MGE detailed information
MGE type: Prophage MGE length: 32609 bp
Accession: NZ_CP015173 Location: 2542239..2574847 Organism: Staphylococcus aureus strain RIVM6519 Replicon: chromosome
Accession: NZ_CP015173 Location: 2542239..2574847 Organism: Staphylococcus aureus strain RIVM6519 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A5J11_RS12595 () | 2538052..2538798 | - | 747 | WP_078270787.1 | S9 family peptidase | - |
| A5J11_RS12600 () | 2538803..2539276 | - | 474 | WP_000672013.1 | nucleoside triphosphatase YtkD | - |
| A5J11_RS12605 () | 2539342..2539599 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| A5J11_RS12610 () | 2539596..2540597 | - | 1002 | WP_000778528.1 | o-succinylbenzoate synthase | - |
| A5J11_RS12615 () | 2540602..2542080 | - | 1479 | WP_000348364.1 | o-succinylbenzoate--CoA ligase | - |
| A5J11_RS12620 () | 2542239..2542694 | - | 456 | WP_012840523.1 | DUF4909 domain-containing protein | - |
| A5J11_RS12625 () | 2542997..2543647 | + | 651 | WP_001795210.1 | excalibur calcium-binding domain-containing protein | - |
| A5J11_RS12630 () | 2543728..2544723 | + | 996 | WP_000070642.1 | DUF4352 domain-containing protein | - |
| A5J11_RS12635 () | 2544798..2545424 | + | 627 | WP_000669024.1 | hypothetical protein | - |
| A5J11_RS12640 () | 2545465..2545806 | + | 342 | WP_000627540.1 | DUF3969 family protein | - |
| A5J11_RS12645 () | 2545907..2546479 | + | 573 | WP_000414216.1 | hypothetical protein | - |
| A5J11_RS14615 () | 2546677..2547689 | - | 1013 | Protein_2428 | IS3 family transposase ISClsp1 | Transposase |
| A5J11_RS14830 () | 2547834..2547929 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 2547957..2548014 | - | 58 | - | - | Antitoxin Detail |
| A5J11_RS12665 () | 2548052..2548153 | + | 102 | WP_001792025.1 | hypothetical protein | - |
| A5J11_RS14835 () | 2548131..2548292 | - | 162 | Protein_2431 | transposase | - |
| A5J11_RS12670 () | 2548283..2548777 | - | 495 | Protein_2432 | IS21 family transposase IS232 | Transposase |
| A5J11_RS12675 () | 2549229..2550458 | - | 1230 | WP_000072627.1 | restriction endonuclease subunit S | - |
| A5J11_RS12680 () | 2550451..2552007 | - | 1557 | WP_031862851.1 | type I restriction-modification system subunit M | - |
| A5J11_RS12685 () | 2552171..2552305 | - | 135 | WP_063125024.1 | hypothetical protein | - |
| A5J11_RS12690 () | 2552368..2553087 | - | 720 | WP_063125025.1 | Serine protease SplF | VF |
| A5J11_RS14840 () | 2553189..2553296 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| A5J11_RS12695 () | 2553245..2553964 | - | 720 | WP_001038704.1 | Serine protease SplD | VF |
| A5J11_RS12700 () | 2554085..2554804 | - | 720 | WP_001038872.1 | Serine protease SplC | VF |
| A5J11_RS12705 () | 2554862..2555584 | - | 723 | WP_001039454.1 | Serine protease SplB | VF |
| A5J11_RS12710 () | 2555709..2556416 | - | 708 | WP_001039427.1 | Serine protease SplA | VF |
| A5J11_RS12720 () | 2557380..2557961 | + | 582 | WP_001092780.1 | DUF4888 domain-containing protein | - |
| A5J11_RS12725 () | 2558434..2558722 | - | 289 | Protein_2443 | BsaG protein | - |
| A5J11_RS12730 () | 2558908..2559381 | + | 474 | WP_000550252.1 | hypothetical protein | - |
| A5J11_RS12735 () | 2559386..2560177 | + | 792 | WP_000543854.1 | DUF1828 domain-containing protein | - |
| A5J11_RS12740 () | 2560547..2561530 | - | 984 | WP_000782463.1 | Leucotoxin LukDv | VF |
| A5J11_RS12745 () | 2561532..2562467 | - | 936 | WP_000473596.1 | Leucotoxin LukEv | VF |
| A5J11_RS14885 () | 2563363..2563794 | + | 432 | Protein_2448 | hypothetical protein | - |
| A5J11_RS12755 () | 2563831..2564619 | + | 789 | WP_000206344.1 | DUF1828 domain-containing protein | - |
| A5J11_RS12760 () | 2565453..2565947 | + | 495 | WP_001253432.1 | hypothetical protein | - |
| A5J11_RS12765 () | 2566025..2566261 | + | 237 | WP_000617704.1 | hypothetical protein | - |
| A5J11_RS12770 () | 2566282..2567058 | + | 777 | WP_000848318.1 | DUF1828 domain-containing protein | - |
| A5J11_RS12775 () | 2567610..2568386 | - | 777 | WP_000736712.1 | Enterotoxin type G | VF |
| A5J11_RS12780 () | 2568669..2569424 | - | 756 | WP_001236362.1 | Enterotoxin type A | VF |
| A5J11_RS14845 () | 2569463..2570234 | - | 772 | Protein_2455 | Enterotoxin type C-2 | VF |
| A5J11_RS12795 () | 2570388..2571116 | - | 729 | WP_000713847.1 | Enterotoxin type A | VF |
| A5J11_RS12800 () | 2571151..2571870 | - | 720 | WP_000821658.1 | Enterotoxin type D | VF |
| A5J11_RS12805 () | 2572151..2572933 | - | 783 | WP_010922839.1 | Enterotoxin type D | VF |
| A5J11_RS12850 () | 2574293..2574847 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| A5J11_RS12860 () | 2575170..2576570 | - | 1401 | WP_000167542.1 | protoporphyrinogen oxidase | - |
| A5J11_RS12865 () | 2576594..2577517 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| A5J11_RS12870 () | 2577575..2578612 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| A5J11_RS12875 () | 2578602..2578712 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| A5J11_RS12880 () | 2578875..2579378 | + | 504 | WP_031862852.1 | signal transduction protein TRAP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA20384 | NC_002745 | 1850940..1883547 | 0 |