical protein | - |
| MYCODSM44623_RS29370 () | 2443..2715 | + | 273 | WP_139315440.1 | hypothetical protein | - |
| MYCODSM44623_RS29375 () | 2946..3377 | + | 432 | WP_139315439.1 | hypothetical protein | - |
| MYCODSM44623_RS28310 () | 4809..5711 | + | 903 | WP_074021534.1 | hypothetical protein | - |
| MYCODSM44623_RS28315 () | 5708..6430 | + | 723 | WP_023363510.1 | hypothetical protein | - |
| MYCODSM44623_RS28320 () | 6507..6645 | - | 139 | Protein_7 | type II toxin-antitoxin system VapC family toxin | - |
| MYCODSM44623_RS28325 () | 6751..8403 | - | 1653 | WP_040624340.1 | IS607 family transposase IS1535 | Transposase |
| MYCODSM44623_RS28330 () | 8403..8984 | - | 582 | WP_007172352.1 | IS607 family transposase IS1535 | Transposase |
| MYCODSM44623_RS28335 () | 9127..9900 | + | 774 | Protein_10 | IS256 family transposase IS2606 | Transposase |
| MYCODSM44623_RS28340 () | 9999..11051 | + | 1053 | WP_046183199.1 | IS91 family transposase ISCARN110 | Transposase |
| MYCODSM44623_RS28345 () | 11054..11371 | + | 318 | WP_046183198.1 | helix-turn-helix transcriptional regulator | - |
| MYCODSM44623_RS28350 () | 11374..12984 | + | 1611 | WP_046183197.1 | hypothetical protein | - |
| MYCODSM44623_RS28355 () | 13033..13635 | + | 603 | Protein_14 | IS256 family transposase IS2606 | Transposase |
| MYCODSM44623_RS28360 () | 13917..14333 | - | 417 | WP_040624374.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| MYCODSM44623_RS28365 () | 14336..14599 | - | 264 | WP_007172349.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| MYCODSM44623_RS28370 () | 14701..15675 | + | 975 | WP_023363505.1 | hypothetical protein | - |
| MYCODSM44623_RS28375 () | 15739..16842 | + | 1104 | WP_051404593.1 | hypothetical protein | - |
| MYCODSM44623_RS28380 () | 16928..17968 | + | 1041 | WP_023363502.1 | Murein DD-endopeptidase MepH | VF |
| MYCODSM44623_RS28385 () | 18082..19527 | + | 1446 | WP_101930849.1 | ESX-5 secretion system ATPase EccB5 | VF |
| MYCODSM44623_RS28390 () | 19524..23750 | + | 4227 | WP_007172344.1 | ESX-5 secretion system protein EccC5 | VF |
| MYCODSM44623_RS28395 () | 23844..24140 | + | 297 | WP_007172343.1 | PE family protein | - |
| MYCODSM44623_RS28400 () | 24170..25324 | + | 1155 | WP_007172342.1 | putative PPE family protein PPE51 | VF |
| MYCODSM44623_RS28405 () | 25468..25764 | + | 297 | WP_007172341.1 | WXG100 family type VII secretion target | - |
| MYCODSM44623_RS28410 () | 25809..26093 | + | 285 | WP_007172340.1 | ESAT-6-like protein EsxN | VF |
| MYCODSM44623_RS28415 () | 26172..27092 | + | 921 | WP_007172339.1 | ESX-5 secretion-associated protein EspG5 | VF |
| MYCODSM44623_RS28425 () | 28553..30196 | + | 1644 | WP_080674295.1 | ESX-5 secretion system protein EccD5 | VF |
| MYCODSM44623_RS28430 () | 30213..31913 | + | 1701 | WP_040624331.1 | Mycosin-5 | VF |
| MYCODSM44623_RS28435 () | 31913..33505 | + | 1593 | WP_007172335.1 | ESX-5 secretion system protein EccE5 | VF |
| MYCODSM44623_RS28440 () | 33528..35360 | + | 1833 | WP_007172334.1 | ESX-5 secretion system protein EccA5 | VF |
| MYCODSM44623_RS28445 () | 35368..35694 | + | 327 | WP_007172333.1 | hypothetical protein | - |
| MYCODSM44623_RS29695 () | 35846..35989 | + | 144 | WP_154074434.1 | hypothetical protein | - |
| MYCODSM44623_RS28455 () | 36023..38092 | - | 2070 | WP_007172331.1 | hypothetical protein | - |
| MYCODSM44623_RS28460 () | 38089..40539 | - | 2451 | WP_116671175.1 | ATP-binding protein | - |
| MYCODSM44623_RS28465 () | 41144..41428 | - | 285 | WP_007172329.1 | hypothetical protein | - |
| MYCODSM44623_RS28470 () | 41723..41950 | - | 228 | WP_007172327.1 | hypothetical protein | - |
| MYCODSM44623_RS28475 () | 41964..42890 | - | 927 | WP_007172326.1 | conjugal transfer protein | - |
| MYCODSM44623_RS28480 () | 42907..44121 | - | 1215 | WP_007172325.1 | hypothetical protein | - |
| MYCODSM44623_RS28485 () | 44118..44423 | - | 306 | WP_007172324.1 | hypothetical protein | - |
| MYCODSM44623_RS28490 () | 44522..44956 | + | 435 | WP_007172323.1 | hypothetical protein | - |
| MYCODSM44623_RS28495 () | 44940..45605 | + | 666 | WP_040624365.1 | hypothetical protein | - |
| MYCODSM44623_RS28500 () | 45608..47011 | + | 1404 | WP_007172321.1 | type IV secretory system conjugative DNA transfer family protein | - |
| MYCODSM44623_RS28505 () | 47008..47274 | + | 267 | WP_007172320.1 | hypothetical protein | - |
| MYCODSM44623_RS28510 () | 47620..48708 | + | 1089 | WP_074021350.1 | HD domain-containing protein | - |
| MYCODSM44623_RS28515 () | 48855..49271 | + | 417 | WP_139315438.1 | type IV secretion system protein VirD4 | - |
| MYCODSM44623_RS29700 () | 49264..49413 | + | 150 | WP_007172316.1 | hypothetical protein | - |
| MYCODSM44623_RS28520 () | 49493..50059 | + | 567 | WP_007172315.1 | hypothetical protein | - |
| MYCODSM44623_RS28535 () | 50882..51403 | + | 522 | WP_007172312.1 | hypothetical protein | - |
| MYCODSM44623_RS28540 () | 51471..52058 | + | 588 | WP_007172311.1 | hypothetical protein | - |
| MYCODSM44623_RS29385 () | 52055..53422 | + | 1368 | WP_023363493.1 | hypothetical protein | - |
| MYCODSM44623_RS28560 () | 53463..53735 | - | 273 | WP_040624325.1 | hypothetical protein | - |
| MYCODSM44623_RS28565 () | 53840..59698 | - | 5859 | WP_007172307.1 | Multifunctional conjugation protein TraI | Relaxase |
| MYCODSM44623_RS28570 () | 59953..60432 | + | 480 | WP_007172306.1 | hypothetical protein | - |
| MYCODSM44623_RS28575 () | 60521..61045 | + | 525 | WP_007172305.1 | hypothetical protein | - |
| MYCODSM44623_RS28580 () | 61402..62448 | - | 1047 | WP_007172304.1 | DUF945 domain-containing protein | - |
| MYCODSM44623_RS28585 () | 62866..63402 | - | 537 | WP_007172303.1 | hypothetical protein | - |
| MYCODSM44623_RS28590 () | 63499..63843 | - | 345 | WP_007172302.1 | hypothetical protein | - |
| MYCODSM44623_RS28595 () | 64261..65208 | - | 948 | WP_007172301.1 | DUF4192 domain-containing protein | - |
| MYCODSM44623_RS29705 () | 65630..65803 | - | 174 | WP_007172699.1 | hypothetical protein | - |
| MYCODSM44623_RS28600 () | 65838..66296 | - | 459 | WP_023363543.1 | hypothetical protein | - |
| MYCODSM44623_RS28605 () | 66717..67019 | - | 303 | WP_040624393.1 | hypothetical protein | - |
| MYCODSM44623_RS28610 () | 67102..67563 | - | 462 | WP_023363541.1 | hypothetical protein | - |
| MYCODSM44623_RS28615 () | 67985..68962 | - | 978 | WP_007172422.1 | DUF3560 domain-containing protein | - |
| MYCODSM44623_RS28620 () | 69083..69319 | - | 237 | WP_007172423.1 | hypothetical protein | - |
| MYCODSM44623_RS28625 () | 69868..70281 | - | 414 | WP_023363536.1 | hypothetical protein | - |
| MYCODSM44623_RS28630 () | 70311..70706 | - | 396 | WP_007172420.1 | hypothetical protein | - |
| MYCODSM44623_RS28635 () | 71114..71653 | - | 540 | WP_007172419.1 | hypothetical protein | - |
| MYCODSM44623_RS29710 () | 71992..72150 | + | 159 | WP_023363534.1 | hypothetical protein | - |
| MYCODSM44623_RS28640 () | 72126..72842 | - | 717 | WP_007172417.1 | hypothetical protein | - |
| MYCODSM44623_RS28645 () | 72866..73036 | - | 171 | WP_007172416.1 | hypothetical protein | - |
| MYCODSM44623_RS28650 () | 73033..74319 | - | 1287 | WP_007172415.1 | hypothetical protein | - |
| MYCODSM44623_RS28655 () | 74319..74612 | - | 294 | WP_007172414.1 | hypothetical protein | - |
| MYCODSM44623_RS28660 () | 74646..74879 | - | 234 | WP_007172413.1 | glutaredoxin-like protein NrdH | - |
| MYCODSM44623_RS28665 () | 75643..77289 | - | 1647 | WP_007172412.1 | ParB/RepB/Spo0J family partition protein | - |
| MYCODSM44623_RS28670 () | 77866..78078 | - | 213 | WP_007172410.1 | hypothetical protein | - |
| MYCODSM44623_RS28675 () | 78197..79297 | - | 1101 | WP_007172409.1 | tyrosine-type recombinase/integrase | - |
| MYCODSM44623_RS28680 () | 79287..79856 | - | 570 | WP_007172408.1 | hypothetical protein | - |
| MYCODSM44623_RS28685 () | 80189..80353 | + | 165 | Protein_78 | hypothetical protein | - |
| MYCODSM44623_RS28690 () | 80350..80613 | - | 264 | WP_007172605.1 | hypothetical protein | - |
| MYCODSM44623_RS28695 () | 80757..81119 | - | 363 | WP_129560167.1 | transposase | - |
| MYCODSM44623_RS28700 () | 81107..83476 | - | 2370 | WP_089150873.1 | copper-translocating P-type ATPase | - |
| MYCODSM44623_RS28705 () | 83532..83828 | - | 297 | WP_033718771.1 | DUF1490 family protein | - |
| MYCODSM44623_RS28710 () | 84057..86345 | - | 2289 | WP_033718775.1 | cadmium-translocating P-type ATPase | - |
| MYCODSM44623_RS28715 () | 86410..86706 | - | 297 | WP_033718759.1 | DUF1490 family protein | - |
| MYCODSM44623_RS28720 () | 86788..87144 | - | 357 | WP_007170255.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| MYCODSM44623_RS28725 () | 87216..88037 | - | 822 | WP_065018912.1 | hypothetical protein | - |
| MYCODSM44623_RS28730 () | 88117..89142 | - | 1026 | WP_007172501.1 | TniB family NTP-binding protein | - |
| MYCODSM44623_RS28735 () | 89130..91088 | - | 1959 | WP_033719466.1 | DDE-type integrase/transposase/recombinase | - |
| MYCODSM44623_RS28740 () | 91211..91951 | - | 741 | WP_099459185.1 | TnsA-like heteromeric transposase endonuclease subunit | - |
| MYCODSM44623_RS28745 () | 92534..93532 | + | 999 | WP_101930848.1 | hypothetical protein | - |
| MYCODSM44623_RS28750 () | 93549..93842 | + | 294 | WP_007172406.1 | hypothetical protein | - |
| MYCODSM44623_RS28755 () | 94057..94314 | - | 258 | WP_007172405.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| MYCODSM44623_RS28760 () | 94311..94595 | - | 285 | WP_007172404.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| MYCODSM44623_RS29395 () | 94677..95438 | - | 762 | WP_023363524.1 | hypothetical protein | - |
| MYCODSM44623_RS28770 () | 95441..96163 | - | 723 | WP_139315444.1 | ParA family protein | - |
| MYCODSM44623_RS28775 () | 96827..97720 | + | 894 | WP_052742716.1 | DUF2637 domain-containing protein | - |
| MYCODSM44623_RS28780 () | 97942..99462 | + | 1521 | WP_007172379.1 | DUF4226 domain-containing protein | - |
| MYCODSM44623_RS28785 () | 99490..99804 | + | 315 | WP_041321561.1 | hypothetical protein | - |
| MYCODSM44623_RS28790 () | 99880..100185 | + | 306 | WP_007172377.1 | hypothetical protein | - |
| MYCODSM44623_RS28795 () | 100202..101908 | + | 1707 | WP_023363520.1 | PPE domain-containing protein | - |
| MYCODSM44623_RS28800 () | 101905..102246 | + | 342 | WP_007172375.1 | hypothetical protein | - |
| MYCODSM44623_RS28805 () | 102359..103546 | - | 1188 | WP_007172374.1 | hypothetical protein | - |
| MYCODSM44623_RS28810 () | 103932..104348 | - | 417 | WP_007172373.1 | hypothetical protein | - |
| MYCODSM44623_RS28815 () | 104509..106371 | - | 1863 | WP_023363516.1 | helicase associated domain-containing protein | - |
| MYCODSM44623_RS28820 () | 106748..107032 | - | 285 | WP_007172369.1 | hypothetical protein | - |
| MYCODSM44623_RS29400 () | 106995..107585 | - | 591 | WP_023363514.1 | hypothetical protein | - |
| MYCODSM44623_RS28825 () | 107641..108078 | - | 438 | WP_007172368.1 | WhiB family transcriptional regulator | - |
| MYCODSM44623_RS28830 () | 108385..108891 | + | 507 | WP_007172367.1 | helix-turn-helix domain-containing protein | - |
| MYCODSM44623_RS28835 () | 108997..109248 | + | 252 | WP_040624378.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| MYCODSM44623_RS28840 () | 109245..109538 | + | 294 | WP_007172365.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| MYCODSM44623_RS28845 () | 109756..110463 | + | 708 | WP_139315443.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|