MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 175972 bp
Accession: NZ_CP015268 Location: 1..175972 Organism: Mycobacterium intracellulare subsp. chimaera strain ZUERICH-2 Replicon: plasmid unnamed 1
Accession: NZ_CP015268 Location: 1..175972 Organism: Mycobacterium intracellulare subsp. chimaera strain ZUERICH-2 Replicon: plasmid unnamed 1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MYCOZU2_RS28725 () | 53..376 | - | 324 | WP_192579513.1 | hypothetical protein | - |
| MYCOZU2_RS31400 () | 471..620 | - | 150 | WP_156181216.1 | hypothetical protein | - |
| MYCOZU2_RS31405 () | 613..912 | - | 300 | WP_052955336.1 | hypothetical protein | - |
| MYCOZU2_RS28735 () | 909..2321 | - | 1413 | WP_047323676.1 | type IV secretory system conjugative DNA transfer family protein | - |
| MYCOZU2_RS28740 () | 2324..2989 | - | 666 | WP_052955337.1 | hypothetical protein | - |
| MYCOZU2_RS28745 () | 2964..3398 | - | 435 | WP_052955338.1 | hypothetical protein | - |
| MYCOZU2_RS28750 () | 3498..3806 | + | 309 | WP_047323677.1 | hypothetical protein | - |
| MYCOZU2_RS28755 () | 3803..5038 | + | 1236 | WP_052955339.1 | hypothetical protein | - |
| MYCOZU2_RS28760 () | 5053..5976 | + | 924 | WP_047323678.1 | conjugal transfer protein | - |
| MYCOZU2_RS28765 () | 5985..6212 | + | 228 | WP_047323679.1 | hypothetical protein | - |
| MYCOZU2_RS28770 () | 6209..6493 | + | 285 | WP_047323680.1 | hypothetical protein | - |
| MYCOZU2_RS28775 () | 6566..9559 | + | 2994 | WP_047323681.1 | ATP-binding protein | - |
| MYCOZU2_RS28780 () | 9556..11646 | + | 2091 | WP_047323682.1 | hypothetical protein | - |
| MYCOZU2_RS28785 () | 11643..12041 | - | 399 | WP_047323683.1 | hypothetical protein | - |
| MYCOZU2_RS28790 () | 12122..12565 | - | 444 | WP_047323684.1 | hypothetical protein | - |
| MYCOZU2_RS28795 () | 12570..14402 | - | 1833 | WP_047323685.1 | hypothetical protein | VF |
| MYCOZU2_RS28800 () | 14424..16016 | - | 1593 | WP_047323686.1 | hypothetical protein | VF |
| MYCOZU2_RS28805 () | 16016..17737 | - | 1722 | WP_075630230.1 | hypothetical protein | VF |
| MYCOZU2_RS28810 () | 17752..19269 | - | 1518 | WP_082147688.1 | hypothetical protein | VF |
| MYCOZU2_RS28815 () | 19266..20774 | - | 1509 | WP_047324164.1 | MinD/ParA family protein | - |
| MYCOZU2_RS28820 () | 20901..21824 | - | 924 | WP_047324163.1 | hypothetical protein | VF |
| MYCOZU2_RS28825 () | 21906..22190 | - | 285 | WP_047324162.1 | hypothetical protein | VF |
| MYCOZU2_RS28830 () | 22234..22530 | - | 297 | WP_047324161.1 | WXG100 family type VII secretion target | - |
| MYCOZU2_RS28835 () | 22672..23832 | - | 1161 | WP_047324160.1 | PPE family protein | - |
| MYCOZU2_RS28840 () | 23857..24153 | - | 297 | WP_047324169.1 | PE family protein | - |
| MYCOZU2_RS28845 () | 24250..28461 | - | 4212 | WP_047324159.1 | hypothetical protein | VF |
| MYCOZU2_RS28850 () | 28458..29999 | - | 1542 | WP_082147687.1 | hypothetical protein | VF |
| MYCOZU2_RS28855 () | 30060..30965 | - | 906 | WP_139315451.1 | hypothetical protein | VF |
| MYCOZU2_RS28860 () | 31174..31791 | - | 618 | WP_085081455.1 | transglycosylase SLT domain-containing protein | - |
| MYCOZU2_RS28865 () | 32394..33227 | - | 834 | WP_074021485.1 | hypothetical protein | - |
| MYCOZU2_RS28870 () | 33475..33738 | + | 264 | WP_047324157.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| MYCOZU2_RS28875 () | 33744..34160 | + | 417 | WP_047324166.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| MYCOZU2_RS31005 () | 34680..37010 | - | 2331 | WP_139315450.1 | hypothetical protein | - |
| MYCOZU2_RS28885 () | 37680..37952 | - | 273 | WP_142274731.1 | hypothetical protein | - |
| MYCOZU2_RS31410 () | 38038..38181 | - | 144 | WP_167384289.1 | hypothetical protein | - |
| MYCOZU2_RS28890 () | 38187..38876 | - | 690 | WP_047324298.1 | hypothetical protein | - |
| MYCOZU2_RS28895 () | 38891..39592 | - | 702 | WP_136246450.1 | hypothetical protein | - |
| MYCOZU2_RS28900 () | 39835..41034 | + | 1200 | WP_174900762.1 | IS110 family transposase IS900 | Transposase |
| MYCOZU2_RS28905 () | 41059..42126 | - | 1068 | WP_192579514.1 | IS110 family transposase IS1547 | Transposase |
| MYCOZU2_RS28910 () | 42375..43436 | - | 1062 | WP_047323876.1 | hypothetical protein | - |
| MYCOZU2_RS28915 () | 43433..44056 | - | 624 | WP_158086686.1 | helix-turn-helix domain-containing protein | - |
| MYCOZU2_RS28920 () | 44246..44683 | + | 438 | WP_052955344.1 | WhiB family transcriptional regulator | - |
| MYCOZU2_RS28925 () | 44694..44978 | + | 285 | WP_047323878.1 | hypothetical protein | - |
| MYCOZU2_RS28930 () | 45307..45648 | - | 342 | WP_047323879.1 | hypothetical protein | - |
| MYCOZU2_RS28935 () | 45645..47354 | - | 1710 | WP_082147659.1 | PE family protein | - |
| MYCOZU2_RS28940 () | 47367..47672 | - | 306 | WP_047323881.1 | ESX-1 secretion-associated protein | - |
| MYCOZU2_RS28945 () | 47746..48051 | - | 306 | WP_133058051.1 | hypothetical protein | - |
| MYCOZU2_RS28950 () | 48079..49656 | - | 1578 | WP_052955345.1 | DUF4226 domain-containing protein | - |
| MYCOZU2_RS28955 () | 49793..50695 | - | 903 | WP_052955346.1 | DUF2637 domain-containing protein | - |
| MYCOZU2_RS28960 () | 51236..51949 | + | 714 | WP_047323883.1 | WhiB family transcriptional regulator | - |
| MYCOZU2_RS28965 () | 51954..53852 | + | 1899 | WP_047323884.1 | hypothetical protein | - |
| MYCOZU2_RS28970 () | 53860..54477 | - | 618 | WP_047323911.1 | hypothetical protein | - |
| MYCOZU2_RS28975 () | 54474..55442 | - | 969 | WP_047323885.1 | Iron-sulfur cluster carrier protein | VF |
| MYCOZU2_RS28980 () | 56730..57320 | - | 591 | WP_047323886.1 | helix-turn-helix domain-containing protein | - |
| MYCOZU2_RS31415 () | 57830..59026 | - | 1197 | WP_192579515.1 | hypothetical protein | - |
| MYCOZU2_RS28995 () | 59543..61153 | + | 1611 | WP_145958897.1 | transposase | - |
| MYCOZU2_RS29000 () | 61621..61863 | + | 243 | WP_052955347.1 | hypothetical protein | - |
| MYCOZU2_RS29005 () | 62054..62716 | + | 663 | WP_136246053.1 | hypothetical protein | - |
| MYCOZU2_RS29010 () | 62730..63068 | + | 339 | WP_047323890.1 | hypothetical protein | - |
| MYCOZU2_RS29020 () | 63682..64641 | - | 960 | WP_139315448.1 | hypothetical protein | - |
| MYCOZU2_RS29025 () | 64843..65463 | + | 621 | WP_082147662.1 | hypothetical protein | - |
| MYCOZU2_RS29030 () | 65519..66340 | - | 822 | WP_047323893.1 | hypothetical protein | - |
| MYCOZU2_RS29035 () | 66663..67100 | - | 438 | WP_082147663.1 | hypothetical protein | - |
| MYCOZU2_RS31015 () | 67322..67501 | - | 180 | WP_136246052.1 | hypothetical protein | - |
| MYCOZU2_RS29040 () | 67658..68194 | + | 537 | WP_047323913.1 | hypothetical protein | - |
| MYCOZU2_RS29045 () | 68392..69171 | - | 780 | WP_047323895.1 | SseB family protein | - |
| MYCOZU2_RS29050 () | 69398..69637 | - | 240 | WP_047323896.1 | hypothetical protein | - |
| MYCOZU2_RS29055 () | 69825..71381 | - | 1557 | WP_047323897.1 | ATP-binding protein | - |
| MYCOZU2_RS29060 () | 71637..73589 | - | 1953 | WP_047323898.1 | hypothetical protein | - |
| MYCOZU2_RS29065 () | 74036..74548 | - | 513 | WP_047323914.1 | hypothetical protein | - |
| MYCOZU2_RS31020 () | 75023..75658 | - | 636 | WP_136246050.1 | hypothetical protein | - |
| MYCOZU2_RS29080 () | 75762..76796 | - | 1035 | WP_074021058.1 | tyrosine-type recombinase/integrase | - |
| MYCOZU2_RS29085 () | 77152..77778 | + | 627 | WP_089150880.1 | TetR/AcrR family transcriptional regulator | - |
| MYCOZU2_RS29090 () | 77963..78172 | + | 210 | WP_047323903.1 | IS110 family transposase ISArsp3 | Transposase |
| MYCOZU2_RS31420 () | 78175..78351 | - | 177 | WP_156181225.1 | hypothetical protein | - |
| MYCOZU2_RS29095 () | 78749..79483 | - | 735 | WP_047323904.1 | TetR/AcrR family transcriptional regulator; helix-turn-helix transcriptional regulator | - |
| MYCOZU2_RS29100 () | 79498..80565 | - | 1068 | WP_192579516.1 | IS110 family transposase IS1547 | Transposase |
| MYCOZU2_RS29105 () | 81344..82753 | + | 1410 | WP_082147661.1 | MCE family protein | - |
| MYCOZU2_RS29110 () | 82780..82959 | + | 180 | WP_047323905.1 | hypothetical protein | - |
| MYCOZU2_RS29115 () | 83131..83769 | + | 639 | WP_047323906.1 | HTH-type transcriptional regulator BetI | VF |
| MYCOZU2_RS29120 () | 84064..85233 | + | 1170 | WP_082147712.1 | IS3 family transposase ISAar24 | Transposase |
| MYCOZU2_RS29125 () | 85317..86461 | + | 1145 | WP_089152512.1 | IS3 family transposase ISMyma1 | Transposase |
| MYCOZU2_RS29130 () | 86525..86857 | + | 333 | Protein_83 | IS630 family transposase ISMsm2 | Transposase |
| MYCOZU2_RS29135 () | 87048..87764 | - | 717 | WP_085164408.1 | enoyl-CoA hydratase/isomerase family protein | - |
| MYCOZU2_RS29140 () | 87936..89753 | - | 1818 | WP_162288420.1 | IS1182 family transposase ISNml3 | Transposase |
| MYCOZU2_RS29145 () | 89858..91060 | - | 1203 | WP_082147678.1 | cytochrome P450 | - |
| MYCOZU2_RS29150 () | 91308..92866 | + | 1559 | Protein_87 | OB-fold domain-containing protein | - |
| MYCOZU2_RS29155 () | 92834..93526 | - | 693 | WP_052955363.1 | TetR/AcrR family transcriptional regulator | - |
| MYCOZU2_RS29160 () | 93865..95070 | - | 1206 | WP_047324126.1 | cytochrome P450 | - |
| MYCOZU2_RS29165 () | 95273..95647 | + | 375 | WP_047324127.1 | nuclear transport factor 2 family protein | - |
| MYCOZU2_RS29170 () | 95651..98734 | - | 3084 | WP_082147679.1 | MMPL family transporter | - |
| MYCOZU2_RS29175 () | 99094..99792 | + | 699 | WP_052955364.1 | TetR/AcrR family transcriptional regulator | - |
| MYCOZU2_RS29185 () | 100516..101071 | - | 556 | Protein_93 | transposase | - |
| MYCOZU2_RS29190 () | 101075..101815 | + | 741 | WP_167380260.1 | TetR/AcrR family transcriptional regulator | - |
| MYCOZU2_RS29195 () | 102063..102215 | + | 153 | Protein_95 | IS110 family transposase | - |
| MYCOZU2_RS29205 () | 102858..104324 | + | 1467 | WP_089151684.1 | DDE-type integrase/transposase/recombinase | - |
| MYCOZU2_RS31425 () | 104759..105085 | - | 327 | WP_047324131.1 | hypothetical protein | - |
| MYCOZU2_RS29220 () | 106036..106445 | + | 410 | Protein_98 | anti-sigma factor antagonist | - |
| MYCOZU2_RS29225 () | 106505..107452 | + | 948 | WP_047324133.1 | hypothetical protein | VF |
| MYCOZU2_RS29235 () | 108446..109516 | - | 1071 | WP_192579510.1 | IS110 family transposase IS1547 | Transposase |
| MYCOZU2_RS29240 () | 109996..110921 | + | 926 | Protein_101 | class I SAM-dependent methyltransferase | - |
| MYCOZU2_RS29245 () | 110929..111162 | + | 234 | WP_192579511.1 | hypothetical protein | - |
| MYCOZU2_RS29250 () | 111936..112523 | + | 588 | WP_047322045.1 | hypothetical protein | - |
| MYCOZU2_RS29255 () | 112520..113185 | + | 666 | WP_047322046.1 | RES family NAD+ phosphorylase | - |
| MYCOZU2_RS29260 () | 113301..113570 | + | 270 | WP_047322047.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| MYCOZU2_RS29265 () | 113567..113848 | + | 282 | WP_052955269.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| MYCOZU2_RS29270 () | 114080..114937 | + | 858 | WP_089152514.1 | hypothetical protein | VF |
| MYCOZU2_RS31025 () | 115129..115362 | - | 234 | WP_047322049.1 | hypothetical protein | - |
| MYCOZU2_RS29275 () | 115451..115702 | + | 252 | WP_089152515.1 | hypothetical protein | - |
| MYCOZU2_RS29280 () | 115973..116632 | - | 660 | WP_136245930.1 | hypothetical protein | - |
| MYCOZU2_RS29285 () | 117940..119586 | + | 1647 | WP_074021311.1 | ParB N-terminal domain-containing protein | - |
| MYCOZU2_RS29290 () | 120306..120539 | + | 234 | WP_047323403.1 | glutaredoxin-like protein NrdH | - |
| MYCOZU2_RS29295 () | 120567..120860 | + | 294 | WP_052955321.1 | hypothetical protein | - |
| MYCOZU2_RS29300 () | 120860..122140 | + | 1281 | WP_047323402.1 | hypothetical protein | - |
| MYCOZU2_RS29305 () | 122137..122307 | + | 171 | WP_089150878.1 | amidohydrolase | - |
| MYCOZU2_RS29310 () | 122371..123048 | + | 678 | WP_089150881.1 | serine protease | - |
| MYCOZU2_RS31430 () | 123024..123191 | - | 168 | WP_156181200.1 | hypothetical protein | - |
| MYCOZU2_RS29315 () | 123640..124179 | + | 540 | WP_047323400.1 | hypothetical protein | - |
| MYCOZU2_RS29320 () | 124268..124594 | + | 327 | WP_074021438.1 | hypothetical protein | - |
| MYCOZU2_RS29325 () | 125011..125406 | + | 396 | WP_047323398.1 | hypothetical protein | - |
| MYCOZU2_RS29330 () | 125823..126158 | + | 336 | WP_047323397.1 | hypothetical protein | - |
| MYCOZU2_RS29335 () | 126578..127039 | + | 462 | WP_047323396.1 | hypothetical protein | - |
| MYCOZU2_RS29340 () | 127123..127458 | + | 336 | WP_047323395.1 | hypothetical protein | - |
| MYCOZU2_RS29345 () | 127878..128336 | + | 459 | WP_047323394.1 | hypothetical protein | - |
| MYCOZU2_RS31435 () | 128370..128546 | + | 177 | WP_156181198.1 | hypothetical protein | - |
| MYCOZU2_RS29350 () | 128960..129907 | + | 948 | WP_047323393.1 | DUF4192 domain-containing protein | - |
| MYCOZU2_RS29355 () | 130372..131418 | + | 1047 | WP_047323392.1 | DUF945 domain-containing protein | - |
| MYCOZU2_RS29360 () | 131774..132298 | - | 525 | WP_047323391.1 | hypothetical protein | - |
| MYCOZU2_RS29365 () | 132387..132878 | - | 492 | WP_074021723.1 | hypothetical protein | - |
| MYCOZU2_RS29370 () | 133142..139006 | + | 5865 | WP_083651537.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| MYCOZU2_RS29375 () | 139311..139496 | + | 186 | WP_047324259.1 | hypothetical protein | - |
| MYCOZU2_RS29380 () | 139636..139851 | + | 216 | WP_047324258.1 | hypothetical protein | - |
| MYCOZU2_RS29385 () | 139873..141534 | - | 1662 | Protein_133 | Serine/threonine-protein kinase PknD | VF |
| MYCOZU2_RS29390 () | 141597..143063 | - | 1467 | WP_089151684.1 | DDE-type integrase/transposase/recombinase | - |
| MYCOZU2_RS29395 () | 143116..143493 | - | 378 | Protein_135 | Serine/threonine-protein kinase PknD | VF |
| MYCOZU2_RS29400 () | 143501..144709 | - | 1209 | WP_047324256.1 | hypothetical protein | - |
| MYCOZU2_RS29405 () | 144706..145965 | - | 1260 | WP_047324255.1 | hypothetical protein | - |
| MYCOZU2_RS29410 () | 146001..146438 | - | 438 | WP_047324254.1 | hypothetical protein | - |
| MYCOZU2_RS29415 () | 146522..147283 | - | 762 | WP_158086685.1 | sensor domain-containing protein | - |
| MYCOZU2_RS29420 () | 147372..148427 | - | 1056 | WP_158090652.1 | sensor domain-containing protein | - |
| MYCOZU2_RS29425 () | 148805..149173 | + | 369 | WP_158086684.1 | WhiB family transcriptional regulator | - |
| MYCOZU2_RS29430 () | 149183..150022 | + | 840 | WP_047324250.1 | sensor domain-containing protein | - |
| MYCOZU2_RS29435 () | 150380..150661 | + | 282 | WP_052955331.1 | hypothetical protein | - |
| MYCOZU2_RS29440 () | 150767..151897 | - | 1131 | WP_158086677.1 | helix-turn-helix domain-containing protein | - |
| MYCOZU2_RS29445 () | 152502..152831 | + | 330 | WP_074020925.1 | DUF4333 domain-containing protein | - |
| MYCOZU2_RS29450 () | 152835..153200 | + | 366 | WP_047323669.1 | hypothetical protein | - |
| MYCOZU2_RS29455 () | 153295..154038 | - | 744 | WP_075630227.1 | sensor domain-containing protein | - |
| MYCOZU2_RS29460 () | 154543..155976 | - | 1434 | WP_192579512.1 | peptidase | - |
| MYCOZU2_RS29465 () | 156125..156445 | - | 321 | WP_074020928.1 | DUF4333 domain-containing protein | - |
| MYCOZU2_RS29470 () | 157161..158582 | - | 1422 | WP_074020920.1 | hypothetical protein | - |
| MYCOZU2_RS29475 () | 158579..159154 | - | 576 | WP_074020922.1 | hypothetical protein | - |
| MYCOZU2_RS31440 () | 159645..159809 | + | 165 | WP_158090643.1 | hypothetical protein | - |
| MYCOZU2_RS29485 () | 160137..160796 | + | 660 | WP_089150870.1 | TetR/AcrR family transcriptional regulator C-terminal domain-containing protein | - |
| MYCOZU2_RS29490 () | 161062..161754 | + | 693 | WP_074020839.1 | cutinase family protein | - |
| MYCOZU2_RS29495 () | 161823..162584 | + | 762 | WP_074020850.1 | GAF and ANTAR domain-containing protein | - |
| MYCOZU2_RS29500 () | 162665..163240 | + | 576 | WP_083600211.1 | class I SAM-dependent methyltransferase | - |
| MYCOZU2_RS29505 () | 163341..163748 | + | 408 | WP_074020835.1 | PAS domain-containing protein | - |
| MYCOZU2_RS29510 () | 164006..164512 | + | 507 | WP_074020833.1 | (3R)-hydroxyacyl-ACP dehydratase subunit HadA | - |
| MYCOZU2_RS29515 () | 164572..165831 | + | 1260 | WP_075630226.1 | hypothetical protein | VF |
| MYCOZU2_RS29520 () | 165837..166115 | + | 279 | WP_075630225.1 | hypothetical protein | - |
| MYCOZU2_RS29525 () | 166178..166549 | - | 372 | WP_074021471.1 | hypothetical protein | - |
| MYCOZU2_RS29530 () | 166621..168450 | - | 1830 | WP_139315453.1 | integrase | - |
| MYCOZU2_RS29535 () | 168732..170495 | - | 1764 | WP_074021475.1 | hypothetical protein | - |
| MYCOZU2_RS29540 () | 170492..171862 | - | 1371 | WP_089152517.1 | site-specific integrase | - |
| MYCOZU2_RS29545 () | 171958..173424 | + | 1467 | WP_089151684.1 | DDE-type integrase/transposase/recombinase | - |
| MYCOZU2_RS29550 () | 174017..175009 | + | 993 | WP_047323674.1 | Cardiolipin synthase A | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|